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FFCP PHASE1:Mm9::chr7:25689403..25689430,+: Difference between revisions

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{{FFCP|EntrezGene=16801|HGNC=|MCL_coexpression_id=33|UniProt=Q61210|association_with_transcript=0bp_to_ENSMUST00000117419_5end|description=CAGE_peak_3_at_Arhgef1_5end|id=chr7:25689403..25689430,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006562!9.04e-11!24;UBERON:0001557!9.04e-11!24;UBERON:0001042!9.04e-11!24;UBERON:0008814!9.04e-11!24;UBERON:0009145!9.04e-11!24;UBERON:0002370!1.68e-10!23;UBERON:0000974!1.68e-10!23;UBERON:0004807!1.68e-10!23;UBERON:0005058!1.68e-10!23;UBERON:0003351!1.68e-10!23;UBERON:0009113!1.68e-10!23;UBERON:0003295!1.68e-10!23;UBERON:0009722!1.68e-10!23;UBERON:0005562!1.68e-10!23;UBERON:0007690!1.68e-10!23;UBERON:0000063!1.70e-10!35;UBERON:0000072!2.98e-10!27;UBERON:0003408!4.21e-10!24;UBERON:0004177!1.69e-09!29;UBERON:0003929!3.58e-09!55;UBERON:0005911!5.25e-09!69;UBERON:0000065!6.87e-09!41;UBERON:0001004!1.07e-08!42;UBERON:0000077!1.28e-08!97;UBERON:0005057!1.35e-08!51;UBERON:0001041!4.82e-07!92;UBERON:0000064!9.65e-07!99|ontology_enrichment_uberon_v019_2=UBERON:0000077,1.69e-11,35;UBERON:0006562,9.04e-11,24;UBERON:0001557,9.04e-11,24;UBERON:0001042,9.04e-11,24;UBERON:0008814,9.04e-11,24;UBERON:0009145,9.04e-11,24;UBERON:0002370,1.68e-10,23;UBERON:0000974,1.68e-10,23;UBERON:0004807,1.68e-10,23;UBERON:0005058,1.68e-10,23;UBERON:0003351,1.68e-10,23;UBERON:0009113,1.68e-10,23;UBERON:0003295,1.68e-10,23;UBERON:0009722,1.68e-10,23;UBERON:0005562,1.68e-10,23;UBERON:0007690,1.68e-10,23;UBERON:0000072,2.98e-10,27;UBERON:0003408,4.21e-10,24;UBERON:0004177,1.69e-09,29;UBERON:0005057,1.69e-09,29;UBERON:0003929,3.58e-09,55;UBERON:0005911,5.25e-09,69;UBERON:0000065,6.87e-09,41;UBERON:0001004,1.07e-08,42;UBERON:0000153,3.71e-08,43;UBERON:0001041,2.55e-07,80;UBERON:0007811,8.59e-07,36|phase1_expression=1.92178616525753,5.58360652222978,2.72999543633722,9.67885476181856,10.5188103288733,6.71517087647559,4.90586545250604,32.7973241541604,5.06839399746,4.21316147379588,5.82141091966717,5.10541817570153,22.0848941611255,33.307173321638,7.99463428357591,6.47920855647443,9.09430441566591,11.8298312009339,9.46089591879598,11.8829102503448,4.16712121740242,10.8227136808965,6.52999472847338,4.63978026100879,4.35877634027623,4.01962374880514,3.4460959692726,4.30942465371778,4.94060890586572,2.77233142735924,3.99114919179548,8.89042942843484,11.6862309641068,0,4.62162591602039,3.65716219788683,3.87921776898501,2.51118978442145,3.1253413780952,1.0470474879476,3.52938892818609,2.04913645487534,1.94204141212461,2.01434908760924,2.93993100536592,3.85448179539531,4.69434806608824,3.70642765846759,1.75748946187577,2.72201858703997,2.37976916763116,2.87505128729943,13.4226084846189,31.1905721064878,18.4851589528355,3.08711323243136,2.29226751951005,5.15672092277442,4.04632921719196,2.64495489636016,3.80298842103708,5.42151251310611,5.33576877666684,1.3498495759221,1.97773272513395,2.8419204597844,2.39680088414724,6.14749288514487,4.35496371695606,4.18518408828241,3.78584930432488,5.42736870367227,4.41737081903227,2.44981598429908,4.02550978276593,1.83843757322004,3.30347642998166,4.34136949489638,2.91852413186863,3.69281605644543,2.56165402086747,2.6045668527838,5.02529398202486,5.06486349028512,4.88954392885792,2.65165726926301,2.84743361598206,3.54158947068071,3.48340489332647,1.43585964202892,4.92769630792852,1.72084775396277,3.39985666853875,8.09554787456726,7.79731700937203,8.06448396775204,3.08977724289854,4.09032774187339,2.07828803682295,4.24007489412408,2.11265129665021,8.98285341900225,10.1922095882658,7.11066703153331,4.11332977921307,5.57391704045217,5.05524445014783,2.96878087269556,12.1700805314171,3.71105347662062,5.89850111004862,2.13125834818499,3.68984795609694,3.3158980921577,3.76283862834255,3.26733137457156,5.93267922562497,2.31358971071859,3.5384422077995,8.25010934731787,6.40440403535141,10.6672555689749,3.72783522436244,7.61230072230023,7.33063473847093,5.10914110417183,3.11519323715393,1.19980546198682,1.52484272487678,9.43681028250383,4.57500602818627,4.90051973240171,5.73620256634512,7.16003280524926,4.77912502486988,7.62533936418461,3.1570202793598,4.72746488318353,3.53811861807145,6.52369753248069,3.77349284591841,2.5289231487682,2.88099407688559,4.06903008156431,6.5995404176788,4.09963904911519,7.02762934197966,6.46758426847539,6.25147179505242,5.8622884852024,7.03804496655795,5.47989331068937,4.72680323683516,8.00979983000983,6.99659263787008,5.57295947091781,1.40442637462647,2.57347907114715,3.12579849335152,3.72826390563903,3.28336483973535,2.88099298337624,4.49814997611899,4.9191057936851,3.08534225774756,1.62773761325285,2.68273401399619,3.03589890154641,3.29119699826961,2.95501435342371,4.13450928683864,2.92399974850665,2.63460138349261,4.2946054003319,5.25724871410318,4.6307075570678,6.27795687669216,4.7601101999438,2.77274725695804,3.0190767341857,4.51036114627327,4.63872106633688,3.33567065767305,3.42406127002606,4.2707615539006,3.78807595865225,3.01602250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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:16801
|HGNC=
|MCL_coexpression_id=33
|TSSclassifier=NA
|UniProt=uniprot:Q61210
|association_with_transcript=0bp_to_ENSMUST00000117419_5end
|cluster_id=chr7:25689403..25689430,+
|description=CAGE_peak_3_at_Arhgef1_5end
|id=chr7:25689403..25689430,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0006562!9.04e-11!24;UBERON:0001557!9.04e-11!24;UBERON:0001042!9.04e-11!24;UBERON:0008814!9.04e-11!24;UBERON:0009145!9.04e-11!24;UBERON:0002370!1.68e-10!23;UBERON:0000974!1.68e-10!23;UBERON:0004807!1.68e-10!23;UBERON:0005058!1.68e-10!23;UBERON:0003351!1.68e-10!23;UBERON:0009113!1.68e-10!23;UBERON:0003295!1.68e-10!23;UBERON:0009722!1.68e-10!23;UBERON:0005562!1.68e-10!23;UBERON:0007690!1.68e-10!23;UBERON:0000063!1.70e-10!35;UBERON:0000072!2.98e-10!27;UBERON:0003408!4.21e-10!24;UBERON:0004177!1.69e-09!29;UBERON:0003929!3.58e-09!55;UBERON:0005911!5.25e-09!69;UBERON:0000065!6.87e-09!41;UBERON:0001004!1.07e-08!42;UBERON:0000077!1.28e-08!97;UBERON:0005057!1.35e-08!51;UBERON:0001041!4.82e-07!92;UBERON:0000064!9.65e-07!99
|ontology_enrichment_uberon_v019_2=UBERON:0000077,1.69e-11,35;UBERON:0006562,9.04e-11,24;UBERON:0001557,9.04e-11,24;UBERON:0001042,9.04e-11,24;UBERON:0008814,9.04e-11,24;UBERON:0009145,9.04e-11,24;UBERON:0002370,1.68e-10,23;UBERON:0000974,1.68e-10,23;UBERON:0004807,1.68e-10,23;UBERON:0005058,1.68e-10,23;UBERON:0003351,1.68e-10,23;UBERON:0009113,1.68e-10,23;UBERON:0003295,1.68e-10,23;UBERON:0009722,1.68e-10,23;UBERON:0005562,1.68e-10,23;UBERON:0007690,1.68e-10,23;UBERON:0000072,2.98e-10,27;UBERON:0003408,4.21e-10,24;UBERON:0004177,1.69e-09,29;UBERON:0005057,1.69e-09,29;UBERON:0003929,3.58e-09,55;UBERON:0005911,5.25e-09,69;UBERON:0000065,6.87e-09,41;UBERON:0001004,1.07e-08,42;UBERON:0000153,3.71e-08,43;UBERON:0001041,2.55e-07,80;UBERON:0007811,8.59e-07,36
|phase1_expression=1.92178616525753,5.58360652222978,2.72999543633722,9.67885476181856,10.5188103288733,6.71517087647559,4.90586545250604,32.7973241541604,5.06839399746,4.21316147379588,5.82141091966717,5.10541817570153,22.0848941611255,33.307173321638,7.99463428357591,6.47920855647443,9.09430441566591,11.8298312009339,9.46089591879598,11.8829102503448,4.16712121740242,10.8227136808965,6.52999472847338,4.63978026100879,4.35877634027623,4.01962374880514,3.4460959692726,4.30942465371778,4.94060890586572,2.77233142735924,3.99114919179548,8.89042942843484,11.6862309641068,0,4.62162591602039,3.65716219788683,3.87921776898501,2.51118978442145,3.1253413780952,1.0470474879476,3.52938892818609,2.04913645487534,1.94204141212461,2.01434908760924,2.93993100536592,3.85448179539531,4.69434806608824,3.70642765846759,1.75748946187577,2.72201858703997,2.37976916763116,2.87505128729943,13.4226084846189,31.1905721064878,18.4851589528355,3.08711323243136,2.29226751951005,5.15672092277442,4.04632921719196,2.64495489636016,3.80298842103708,5.42151251310611,5.33576877666684,1.3498495759221,1.97773272513395,2.8419204597844,2.39680088414724,6.14749288514487,4.35496371695606,4.18518408828241,3.78584930432488,5.42736870367227,4.41737081903227,2.44981598429908,4.02550978276593,1.83843757322004,3.30347642998166,4.34136949489638,2.91852413186863,3.69281605644543,2.56165402086747,2.6045668527838,5.02529398202486,5.06486349028512,4.88954392885792,2.65165726926301,2.84743361598206,3.54158947068071,3.48340489332647,1.43585964202892,4.92769630792852,1.72084775396277,3.39985666853875,8.09554787456726,7.79731700937203,8.06448396775204,3.08977724289854,4.09032774187339,2.07828803682295,4.24007489412408,2.11265129665021,8.98285341900225,10.1922095882658,7.11066703153331,4.11332977921307,5.57391704045217,5.05524445014783,2.96878087269556,12.1700805314171,3.71105347662062,5.89850111004862,2.13125834818499,3.68984795609694,3.3158980921577,3.76283862834255,3.26733137457156,5.93267922562497,2.31358971071859,3.5384422077995,8.25010934731787,6.40440403535141,10.6672555689749,3.72783522436244,7.61230072230023,7.33063473847093,5.10914110417183,3.11519323715393,1.19980546198682,1.52484272487678,9.43681028250383,4.57500602818627,4.90051973240171,5.73620256634512,7.16003280524926,4.77912502486988,7.62533936418461,3.1570202793598,4.72746488318353,3.53811861807145,6.52369753248069,3.77349284591841,2.5289231487682,2.88099407688559,4.06903008156431,6.5995404176788,4.09963904911519,7.02762934197966,6.46758426847539,6.25147179505242,5.8622884852024,7.03804496655795,5.47989331068937,4.72680323683516,8.00979983000983,6.99659263787008,5.57295947091781,1.40442637462647,2.57347907114715,3.12579849335152,3.72826390563903,3.28336483973535,2.88099298337624,4.49814997611899,4.9191057936851,3.08534225774756,1.62773761325285,2.68273401399619,3.03589890154641,3.29119699826961,2.95501435342371,4.13450928683864,2.92399974850665,2.63460138349261,4.2946054003319,5.25724871410318,4.6307075570678,6.27795687669216,4.7601101999438,2.77274725695804,3.0190767341857,4.51036114627327,4.63872106633688,3.33567065767305,3.42406127002606,4.2707615539006,3.78807595865225,3.01602250560323,3.58121649674071,3.11942539390592,2.69645822596266,4.10662294761919,4.97853183135918,5.50036912763937,3.65595240351132,5.63538678365402,5.29493452397817,1.93952487167626,3.64706263429657,3.54124607895841,1.91893192373483,2.35498091762062,3.57851775373222,8.30067355844017,7.34118465150814,5.50365186316968,5.39669069723649,4.86864291332407,5.06472035480075,5.0925170356284,4.89083433666378,4.05338066937588,4.11842119782122,4.31304619582064,4.83783231969054,4.36852742360385,4.54641980304801,4.84373016509163,4.3419916922703,6.46636165583116,5.68474235311454,4.88894929326078,4.07388205860452,4.22442446919304,6.19773152534718,5.71304738126433,6.43941037930736,3.15270288212382,3.32197034473162,6.05928120898451,5.73521601505083,4.66249451037918,3.90552458170081,1.50791283939272,0.54390568381871,5.90117127622843,9.3818493743609,7.22477654945064,9.84578167374507,2.95082901678016,4.29200576247434,3.15508219416257,2.34263246577983,2.36965737506079,5.01834475700359,4.23317480756549,4.24614796183249,4.04810701674894,2.33804686329049,1.97643888973262,8.03303291054518,4.82596289708113,2.84904965867608,4.23506094319298,3.62934270539578,9.2921596837974,2.6705869977048,3.62788268357701,3.77210159511796,5.61073596473468,6.7635732547664,2.06742634534577,3.63533729477506,6.06045543254026,6.0046984007805,5.27093042874994,5.15677716240934,7.14923172082955,2.16073312837572,3.36332577835162,4.07240366560025,3.54680467284547,2.31879462882692,2.13913726782757,2.74018454203139,10.0908834467395,17.1583977399694,9.70324951441832,7.25499512942512,4.52100394748536,6.51379589224083,4.53614907211919,8.042904087508,6.12109756922687,8.71498919449395,7.51831875510552,3.09580301944834,4.07427960213366,3.76736914009382,7.51818252465638,6.40578884978263,5.26933132980952,5.03825228365169,6.90999869022119,2.86401185404534,4.58687190692646,4.67634774391752,3.67218158794124,3.97267762427491,2.83871332870031,5.39457385539283,5.62043498932284,5.23511883968059,3.88844919875379,4.34937519160848,0.56369293868419,3.73791365109947,2.97825282822776,4.86127970860119,4.39143399824286,3.71703476079712,4.10750335260139,6.11960608766566,5.45268591013696,2.89900944991207,4.60848010012585,12.0084225838708,6.08175645870493,7.80603274452687,7.9251702016455,10.5625750443814,7.9472541912506,10.4570041082373,13.8828155544103,11.4092088441407,10.21171209177,10.5867494393683,8.67375138583797,11.0643617886379,12.5058285334279,6.80191150845634,8.87943813496259,9.15081337416652,9.40153851638839,5.60249822693352,8.82107634620555,7.50921659495787,7.07415650960917,11.034586288778,5.64751842617067,4.14292712856459,4.01026859407578,6.8741272937475,8.22099023724771,2.2661816921691,6.07520250208625,4.95353323546643,4.07828168085784,2.5888015587591,2.49089634202024,4.38927360741134,3.58540572083682,7.05009479498053,3.14419743941973,2.5738091183002,3.33370091702423,4.32673620201678,4.81378814387723,6.31743029409494,5.32306529769503,3.9611531691076,4.58843386602424,4.41773551593598,5.57124048869449,4.28664322154766,4.05595140806994,4.43691207066522,4.94503080963968,3.53277408322554,4.11443102862498,4.96932257246145,5.00715998889374,3.92435324907287,3.48204707536723,4.3153450024755,4.57319932181931,5.78753365163254,4.48153575691344,3.92799590160417,5.33857581558784,4.72821515402705,5.32000356120596,4.49316839439301,4.82266527452853,4.49659040288303,5.6143586026898,7.73535794573874,7.07766828654721,6.83833399270498,5.56482805489012
|short_description=p3@Arhgef1
}}

Revision as of 19:41, 4 August 2015

Short description:p3@Arhgef1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Arhgef1_5end
Coexpression cluster:MCL_coexpression_mm9:33
Association with transcript: 0bp_to_ENSMUST00000117419_5end
EntrezGene:16801
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Arhgef1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.92
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I39.68
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.72
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E932.80
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.82
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F15.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E422.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E833.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.48
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A59.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.83
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A49.46
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A611.88
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H210.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I96.53
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.36
GP2+ M cell, pool1.CNhs13228.11845-124H94.02
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I24.31
Ileum epithelium, pool1.CNhs13199.10252-104B94.94
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.51
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.94
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.94
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.85
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.38
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.42
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I931.19
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A118.49
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C34.05
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D15.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.42
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.34
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.54
Mouse Schwann, donor1.CNhs12507.11728-123D93.48
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H18.98
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.97
accessory axillary lymph node, adult.CNhs10475.1063-29H912.17
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C55.90
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C13.76
adrenal gland, neonate N25.CNhs11223.1377-27I33.27
amnion, adult pregnant day17.5.CNhs10488.583-22A85.93
aorta, adult.CNhs10498.46-23H12.31
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F58.25
bone (os femoris), neonate N16.CNhs11225.1525-43A66.40
bone (os femoris), neonate N20.CNhs11195.1350-25C310.67
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H75.11
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A49.44
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F14.90
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F27.16
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B27.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.73
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G46.52
eyeball, embryo E12.CNhs11016.345-16C63.77
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D44.07
eyeball, neonate N00.CNhs11207.633-15C66.60
eyeball, neonate N01.CNhs11140.1532-43E74.10
eyeball, neonate N02.CNhs11205.1551-44G87.03
eyeball, neonate N16.CNhs11188.777-19A26.47
forelimb, embryo E11.CNhs10596.335-25E26.25
forelimb, embryo E12.CNhs10600.359-14H25.86
forelimb, embryo E13.CNhs10589.384-1E27.04
forelimb, embryo E14.CNhs10577.413-26A85.48
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B57.00
gonad, embryo E13.CNhs11044.1564-45I65.57
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.13
heart, embryo E11.CNhs10586.331-24E93.73
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I92.88
heart, embryo E14.CNhs10597.403-26D44.50
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C63.09
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G32.68
heart, neonate N00.CNhs11213.639-21E33.04
heart, neonate N03.CNhs11221.1349-25I23.29
heart, neonate N10.CNhs11118.749-24G12.96
heart, neonate N16.CNhs11209.782-15G14.13
heart, neonate N20.CNhs11127.821-26I62.92
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D24.29
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G14.63
intestinal mucosa, adult.CNhs10506.860-29I36.28
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D84.51
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E93.79
intestine, neonate N06.CNhs11102.688-20B83.02
intestine, neonate N07.CNhs11095.720-20F23.58
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E34.11
intestine, neonate N30.CNhs11131.1384-42G14.98
kidney, embryo E14.CNhs10606.411-4I95.50
kidney, embryo E15.CNhs10997.434-16F83.66
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I25.29
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G73.65
kidney, neonate N10.CNhs11206.758-6D53.54
kidney, neonate N20.CNhs11113.832-19I11.92
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B28.30
liver, embryo E12.CNhs10601.355-15F87.34
liver, embryo E13.CNhs10524.378-3H65.50
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D74.87
liver, embryo E16.CNhs10523.462-17F55.06
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A34.55
liver, neonate N25.CNhs11198.1368-26H14.84
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B16.47
lung, embryo E12.CNhs10522.354-16G25.68
lung, embryo E14.CNhs10604.404-26F84.89
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B64.22
lung, embryo E17.CNhs10605.480-44A66.20
lung, embryo E18.CNhs10583.1287-20I65.71
lung, neonate N00.CNhs11224.640-42C66.44
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E66.06
lung, neonate N20.CNhs11109.822-18A45.74
lung, neonate N25.CNhs11119.1359-25C74.66
lung, neonate N30.CNhs11133.1394-42H23.91
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H29.38
medulla oblongata, adult.CNhs10477.17-12C27.22
medulla oblongata, neonate N30.CNhs11200.1396-42A39.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.29
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.37
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.02
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.98
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I74.83
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I44.24
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F42.67
pancreas, embryo E15.CNhs11042.1556-45F23.63
pancreas, embryo E16.CNhs11003.460-26E53.77
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D86.06
pancreas, neonate N16.CNhs11136.787-43B66.00
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C73.36
pituitary gland, embryo E14.CNhs11037.398-44A54.07
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F62.32
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I710.09
placenta, adult pregnant day17.CNhs10464.577-18G317.16
prostate, adult.CNhs10470.859-1F89.70
skin, adult.CNhs10492.30-1C37.25
skin, neonate N00.CNhs11124.650-25G44.52
skin, neonate N03.CNhs11215.662-22H36.51
skin, neonate N06.CNhs11097.693-20I54.54
skin, neonate N10.CNhs11108.762-6C48.04
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C98.71
spleen, adult.CNhs10465.25-2G27.52
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F24.07
spleen, neonate N10.CNhs11116.752-24D13.77
spleen, neonate N20.CNhs11112.824-19H17.52
spleen, neonate N25.CNhs11099.1354-25G36.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C65.27
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.91
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E34.59
stomach, embryo E15.CNhs10603.1252-16G84.68
stomach, embryo E16.CNhs11022.459-17D43.67
stomach, embryo E17.CNhs11006.1035-18D53.97
stomach, embryo E18.CNhs10999.1286-20C62.84
stomach, neonate N03.CNhs11193.1340-24B85.39
stomach, neonate N07.CNhs11210.718-18A95.62
stomach, neonate N25.CNhs11104.1355-25E45.24
stomach, neonate N30.CNhs11134.1386-42I13.89
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F53.74
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I54.39
testis, embryo E18.CNhs11027.503-18G53.72
testis, neonate N00.CNhs11189.1300-22B74.11
testis, neonate N07.CNhs11222.726-26I46.12
testis, neonate N10.CNhs11204.763-44D95.45
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E24.61
thymus, adult.CNhs10471.38-12B512.01
thymus, embryo E14.CNhs11041.402-44I46.08
thymus, embryo E15.CNhs11005.430-45I27.81
thymus, embryo E16.CNhs11002.456-26C57.93
thymus, embryo E17.CNhs10581.478-18C110.56
thymus, embryo E18.CNhs10595.1273-19G47.95
thymus, neonate N02.CNhs11181.1541-43F810.46
thymus, neonate N03.CNhs11137.2104-43C713.88
thymus, neonate N06.CNhs11197.681-26C411.41
thymus, neonate N07.CNhs11211.713-19D310.21
thymus, neonate N10.CNhs11194.748-24E410.59
thymus, neonate N20.CNhs11186.820-7A28.67
thymus, neonate N25.CNhs11125.1362-25G711.06
thymus, neonate N30.CNhs11132.1393-42G212.51
tongue, adult.CNhs10499.32-1B46.80
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.88
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.15
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.40
urinary bladder, adult.CNhs10481.879-12E45.60
uterus, adult pregnant day19.CNhs10497.590-15F58.82
uterus, adult.CNhs10509.92-27E57.51
vagina, adult.CNhs10502.89-27D57.07
vesicular gland, adult.CNhs10491.51-27F811.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.65
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I82.49
whole body, embryo E12.CNhs10587.857-27C94.39
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D27.05
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F22.57
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.33
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.32
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G55.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.73
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.49
whole body, embryo E17.5.CNhs10513.490-9F94.82
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C27.74
whole body, neonate N01.CNhs10576.659-23C67.08
whole body, neonate N06.CNhs10515.692-21D16.84
whole body, neonate N10.CNhs10518.761-6B45.56





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
mixed endoderm/mesoderm-derived structure1.69e-1135
pharynx9.04e-1124
upper respiratory tract9.04e-1124
chordate pharynx9.04e-1124
pharyngeal arch system9.04e-1124
pharyngeal region of foregut9.04e-1124
thymus1.68e-1023
neck1.68e-1023
respiratory system epithelium1.68e-1023
hemolymphoid system gland1.68e-1023
pharyngeal epithelium1.68e-1023
thymic region1.68e-1023
pharyngeal gland1.68e-1023
entire pharyngeal arch endoderm1.68e-1023
thymus primordium1.68e-1023
early pharyngeal endoderm1.68e-1023
segment of respiratory tract2.98e-1027
gland of gut4.21e-1024
hemopoietic organ1.69e-0929
immune organ1.69e-0929
gut epithelium3.58e-0955
endo-epithelium5.25e-0969
respiratory tract6.87e-0941
respiratory system1.07e-0842
anterior region of body3.71e-0843
foregut2.55e-0780
craniocervical region8.59e-0736
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