FFCP PHASE1:Mm9::chr2:174171818..174171834,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=989|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:174171818..174171834,+|id=chr2:174171818..174171834,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.08e-11!73;UBERON:0005743!1.08e-11!73;UBERON:0000073!3.58e-11!75;UBERON:0001016!3.58e-11!75;UBERON:0002346!1.48e-10!71;UBERON:0003075!1.48e-10!71;UBERON:0007284!1.48e-10!71;UBERON:0001049!2.18e-10!52;UBERON:0005068!2.18e-10!52;UBERON:0006241!2.18e-10!52;UBERON:0007135!2.18e-10!52;UBERON:0002616!3.15e-10!49;UBERON:0000955!5.67e-10!50;UBERON:0006238!5.67e-10!50;UBERON:0004121!1.13e-08!102;UBERON:0000924!1.13e-08!102;UBERON:0006601!1.13e-08!102;UBERON:0000033!6.22e-08!63;UBERON:0000025!2.26e-07!114;UBERON:0003080!6.39e-07!40;UBERON:0002780!7.80e-07!39;UBERON:0001890!7.80e-07!39;UBERON:0006240!7.80e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.83e-12,54;UBERON:0001017,1.87e-11,73;UBERON:0001016,5.67e-11,75;UBERON:0001049,1.64e-10,52;UBERON:0005068,1.64e-10,52;UBERON:0006241,1.64e-10,52;UBERON:0007135,1.64e-10,52;UBERON:0010314,3.40e-10,92;UBERON:0002616,6.74e-09,46;UBERON:0000955,2.29e-08,47;UBERON:0006238,2.29e-08,47;UBERON:0002346,3.29e-08,64;UBERON:0003075,3.29e-08,64;UBERON:0007284,3.29e-08,64;UBERON:0003080,7.75e-07,40;UBERON:0002780,9.66e-07,39;UBERON:0001890,9.66e-07,39;UBERON:0006240,9.66e-07,39|phase1_expression=0.80074423552397,0.348975407639361,0,0.90739263392049,0,0.16787927191189,0.233612640595526,0.387369970324729,1.267098499365,0,0.513653904676515,0.478632953972018,0.171200729931206,0.174840804837995,0.333109761815663,0.404950534779652,0,1.26184866143295,0.685572168028694,0.42438965179803,0.595303031057488,0.794327609607082,0.783599367416806,0.799962113967033,0.45881856213434,0.57423196411502,0.430761996159075,0.430942465371778,0.380046838912748,0,0,0,0,0,0.288851619751275,0,0.612508068787107,0,0,0,0,0,0,2.39203954153597,2.12891555560981,2.0190142737785,2.34717403304412,2.18025156380447,1.75748946187577,1.94429899074283,1.81982348112971,1.43752564364972,0.335565212115473,0.725362142011344,1.00828139742739,4.3734104126111,4.29800159908135,4.12537673821954,1.82084814773638,3.1739458756322,1.26766280701236,0.677689064138264,0,2.6996991518442,1.97773272513395,0,2.09720077362883,3.84218305321555,0.518448061542388,1.89008313664367,0.630974884054146,3.71346279724945,2.87129103237098,0.367472397644862,1.53352753629178,1.83843757322004,4.40463523997555,2.29837208553338,4.30098293117482,1.45074916503213,3.01909223887952,0.52091337055676,2.51264699101243,4.50210088025344,2.90316670775939,4.12480019663135,1.85083185038834,1.1183966749518,0.454357159999104,1.43585964202892,0.289864488701678,0.860423876981386,2.719885334831,0.539703191637817,0,0.448026887097336,0.561777680527007,2.38602451609281,2.59786004602869,3.18005617059306,0.563373679106722,1.28326477414318,0,0,1.73192832808971,2.02687892380079,2.02209778005913,0.5709193985953,0,1.7813056687779,2.77576522825817,3.04465478312141,3.45923245884088,3.3158980921577,2.82212897125692,0.628332956648377,0.741584903203122,1.87979163995885,0.884610551949874,2.26473589926373,0.883366073841574,2.42437626567611,1.86391761218122,2.63502717310392,2.51336048176146,0,0.958520996047362,0.599902730993408,0.381210681219194,1.64769703345305,0.915001205637253,0.628271760564322,1.91206752211504,1.02286182932132,3.1168206683934,2.43361894601636,1.42575109390443,1.7416975885413,1.26361379216837,0.631325567659422,1.04096354370163,0.919608417733892,1.80062129805349,1.65775299619287,0.95251098811859,1.40925092313335,1.40552586839593,1.29351685369508,1.07783996466421,0.567318240503458,0.879755620819744,1.53437012699302,1.39023624612799,1.39300866608867,0.823128545631774,1.19420560091096,0,0.257347907114715,0.852490498186778,0.828503090142008,1.40715635988658,1.44049649168812,1.89395788468168,1.57411385397923,1.23413690309903,2.55787339225449,1.07309360559848,1.86824547787471,1.81015834904829,1.47750717671186,0.729619285912702,1.02339991197733,1.53685080703735,0.671032093801859,1.47202963994889,1.3377599609307,0,0.528901133327089,1.06644125267617,2.55460339046482,1.15980715189884,1.61346819698674,0.22237804384487,2.66315876557583,0.949058123089023,1.15289268306808,0.502670417600539,1.39269530428806,0.779856348476481,0,0.864552199498777,0.199141273254367,2.46568271239006,2.39921876480431,0,2.64746726198909,2.71533482034676,1.61312385747733,0.69560190836683,1.03327103585722,1.41298855057237,1.48076596706161,0.296452627087149,0.667380422864376,0.589676985339609,0.674586337154561,0.405720242777006,0.72353147925725,0.50925170356284,1.43848068725405,0.486405680325106,0.274561413188081,4.31304619582064,1.48856379067401,0,0.505157755894224,1.07638448113147,0.482443521363367,1.10851914099963,0.947457058852424,1.79261474086228,3.39490171550376,2.34690248288502,1.50755631697634,2.38043640886014,1.56106918286239,1.10344600874334,1.99318220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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=989 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:174171818..174171834,+ | |||
|description=CAGE_peak_at_chr2:174171818..174171834,+ | |||
|id=chr2:174171818..174171834,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.08e-11!73;UBERON:0005743!1.08e-11!73;UBERON:0000073!3.58e-11!75;UBERON:0001016!3.58e-11!75;UBERON:0002346!1.48e-10!71;UBERON:0003075!1.48e-10!71;UBERON:0007284!1.48e-10!71;UBERON:0001049!2.18e-10!52;UBERON:0005068!2.18e-10!52;UBERON:0006241!2.18e-10!52;UBERON:0007135!2.18e-10!52;UBERON:0002616!3.15e-10!49;UBERON:0000955!5.67e-10!50;UBERON:0006238!5.67e-10!50;UBERON:0004121!1.13e-08!102;UBERON:0000924!1.13e-08!102;UBERON:0006601!1.13e-08!102;UBERON:0000033!6.22e-08!63;UBERON:0000025!2.26e-07!114;UBERON:0003080!6.39e-07!40;UBERON:0002780!7.80e-07!39;UBERON:0001890!7.80e-07!39;UBERON:0006240!7.80e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.83e-12,54;UBERON:0001017,1.87e-11,73;UBERON:0001016,5.67e-11,75;UBERON:0001049,1.64e-10,52;UBERON:0005068,1.64e-10,52;UBERON:0006241,1.64e-10,52;UBERON:0007135,1.64e-10,52;UBERON:0010314,3.40e-10,92;UBERON:0002616,6.74e-09,46;UBERON:0000955,2.29e-08,47;UBERON:0006238,2.29e-08,47;UBERON:0002346,3.29e-08,64;UBERON:0003075,3.29e-08,64;UBERON:0007284,3.29e-08,64;UBERON:0003080,7.75e-07,40;UBERON:0002780,9.66e-07,39;UBERON:0001890,9.66e-07,39;UBERON:0006240,9.66e-07,39 | |||
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| |||
|short_description=p@chr2:174171818..174171834,+ | |||
}} |
Latest revision as of 16:35, 4 August 2015
Short description: | p@chr2:174171818..174171834, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:174171818..174171834, + |
Coexpression cluster: | MCL_coexpression_mm9:989 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 6.83e-12 | 54 |
central nervous system | 1.87e-11 | 73 |
nervous system | 5.67e-11 | 75 |
neural tube | 1.64e-10 | 52 |
neural rod | 1.64e-10 | 52 |
future spinal cord | 1.64e-10 | 52 |
neural keel | 1.64e-10 | 52 |
structure with developmental contribution from neural crest | 3.40e-10 | 92 |
regional part of brain | 6.74e-09 | 46 |
brain | 2.29e-08 | 47 |
future brain | 2.29e-08 | 47 |
neurectoderm | 3.29e-08 | 64 |
neural plate | 3.29e-08 | 64 |
presumptive neural plate | 3.29e-08 | 64 |
anterior neural tube | 7.75e-07 | 40 |
regional part of forebrain | 9.66e-07 | 39 |
forebrain | 9.66e-07 | 39 |
future forebrain | 9.66e-07 | 39 |