FFCP PHASE1:Mm9::chr1:130485932..130485944,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=67|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:130485932..130485944,-|id=chr1:130485932..130485944,-|ontology_enrichment_celltype=CL:0002031!3.23e-11!25;CL:0000988!4.74e-11!32;CL:0002032!4.74e-11!32;CL:0000037!4.74e-11!32;CL:0000566!4.74e-11!32;CL:0000837!4.74e-11!32;CL:0000738!4.35e-09!17;CL:0002087!4.35e-09!17;CL:0002320!8.66e-08!46;CL:0000134!8.66e-08!46;CL:0000219!6.96e-07!54|ontology_enrichment_celltype_v019_2=CL:0002092,6.83e-19,3;CL:0002540,6.83e-19,3;CL:0002194,4.66e-14,4;CL:0000766,4.66e-14,4;CL:0000234,4.66e-14,4;CL:0000576,4.66e-14,4;CL:0000235,4.66e-14,4;CL:0000864,4.66e-14,4;CL:0002009,4.66e-14,4;CL:0000040,4.66e-14,4;CL:0000559,4.66e-14,4;CL:0002476,2.42e-13,2;CL:0002320,1.42e-09,46;CL:0000134,1.42e-09,46;CL:0000738,8.01e-09,17;CL:0002087,8.01e-09,17;CL:0000473,2.90e-08,7;CL:0000557,2.90e-08,7;CL:0002031,2.91e-08,25;CL:0000219,5.39e-08,54;CL:0000945,1.38e-07,1;CL:0000236,1.38e-07,1;CL:0000826,1.38e-07,1;CL:0000839,1.70e-07,13;CL:0000034,2.53e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!2.24e-16!48;UBERON:0002390!3.33e-16!45;UBERON:0003061!3.33e-16!45;UBERON:0002371!2.42e-11!16;UBERON:0001474!1.60e-10!22;UBERON:0004765!1.60e-10!22;UBERON:0001434!1.60e-10!22;UBERON:0002405!1.68e-09!70;UBERON:0002204!5.04e-09!32;UBERON:0003081!4.21e-08!88;UBERON:0002384!8.66e-08!46;UBERON:0004177!5.80e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.91e-18,16;UBERON:0001474,1.67e-16,22;UBERON:0004765,1.67e-16,22;UBERON:0001434,1.67e-16,22;UBERON:0002204,4.90e-14,32;UBERON:0002384,1.42e-09,46|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.703943610758334,0.70219357896598,0,0,0.684802919724823,0.699363219351979,0.333109761815663,0.809901069559304,0.699561878128147,0.315462165358238,1.23402990245165,0.42438965179803,0.17008658030214,0.595745707205312,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,0.7813353445238,0.523523743973798,2.94115744015507,2.04913645487534,0,0,0,0,0,0,0.219686182734472,0,0.279972843250725,0,5.03347818173209,2.17608642603403,0.336093799142464,0.257259436035947,0,0,0,1.05798195854407,0,0,0,3.5995988691256,2.96659908770092,2.1314403448383,0.898800331555214,1.15265491596466,0.103689612308478,0.270011876663381,0,0.571301968807607,0.220868540951614,0.244981598429908,0.0958454710182364,0.919218786610021,0,0,0,0,0.182975287204819,0,0,0,0,0,0.427115042397309,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0.517875767294343,0.148442139064825,0.520455980298408,0.608930956624282,0,0.452167921657868,0.352766121407114,0.125666591329675,0,0,1.76922110389975,0,0.441683036920787,0.484875253135222,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.373220911830279,0,0.210441855886474,0,0,0,0.30140963567143,0.272145996605311,0.384341160854549,0.0937017245597288,0,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0,0.205809224758569,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.664394068946325,0.159454768657487,0.163863314715738,0.172684981865896,0,18.0949540727127,2.71952841909355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0,0.120625849856312,0.119372344003136,0,0.582961673259701,0,0.170870880797853,0,0.185194527369712,0.376736914009382,0.27338845544205,0.686334519619568,0.679913719975421,1.39951452323658,0.552799895217695,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0.632022241256357,0,0.308132871494482,0.51968329191118,0,0,0.480781798079875,0.590758108698309,0.403865799792591,0.381034033274999,0.504130925684203,0.877120926657772,0.865906574762965,0.818138315270983,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr1:130485932..130485944,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=67 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:130485932..130485944,- | |||
|description=CAGE_peak_at_chr1:130485932..130485944,- | |||
|id=chr1:130485932..130485944,- | |||
|ontology_enrichment_celltype=CL:0002031!3.23e-11!25;CL:0000988!4.74e-11!32;CL:0002032!4.74e-11!32;CL:0000037!4.74e-11!32;CL:0000566!4.74e-11!32;CL:0000837!4.74e-11!32;CL:0000738!4.35e-09!17;CL:0002087!4.35e-09!17;CL:0002320!8.66e-08!46;CL:0000134!8.66e-08!46;CL:0000219!6.96e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,6.83e-19,3;CL:0002540,6.83e-19,3;CL:0002194,4.66e-14,4;CL:0000766,4.66e-14,4;CL:0000234,4.66e-14,4;CL:0000576,4.66e-14,4;CL:0000235,4.66e-14,4;CL:0000864,4.66e-14,4;CL:0002009,4.66e-14,4;CL:0000040,4.66e-14,4;CL:0000559,4.66e-14,4;CL:0002476,2.42e-13,2;CL:0002320,1.42e-09,46;CL:0000134,1.42e-09,46;CL:0000738,8.01e-09,17;CL:0002087,8.01e-09,17;CL:0000473,2.90e-08,7;CL:0000557,2.90e-08,7;CL:0002031,2.91e-08,25;CL:0000219,5.39e-08,54;CL:0000945,1.38e-07,1;CL:0000236,1.38e-07,1;CL:0000826,1.38e-07,1;CL:0000839,1.70e-07,13;CL:0000034,2.53e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.24e-16!48;UBERON:0002390!3.33e-16!45;UBERON:0003061!3.33e-16!45;UBERON:0002371!2.42e-11!16;UBERON:0001474!1.60e-10!22;UBERON:0004765!1.60e-10!22;UBERON:0001434!1.60e-10!22;UBERON:0002405!1.68e-09!70;UBERON:0002204!5.04e-09!32;UBERON:0003081!4.21e-08!88;UBERON:0002384!8.66e-08!46;UBERON:0004177!5.80e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,9.91e-18,16;UBERON:0001474,1.67e-16,22;UBERON:0004765,1.67e-16,22;UBERON:0001434,1.67e-16,22;UBERON:0002204,4.90e-14,32;UBERON:0002384,1.42e-09,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.703943610758334,0.70219357896598,0,0,0.684802919724823,0.699363219351979,0.333109761815663,0.809901069559304,0.699561878128147,0.315462165358238,1.23402990245165,0.42438965179803,0.17008658030214,0.595745707205312,0.783599367416806,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,2.09265815368454,0.7813353445238,0.523523743973798,2.94115744015507,2.04913645487534,0,0,0,0,0,0,0.219686182734472,0,0.279972843250725,0,5.03347818173209,2.17608642603403,0.336093799142464,0.257259436035947,0,0,0,1.05798195854407,0,0,0,3.5995988691256,2.96659908770092,2.1314403448383,0.898800331555214,1.15265491596466,0.103689612308478,0.270011876663381,0,0.571301968807607,0.220868540951614,0.244981598429908,0.0958454710182364,0.919218786610021,0,0,0,0,0.182975287204819,0,0,0,0,0,0.427115042397309,0.186399445825301,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0.517875767294343,0.148442139064825,0.520455980298408,0.608930956624282,0,0.452167921657868,0.352766121407114,0.125666591329675,0,0,1.76922110389975,0,0.441683036920787,0.484875253135222,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0.125654352112864,0,0,0,0,0.101839363850316,0.373220911830279,0,0.210441855886474,0,0,0,0.30140963567143,0.272145996605311,0.384341160854549,0.0937017245597288,0,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0.219550115291051,0.134206418760372,0,0.205809224758569,0,0.264450566663544,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0,0,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0.184753190166605,0,0.325929952884052,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.664394068946325,0.159454768657487,0.163863314715738,0.172684981865896,0,18.0949540727127,2.71952841909355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0,0.120625849856312,0.119372344003136,0,0.582961673259701,0,0.170870880797853,0,0.185194527369712,0.376736914009382,0.27338845544205,0.686334519619568,0.679913719975421,1.39951452323658,0.552799895217695,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0.134864346384821,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0,0,0,0,0,0,0.632022241256357,0,0.308132871494482,0.51968329191118,0,0,0.480781798079875,0.590758108698309,0.403865799792591,0.381034033274999,0.504130925684203,0.877120926657772,0.865906574762965,0.818138315270983,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr1:130485932..130485944,- | |||
}} |
Latest revision as of 17:29, 4 August 2015
Short description: | p@chr1:130485932..130485944, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:130485932..130485944, - |
Coexpression cluster: | MCL_coexpression_mm9:67 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 6.83e-19 | 3 |
mesenchymal stem cell of the bone marrow | 6.83e-19 | 3 |
monopoietic cell | 4.66e-14 | 4 |
myeloid leukocyte | 4.66e-14 | 4 |
phagocyte | 4.66e-14 | 4 |
monocyte | 4.66e-14 | 4 |
macrophage | 4.66e-14 | 4 |
tissue-resident macrophage | 4.66e-14 | 4 |
macrophage dendritic cell progenitor | 4.66e-14 | 4 |
monoblast | 4.66e-14 | 4 |
promonocyte | 4.66e-14 | 4 |
bone marrow macrophage | 2.42e-13 | 2 |
connective tissue cell | 1.42e-09 | 46 |
mesenchymal cell | 1.42e-09 | 46 |
leukocyte | 8.01e-09 | 17 |
nongranular leukocyte | 8.01e-09 | 17 |
defensive cell | 2.90e-08 | 7 |
granulocyte monocyte progenitor cell | 2.90e-08 | 7 |
hematopoietic lineage restricted progenitor cell | 2.91e-08 | 25 |
motile cell | 5.39e-08 | 54 |
lymphocyte of B lineage | 1.38e-07 | 1 |
B cell | 1.38e-07 | 1 |
pro-B cell | 1.38e-07 | 1 |
myeloid lineage restricted progenitor cell | 1.70e-07 | 13 |
stem cell | 2.53e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 9.91e-18 | 16 |
bone element | 1.67e-16 | 22 |
skeletal element | 1.67e-16 | 22 |
skeletal system | 1.67e-16 | 22 |
musculoskeletal system | 4.90e-14 | 32 |
connective tissue | 1.42e-09 | 46 |