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FFCP PHASE1:Mm9::chr17:34999191..34999297,-: Difference between revisions

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{{FFCP|EntrezGene=14962|HGNC=|MCL_coexpression_id=12|UniProt=B8JJM6|association_with_transcript=-73bp_to_ENSMUST00000154526_5end|description=CAGE_peak_3_at_Cfb_5end|id=chr17:34999191..34999297,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.42e-18!130;UBERON:0000925!3.42e-18!130;UBERON:0006595!3.42e-18!130;UBERON:0005409!4.83e-18!59;UBERON:0001007!5.78e-18!128;UBERON:0001555!5.78e-18!128;UBERON:0007026!5.78e-18!128;UBERON:0004921!7.15e-17!126;UBERON:0004185!7.15e-17!126;UBERON:0000160!4.21e-15!43;UBERON:0004923!2.14e-10!24;UBERON:0000344!2.69e-09!15;UBERON:0005172!6.57e-09!49;UBERON:0005173!6.57e-09!49;UBERON:0002417!6.57e-09!49;UBERON:0000916!6.57e-09!49;UBERON:0002365!1.28e-08!25;UBERON:0002330!1.28e-08!25;UBERON:0001242!3.48e-08!13;UBERON:0000060!3.48e-08!13;UBERON:0001262!3.48e-08!13;UBERON:0004786!3.48e-08!13;UBERON:0009854!5.00e-08!23;UBERON:0009856!5.00e-08!23;UBERON:0002107!1.51e-07!22;UBERON:0007499!1.51e-07!22;UBERON:0006925!1.51e-07!22;UBERON:0009497!1.51e-07!22;UBERON:0000015!1.51e-07!22;UBERON:0002423!1.51e-07!22;UBERON:0006235!1.51e-07!22;UBERON:0008835!1.51e-07!22;UBERON:0003894!1.51e-07!22;UBERON:0004161!1.51e-07!22;UBERON:0008836!1.51e-07!22;UBERON:0009569!1.97e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.97e-20,47;UBERON:0000160,2.76e-18,31;UBERON:0004119,8.27e-18,118;UBERON:0000925,8.27e-18,118;UBERON:0006595,8.27e-18,118;UBERON:0001007,1.39e-17,116;UBERON:0001555,1.39e-17,116;UBERON:0007026,1.39e-17,116;UBERON:0004921,1.95e-16,114;UBERON:0004923,2.48e-11,24;UBERON:0000344,4.08e-10,15;UBERON:0002365,2.29e-09,25;UBERON:0002330,2.29e-09,25;UBERON:0001242,6.91e-09,13;UBERON:0001262,6.91e-09,13;UBERON:0004786,6.91e-09,13;UBERON:0009854,1.03e-08,23;UBERON:0009856,1.03e-08,23;UBERON:0005172,1.35e-08,49;UBERON:0005173,1.35e-08,49;UBERON:0002417,1.35e-08,49;UBERON:0000916,1.35e-08,49;UBERON:0002107,3.50e-08,22;UBERON:0007499,3.50e-08,22;UBERON:0006925,3.50e-08,22;UBERON:0009497,3.50e-08,22;UBERON:0000015,3.50e-08,22;UBERON:0002423,3.50e-08,22;UBERON:0006235,3.50e-08,22;UBERON:0008835,3.50e-08,22;UBERON:0003894,3.50e-08,22;UBERON:0004161,3.50e-08,22;UBERON:0008836,3.50e-08,22;UBERON:0005177,1.42e-07,79;UBERON:0009569,4.79e-07,66;UBERON:0002100,6.32e-07,90|phase1_expression=0,30.7098358722638,27.2999543633722,16.030603199262,12.0214975187123,19.3061162698673,17.7545606852599,0,0,0,0,0,0,0,1.99865857089398,1.41732687172878,0.699561878128147,0.473193248037357,0.137114433605739,0,10.6304112688837,0.397163804803541,0.261199789138935,17.5991665072747,26.3820673227246,28.137366241636,25.8457197695445,26.7184328530502,43.8954098944224,28.4794046628722,26.6076612786366,0,0,0,6.35473563452804,8.31173226792462,8.37094360675713,0.837063261473815,1.5626706890476,0,0,0.683045484958446,0,6.92432498865675,8.92116994731728,1.46837401729345,0,0,0.219686182734472,0.388859798148567,0.979904951377538,0,0.335565212115473,0,0,0.514518872071894,0.286533439938757,0.515672092277442,0,0.528990979272033,0,0,0,6.74924787961049,10.8775299882367,10.6572017241915,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.182975287204819,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.151452386666368,0.302286240427142,5.50742528533188,5.16254326188832,3.39985666853875,4.31762553310254,9.09686984426737,6.72040330646003,7.44355426698285,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0.253359865475099,0,8.90634261808668,19.9382170408322,2.07818994690755,0.520455980298408,0.913396434936424,2.53677046981664,1.65794904607885,2.58695155698551,1.50799909595611,37.3264401278905,10.9895511259133,3.5384422077995,1.45590164952668,2.42925670306433,1.45462575940567,16.775258509631,0.292780797011547,0,25.034791410442,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0,0,0,0,1.83310854930569,2.36373244159177,3.28539585963777,1.89397670297827,0.130120442962704,0,0.180062129805349,0.60281927134286,1.02054748726992,1.15302348256365,1.59292931751539,0.776110112217047,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,1.02891068203972,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0.590292695242212,0,0.465067889500816,0.268273401399619,0.233530684734339,0.822799249567402,0.32833492815819,0.810688095458557,0.584799949701329,2.41505126820156,1.8788898626452,0,0.102904612379284,26.4335026387038,25.1228038330367,1.49301775374664,1.39342003116263,6.44337306610467,11.8993279527772,13.3426826306922,23.5879776379573,17.5575752771469,32.6103930353542,30.9142306824331,29.8434708061726,28.4647567193915,27.8634016682809,27.0172562343368,18.9184209591649,0.379335801906163,0.685491075658373,2.25415471346161,1.4255592949172,1.55161989734101,2.52488951605147,8.47369597465048,9.88987991463334,9.41992367048249,8.26760998276064,7.70776830426587,2.8363667971736,2.16214894624523,2.24862112384854,4.05720242777006,6.75296047306767,8.40265310878685,12.3709339103849,9.890248833277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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:14962
|HGNC=
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=uniprot:B8JJM6
|association_with_transcript=-73bp_to_ENSMUST00000154526_5end
|cluster_id=chr17:34999191..34999297,-
|description=CAGE_peak_3_at_Cfb_5end
|id=chr17:34999191..34999297,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!3.42e-18!130;UBERON:0000925!3.42e-18!130;UBERON:0006595!3.42e-18!130;UBERON:0005409!4.83e-18!59;UBERON:0001007!5.78e-18!128;UBERON:0001555!5.78e-18!128;UBERON:0007026!5.78e-18!128;UBERON:0004921!7.15e-17!126;UBERON:0004185!7.15e-17!126;UBERON:0000160!4.21e-15!43;UBERON:0004923!2.14e-10!24;UBERON:0000344!2.69e-09!15;UBERON:0005172!6.57e-09!49;UBERON:0005173!6.57e-09!49;UBERON:0002417!6.57e-09!49;UBERON:0000916!6.57e-09!49;UBERON:0002365!1.28e-08!25;UBERON:0002330!1.28e-08!25;UBERON:0001242!3.48e-08!13;UBERON:0000060!3.48e-08!13;UBERON:0001262!3.48e-08!13;UBERON:0004786!3.48e-08!13;UBERON:0009854!5.00e-08!23;UBERON:0009856!5.00e-08!23;UBERON:0002107!1.51e-07!22;UBERON:0007499!1.51e-07!22;UBERON:0006925!1.51e-07!22;UBERON:0009497!1.51e-07!22;UBERON:0000015!1.51e-07!22;UBERON:0002423!1.51e-07!22;UBERON:0006235!1.51e-07!22;UBERON:0008835!1.51e-07!22;UBERON:0003894!1.51e-07!22;UBERON:0004161!1.51e-07!22;UBERON:0008836!1.51e-07!22;UBERON:0009569!1.97e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.97e-20,47;UBERON:0000160,2.76e-18,31;UBERON:0004119,8.27e-18,118;UBERON:0000925,8.27e-18,118;UBERON:0006595,8.27e-18,118;UBERON:0001007,1.39e-17,116;UBERON:0001555,1.39e-17,116;UBERON:0007026,1.39e-17,116;UBERON:0004921,1.95e-16,114;UBERON:0004923,2.48e-11,24;UBERON:0000344,4.08e-10,15;UBERON:0002365,2.29e-09,25;UBERON:0002330,2.29e-09,25;UBERON:0001242,6.91e-09,13;UBERON:0001262,6.91e-09,13;UBERON:0004786,6.91e-09,13;UBERON:0009854,1.03e-08,23;UBERON:0009856,1.03e-08,23;UBERON:0005172,1.35e-08,49;UBERON:0005173,1.35e-08,49;UBERON:0002417,1.35e-08,49;UBERON:0000916,1.35e-08,49;UBERON:0002107,3.50e-08,22;UBERON:0007499,3.50e-08,22;UBERON:0006925,3.50e-08,22;UBERON:0009497,3.50e-08,22;UBERON:0000015,3.50e-08,22;UBERON:0002423,3.50e-08,22;UBERON:0006235,3.50e-08,22;UBERON:0008835,3.50e-08,22;UBERON:0003894,3.50e-08,22;UBERON:0004161,3.50e-08,22;UBERON:0008836,3.50e-08,22;UBERON:0005177,1.42e-07,79;UBERON:0009569,4.79e-07,66;UBERON:0002100,6.32e-07,90
|phase1_expression=0,30.7098358722638,27.2999543633722,16.030603199262,12.0214975187123,19.3061162698673,17.7545606852599,0,0,0,0,0,0,0,1.99865857089398,1.41732687172878,0.699561878128147,0.473193248037357,0.137114433605739,0,10.6304112688837,0.397163804803541,0.261199789138935,17.5991665072747,26.3820673227246,28.137366241636,25.8457197695445,26.7184328530502,43.8954098944224,28.4794046628722,26.6076612786366,0,0,0,6.35473563452804,8.31173226792462,8.37094360675713,0.837063261473815,1.5626706890476,0,0,0.683045484958446,0,6.92432498865675,8.92116994731728,1.46837401729345,0,0,0.219686182734472,0.388859798148567,0.979904951377538,0,0.335565212115473,0,0,0.514518872071894,0.286533439938757,0.515672092277442,0,0.528990979272033,0,0,0,6.74924787961049,10.8775299882367,10.6572017241915,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.182975287204819,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0.186399445825301,0.151452386666368,0.302286240427142,5.50742528533188,5.16254326188832,3.39985666853875,4.31762553310254,9.09686984426737,6.72040330646003,7.44355426698285,0,0,0,0.704217098883403,0,0,0,0.216491041011214,0.253359865475099,0,8.90634261808668,19.9382170408322,2.07818994690755,0.520455980298408,0.913396434936424,2.53677046981664,1.65794904607885,2.58695155698551,1.50799909595611,37.3264401278905,10.9895511259133,3.5384422077995,1.45590164952668,2.42925670306433,1.45462575940567,16.775258509631,0.292780797011547,0,25.034791410442,0,0,0.127070227073065,0.149790639404823,0,0.125654352112864,0,0,0,0,1.83310854930569,2.36373244159177,3.28539585963777,1.89397670297827,0.130120442962704,0,0.180062129805349,0.60281927134286,1.02054748726992,1.15302348256365,1.59292931751539,0.776110112217047,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,1.02891068203972,0,0,0,0,0,0.234526059981096,0,0.473489471170421,0.590292695242212,0,0.465067889500816,0.268273401399619,0.233530684734339,0.822799249567402,0.32833492815819,0.810688095458557,0.584799949701329,2.41505126820156,1.8788898626452,0,0.102904612379284,26.4335026387038,25.1228038330367,1.49301775374664,1.39342003116263,6.44337306610467,11.8993279527772,13.3426826306922,23.5879776379573,17.5575752771469,32.6103930353542,30.9142306824331,29.8434708061726,28.4647567193915,27.8634016682809,27.0172562343368,18.9184209591649,0.379335801906163,0.685491075658373,2.25415471346161,1.4255592949172,1.55161989734101,2.52488951605147,8.47369597465048,9.88987991463334,9.41992367048249,8.26760998276064,7.70776830426587,2.8363667971736,2.16214894624523,2.24862112384854,4.05720242777006,6.75296047306767,8.40265310878685,12.3709339103849,9.89024883327716,13.7280706594041,10.0637744569148,18.6070473834252,15.601883655728,5.30415643688935,6.99649912735457,8.20153986317724,10.5309318394965,0,0.162964976442026,0,0.234690248288502,0.502518772325447,1.19021820443007,2.14647012643579,3.15270288212382,3.32197034473162,2.39182152986231,6.55453258862952,6.90739927463582,7.5217510462386,7.53956419696361,49.4954172275026,8.35999264132362,13.2449638226272,0.321101179975584,0,0,2.7771801992481,0,0,0,0,0,0,0,0,0,0,5.53566332312248,2.67098405500883,1.30309567482861,20.1263550026493,2.65490276679926,0,0.906970670894253,0.377210159511796,0.295301892880773,2.15204603560749,5.42699415653264,5.08947221268508,5.34746067577082,3.16036757935816,4.21674434299995,5.15677716240934,1.36175842301515,0.36012218806262,0.388076051348264,0,0.532020700926821,0.356737635204141,0.164549020602121,0.913394847343798,2.11204537257339,2.33015277950202,1.10264199027481,5.93590510589328,0.645857706783622,1.93001359770099,1.55184047204077,1.64140899745061,30.3140070095045,0,7.51831875510552,1.65109494370578,4.07427960213366,2.63715839806567,5.19438065339896,6.86334519619568,0,0,0,2.86401185404534,0.474503990371703,0.813277868507395,3.78018692876304,5.22720740036172,6.76923947613151,9.03591120778299,8.26534557253359,3.14107130380836,18.146096260851,5.59205381778233,0,0,0,0.388902376688095,0.387479470433193,0.168956125490778,0.58678619322877,0.39061315453185,0.314578033277133,0.241584120826006,0.288030006257865,2.8441000856536,0.202725215290164,0.513554785824136,0.389762468933385,0.537080087002444,1.19208812868759,2.16351809135944,1.47689527174577,0.605798699688886,0.914481679859998,1.10908803650525,1.55932609183604,1.44317762460494,1.40252282617883,0.906921534460845,0,0,0,11.5913756419314,18.2052001187647,86.0812634056146,13.5052078819811,1.50471631210609,0,0,0,0,0,0,0,0,0,0,0,0,1.02440163452481,1.21553358534147,0.419226325255965,1.47074806760011,2.66696073361938,2.06035057238894,2.24643446714271,3.53776096469316,2.28131369901216,2.26351609663291,2.06011316433741,2.30490548657529,2.81433797882505,2.85776214769844,2.0859178670074,1.35036454324594,2.88460130562315,1.91358596174717,4.4573002810104,1.95223386775271,1.66905332963125,2.32554266611726,2.35273451038327,2.96151127620868,2.37806364734604,2.63069711437843,2.30866993537965,3.92799590160417,2.01679530811096,2.46261205938909,4.09231043169689,2.63392630016142,2.70069255373598,1.74867404556562,3.27504251823572,3.65280791882107,2.48674831689496,2.8676884485537,3.01428186306548
|short_description=p3@Cfb
}}

Revision as of 18:11, 4 August 2015

Short description:p3@Cfb
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cfb_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: -73bp_to_ENSMUST00000154526_5end
EntrezGene:14962
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Cfb

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I530.71
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I627.30
CD326+ enterocyte, pool1.CNhs13542.11848-124I316.03
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I719.31
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.75
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.63
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.40
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D117.60
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D226.38
GP2+ M cell, pool1.CNhs13228.11845-124H928.14
GP2+ M cell, pool2.CNhs13231.11846-124I125.85
GP2+ M cell, pool3.CNhs13240.11847-124I226.72
Ileum epithelium, pool1.CNhs13199.10252-104B943.90
Ileum epithelium, pool2.CNhs13232.10253-104C128.48
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C826.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.35
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F68.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D86.92
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.92
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C76.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D210.66
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.32
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.10
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B68.91
accessory axillary lymph node, adult.CNhs10475.1063-29H919.94
adrenal gland, adult.CNhs10508.49-24D72.08
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F51.66
adrenal gland, neonate N00.CNhs11191.1311-23C12.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.51
amnion, adult pregnant day17.5.CNhs10488.583-22A837.33
aorta, adult.CNhs10498.46-23H110.99
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H725.03
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.36
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.02
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.81
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D32.42
heart, neonate N30.CNhs11202.1390-42D21.88
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I326.43
intestine, adult.CNhs10496.178-9A325.12
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D86.44
intestine, embryo E16.CNhs10585.463-22H411.90
intestine, embryo E17.CNhs10582.482-18D313.34
intestine, embryo E18.CNhs10526.1289-20F723.59
intestine, neonate N00.CNhs11126.644-26D117.56
intestine, neonate N01.CNhs11192.1322-23E932.61
intestine, neonate N06.CNhs11102.688-20B830.91
intestine, neonate N07.CNhs11095.720-20F229.84
intestine, neonate N10.CNhs11098.755-23A528.46
intestine, neonate N20.CNhs11187.827-18D127.86
intestine, neonate N25.CNhs11121.1352-25E327.02
intestine, neonate N30.CNhs11131.1384-42G118.92
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G72.52
kidney, neonate N10.CNhs11206.758-6D58.47
kidney, neonate N20.CNhs11113.832-19I19.89
kidney, neonate N25.CNhs11122.1353-25F39.42
kidney, neonate N30.CNhs11203.1385-42H18.27
liver, adult pregnant day01.CNhs10466.508-5B27.71
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D74.06
liver, embryo E16.CNhs10523.462-17F56.75
liver, embryo E17.CNhs10510.481-18A38.40
liver, embryo E18.CNhs10579.499-43G412.37
liver, neonate N00.CNhs11117.641-24F49.89
liver, neonate N03.CNhs11123.1345-25G213.73
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H218.61
liver, neonate N10.CNhs11115.751-24B915.60
liver, neonate N20.CNhs11220.823-25A35.30
liver, neonate N25.CNhs11198.1368-26H17.00
liver, neonate N30.CNhs11106.1382-42D18.20
lung, adult.CNhs10474.28-22B110.53
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C62.15
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E62.39
lung, neonate N20.CNhs11109.822-18A46.55
lung, neonate N25.CNhs11119.1359-25C76.91
lung, neonate N30.CNhs11133.1394-42H27.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A149.50
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H213.24
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I75.54
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I41.30
oviduct, adult pregnant day01.CNhs10500.988-6G620.13
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G95.43
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B63.16
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C35.94
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.93
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I130.31
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G27.52
spleen, embryo E16.CNhs11035.461-43C11.65
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H15.19
spleen, neonate N25.CNhs11099.1354-25G36.86
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D43.78
stomach, embryo E17.CNhs11006.1035-18D55.23
stomach, embryo E18.CNhs10999.1286-20C66.77
stomach, neonate N03.CNhs11193.1340-24B89.04
stomach, neonate N07.CNhs11210.718-18A98.27
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I118.15
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B52.84
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F82.16
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E41.11
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G71.44
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E411.59
uterus, adult pregnant day19.CNhs10497.590-15F518.21
uterus, adult.CNhs10509.92-27E586.08
vagina, adult.CNhs10502.89-27D513.51
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.30
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.46
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.33
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.96
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B33.28
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C62.49
whole body, neonate N06.CNhs10515.692-21D12.87
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gastrointestinal system7.97e-2047
intestine2.76e-1831
endoderm-derived structure8.27e-18118
endoderm8.27e-18118
presumptive endoderm8.27e-18118
digestive system1.39e-17116
digestive tract1.39e-17116
primitive gut1.39e-17116
subdivision of digestive tract1.95e-16114
organ component layer2.48e-1124
mucosa4.08e-1015
exocrine gland2.29e-0925
exocrine system2.29e-0925
intestinal mucosa6.91e-0913
wall of intestine6.91e-0913
gastrointestinal system mucosa6.91e-0913
digestive tract diverticulum1.03e-0823
sac1.03e-0823
abdomen element1.35e-0849
abdominal segment element1.35e-0849
abdominal segment of trunk1.35e-0849
abdomen1.35e-0849
liver3.50e-0822
epithelial sac3.50e-0822
digestive gland3.50e-0822
epithelium of foregut-midgut junction3.50e-0822
anatomical boundary3.50e-0822
hepatobiliary system3.50e-0822
foregut-midgut junction3.50e-0822
hepatic diverticulum3.50e-0822
liver primordium3.50e-0822
septum transversum3.50e-0822
liver bud3.50e-0822
trunk region element1.42e-0779
subdivision of trunk4.79e-0766
trunk6.32e-0790
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