FFCP PHASE1:Mm9::chr10:75300058..75300077,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=17|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:75300058..75300077,-|id=chr10:75300058..75300077,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000084,6.15e-07,11;CL:0000827,6.15e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!6.37e-09!23;UBERON:0000974!6.37e-09!23;UBERON:0004807!6.37e-09!23;UBERON:0005058!6.37e-09!23;UBERON:0003351!6.37e-09!23;UBERON:0009113!6.37e-09!23;UBERON:0003295!6.37e-09!23;UBERON:0009722!6.37e-09!23;UBERON:0005562!6.37e-09!23;UBERON:0007690!6.37e-09!23;UBERON:0004177!1.62e-08!29;UBERON:0006562!2.59e-08!24;UBERON:0003408!2.59e-08!24;UBERON:0001557!2.59e-08!24;UBERON:0001042!2.59e-08!24;UBERON:0008814!2.59e-08!24;UBERON:0009145!2.59e-08!24;UBERON:0002368!1.27e-07!60;UBERON:0002530!5.81e-07!65;UBERON:0000072!8.76e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.13e-18,23;UBERON:0000974,2.13e-18,23;UBERON:0004807,2.13e-18,23;UBERON:0005058,2.13e-18,23;UBERON:0003351,2.13e-18,23;UBERON:0009113,2.13e-18,23;UBERON:0003295,2.13e-18,23;UBERON:0009722,2.13e-18,23;UBERON:0005562,2.13e-18,23;UBERON:0007690,2.13e-18,23;UBERON:0006562,1.42e-17,24;UBERON:0003408,1.42e-17,24;UBERON:0001557,1.42e-17,24;UBERON:0001042,1.42e-17,24;UBERON:0008814,1.42e-17,24;UBERON:0009145,1.42e-17,24;UBERON:0000072,1.82e-15,27;UBERON:0004177,2.64e-14,29;UBERON:0005057,2.64e-14,29;UBERON:0000077,3.09e-14,35;UBERON:0007811,3.01e-11,36;UBERON:0003929,3.31e-10,55;UBERON:0000065,1.06e-09,41;UBERON:0001004,1.95e-09,42;UBERON:0002368,3.35e-09,60;UBERON:0000153,3.50e-09,43;UBERON:0002390,1.04e-08,45;UBERON:0003061,1.04e-08,45;UBERON:0002530,2.38e-08,65;UBERON:0000490,3.41e-08,66;UBERON:0002193,4.47e-08,48;UBERON:0002405,4.47e-08,48;UBERON:0005911,9.34e-08,69;UBERON:0000949,2.35e-07,72|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,1.12630977721333,1.17032263160997,0,0.398860794976682,0,0,0,0,0,0,0,0,3.57181818634493,1.48936426801328,2.35079810225042,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0.418531630736908,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0,0,0,0,0,0.140444420131752,0,0.779358013808606,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0.304465478312141,0.230615497256059,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0.130120442962704,0.689706313300419,0,0.150704817835715,0.136072998302656,0.12811372028485,0,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0.102904612379284,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,1.1270773567308,0,0,0,0.126473074248515,0.147610147979602,0,0,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.658196082408484,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0.474503990371703,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,11.837551712368,0.149516546043979,0,0.194451188344048,0.645799117388655,0.337912250981556,0.352071715937262,0.13020438484395,0.104859344425711,14.9782154912124,10.9451402377989,1.58005560314089,0,0.205421914329655,0.25984164595559,0.895133478337407,1.19208812868759,0.721172697119813,1.32920574457119,2.1202954489111,1.06689529317,2.11734988787365,0.779663045918019,1.25075394132428,1.05189211963412,0,0,0.0897138566094757,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.290692833264657,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr10:75300058..75300077,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=17 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:75300058..75300077,- | |||
|description=CAGE_peak_at_chr10:75300058..75300077,- | |||
|id=chr10:75300058..75300077,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,6.15e-07,11;CL:0000827,6.15e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!6.37e-09!23;UBERON:0000974!6.37e-09!23;UBERON:0004807!6.37e-09!23;UBERON:0005058!6.37e-09!23;UBERON:0003351!6.37e-09!23;UBERON:0009113!6.37e-09!23;UBERON:0003295!6.37e-09!23;UBERON:0009722!6.37e-09!23;UBERON:0005562!6.37e-09!23;UBERON:0007690!6.37e-09!23;UBERON:0004177!1.62e-08!29;UBERON:0006562!2.59e-08!24;UBERON:0003408!2.59e-08!24;UBERON:0001557!2.59e-08!24;UBERON:0001042!2.59e-08!24;UBERON:0008814!2.59e-08!24;UBERON:0009145!2.59e-08!24;UBERON:0002368!1.27e-07!60;UBERON:0002530!5.81e-07!65;UBERON:0000072!8.76e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.13e-18,23;UBERON:0000974,2.13e-18,23;UBERON:0004807,2.13e-18,23;UBERON:0005058,2.13e-18,23;UBERON:0003351,2.13e-18,23;UBERON:0009113,2.13e-18,23;UBERON:0003295,2.13e-18,23;UBERON:0009722,2.13e-18,23;UBERON:0005562,2.13e-18,23;UBERON:0007690,2.13e-18,23;UBERON:0006562,1.42e-17,24;UBERON:0003408,1.42e-17,24;UBERON:0001557,1.42e-17,24;UBERON:0001042,1.42e-17,24;UBERON:0008814,1.42e-17,24;UBERON:0009145,1.42e-17,24;UBERON:0000072,1.82e-15,27;UBERON:0004177,2.64e-14,29;UBERON:0005057,2.64e-14,29;UBERON:0000077,3.09e-14,35;UBERON:0007811,3.01e-11,36;UBERON:0003929,3.31e-10,55;UBERON:0000065,1.06e-09,41;UBERON:0001004,1.95e-09,42;UBERON:0002368,3.35e-09,60;UBERON:0000153,3.50e-09,43;UBERON:0002390,1.04e-08,45;UBERON:0003061,1.04e-08,45;UBERON:0002530,2.38e-08,65;UBERON:0000490,3.41e-08,66;UBERON:0002193,4.47e-08,48;UBERON:0002405,4.47e-08,48;UBERON:0005911,9.34e-08,69;UBERON:0000949,2.35e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0.258246646883153,1.12630977721333,1.17032263160997,0,0.398860794976682,0,0,0,0,0,0,0,0,3.57181818634493,1.48936426801328,2.35079810225042,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0.418531630736908,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0,0,0,0,0,0.140444420131752,0,0.779358013808606,0,0,0,0,0,0,0,0,0.22836775943812,0,0.29688427812965,0,0.304465478312141,0.230615497256059,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0.130120442962704,0.689706313300419,0,0.150704817835715,0.136072998302656,0.12811372028485,0,0,0.215567992932842,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0.102904612379284,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0.189667900953082,0.342745537829186,1.1270773567308,0,0,0,0.126473074248515,0.147610147979602,0,0,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0.658196082408484,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0.138199973804424,0,0.474503990371703,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0,0,0.129614973291793,0,11.837551712368,0.149516546043979,0,0.194451188344048,0.645799117388655,0.337912250981556,0.352071715937262,0.13020438484395,0.104859344425711,14.9782154912124,10.9451402377989,1.58005560314089,0,0.205421914329655,0.25984164595559,0.895133478337407,1.19208812868759,0.721172697119813,1.32920574457119,2.1202954489111,1.06689529317,2.11734988787365,0.779663045918019,1.25075394132428,1.05189211963412,0,0,0.0897138566094757,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0,0,0,0.320919209591815,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.290692833264657,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr10:75300058..75300077,- | |||
}} |
Latest revision as of 16:53, 4 August 2015
Short description: | p@chr10:75300058..75300077, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:75300058..75300077, - |
Coexpression cluster: | MCL_coexpression_mm9:17 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 6.15e-07 | 11 |
pro-T cell | 6.15e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.13e-18 | 23 |
neck | 2.13e-18 | 23 |
respiratory system epithelium | 2.13e-18 | 23 |
hemolymphoid system gland | 2.13e-18 | 23 |
pharyngeal epithelium | 2.13e-18 | 23 |
thymic region | 2.13e-18 | 23 |
pharyngeal gland | 2.13e-18 | 23 |
entire pharyngeal arch endoderm | 2.13e-18 | 23 |
thymus primordium | 2.13e-18 | 23 |
early pharyngeal endoderm | 2.13e-18 | 23 |
pharynx | 1.42e-17 | 24 |
gland of gut | 1.42e-17 | 24 |
upper respiratory tract | 1.42e-17 | 24 |
chordate pharynx | 1.42e-17 | 24 |
pharyngeal arch system | 1.42e-17 | 24 |
pharyngeal region of foregut | 1.42e-17 | 24 |
segment of respiratory tract | 1.82e-15 | 27 |
hemopoietic organ | 2.64e-14 | 29 |
immune organ | 2.64e-14 | 29 |
mixed endoderm/mesoderm-derived structure | 3.09e-14 | 35 |
craniocervical region | 3.01e-11 | 36 |
gut epithelium | 3.31e-10 | 55 |
respiratory tract | 1.06e-09 | 41 |
respiratory system | 1.95e-09 | 42 |
endocrine gland | 3.35e-09 | 60 |
anterior region of body | 3.50e-09 | 43 |
hematopoietic system | 1.04e-08 | 45 |
blood island | 1.04e-08 | 45 |
gland | 2.38e-08 | 65 |
unilaminar epithelium | 3.41e-08 | 66 |
hemolymphoid system | 4.47e-08 | 48 |
immune system | 4.47e-08 | 48 |
endo-epithelium | 9.34e-08 | 69 |
endocrine system | 2.35e-07 | 72 |