FFCP PHASE1:Mm9::chr10:80053037..80053074,-: Difference between revisions
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{{FFCP|EntrezGene=216169|HGNC=|MCL_coexpression_id=1535|UniProt=E9QPN9|association_with_transcript=0bp_to_ENSMUST00000095435_5end|description=CAGE_peak_1_at_Fam108a_5end|id=chr10:80053037..80053074,-|ontology_enrichment_celltype=CL:0002371!4.31e-14!118;CL:0000548!1.32e-13!115;CL:0000004!1.32e-13!115;CL:0000255!1.32e-13!115;CL:0002321!1.57e-12!70;CL:0000220!1.57e-12!70;CL:0000144!2.45e-12!121;CL:0000012!2.45e-12!121;CL:0000063!3.44e-09!66;CL:0000066!3.61e-09!25;CL:0000723!1.03e-07!91;CL:0000048!1.03e-07!91;CL:0002076!2.52e-07!15;CL:0000223!3.62e-07!20;CL:0000055!7.18e-07!50|ontology_enrichment_celltype_v019_2=CL:0002321,1.57e-12,70;CL:0000066,3.61e-09,25;CL:0000723,1.03e-07,91;CL:0000048,1.03e-07,91;CL:0002076,2.52e-07,15;CL:0000223,3.62e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.68e-11!52;UBERON:0005068!1.68e-11!52;UBERON:0006241!1.68e-11!52;UBERON:0007135!1.68e-11!52;UBERON:0000073!4.02e-11!75;UBERON:0001016!4.02e-11!75;UBERON:0001017!4.81e-11!73;UBERON:0005743!4.81e-11!73;UBERON:0002616!1.91e-10!49;UBERON:0002020!2.49e-10!34;UBERON:0000955!3.38e-10!50;UBERON:0006238!3.38e-10!50;UBERON:0000344!5.32e-09!15;UBERON:0002791!3.36e-08!29;UBERON:0003528!3.36e-08!29;UBERON:0001893!3.36e-08!29;UBERON:0001242!5.86e-08!13;UBERON:0000060!5.86e-08!13;UBERON:0001262!5.86e-08!13;UBERON:0004786!5.86e-08!13;UBERON:0002346!8.14e-08!71;UBERON:0003075!8.14e-08!71;UBERON:0007284!8.14e-08!71;UBERON:0000033!9.70e-08!63;UBERON:0002780!1.11e-07!39;UBERON:0001890!1.11e-07!39;UBERON:0006240!1.11e-07!39;UBERON:0003080!1.21e-07!40;UBERON:0002021!3.34e-07!10;UBERON:0000411!3.34e-07!10;UBERON:0001950!3.34e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.39e-12,54;UBERON:0001049,1.68e-11,52;UBERON:0005068,1.68e-11,52;UBERON:0006241,1.68e-11,52;UBERON:0007135,1.68e-11,52;UBERON:0001016,4.02e-11,75;UBERON:0001017,4.81e-11,73;UBERON:0002020,2.49e-10,34;UBERON:0002616,2.80e-09,46;UBERON:0000955,4.82e-09,47;UBERON:0006238,4.82e-09,47;UBERON:0000344,5.32e-09,15;UBERON:0002346,1.80e-08,64;UBERON:0003075,1.80e-08,64;UBERON:0007284,1.80e-08,64;UBERON:0003528,3.36e-08,29;UBERON:0002791,3.36e-08,29;UBERON:0001893,3.36e-08,29;UBERON:0001242,5.86e-08,13;UBERON:0001262,5.86e-08,13;UBERON:0004786,5.86e-08,13;UBERON:0002780,1.11e-07,39;UBERON:0001890,1.11e-07,39;UBERON:0006240,1.11e-07,39;UBERON:0003080,1.21e-07,40;UBERON:0002021,3.34e-07,10;UBERON:0000411,3.34e-07,10;UBERON:0001950,3.34e-07,10;UBERON:0004121,5.47e-07,95;UBERON:0000924,5.47e-07,95;UBERON:0006601,5.47e-07,95|phase1_expression=66.9422180898039,255.449998392012,277.094536788227,344.506736678479,421.253308884878,92.1657202796275,89.4736413480863,52.1658226703968,20.4143647119917,19.4273556847255,27.3948749160808,43.3162823344677,53.0722262786738,59.7081348521752,67.9543914103952,62.767332890846,65.7588165440458,75.2377264379397,63.8953260602743,67.4779546358868,69.3102814731219,49.8440575028444,49.1055603581199,125.114074624444,135.810294391765,235.435105287158,214.950236083378,170.86868751991,193.063794167676,145.67341500124,121.730050349762,71.1234354274787,65.811932271549,79.2408405077194,82.033860009362,79.6263951267178,81.4635731486853,71.9874404867481,71.1015163516658,50.2582794214846,62.9407692193185,78.5502307702212,81.0802289562026,100.087970290584,101.174177357076,85.3492397551819,190.121096676574,86.7740122394177,67.6633442822173,66.8838852815535,63.2738625746639,79.0639104007344,64.4285207261708,48.5992635147601,41.6756310936655,65.0866373170946,47.8510844697724,73.2254371033968,73.8455082137532,75.1167190566287,81.1304196487909,110.463317454537,91.5973639994474,149.383353068712,170.08501436152,170.515227587064,131.824048628098,166.366526204233,51.4300477050049,64.1278207075531,53.2122152218996,163.963665047783,158.141875321355,54.5084056506545,52.1399362339206,68.0221902091416,111.217039809383,86.5720152217573,89.5526088883899,64.624280987795,65.3221775321205,60.9468643551409,134.007839520663,91.7303054351638,80.2190800828253,110.485719552625,90.8331323498277,69.3405938470118,52.4782519798965,61.2129636864963,49.5668275679869,86.90281157512,70.0370473718983,84.1936978954995,61.0789832400809,50.1790113549016,65.3066553612646,73.625899353721,112.227553988439,118.368757460964,65.0696599368264,85.9787398675929,53.5091003383956,113.770672504533,86.1634343224632,84.3688352032078,80.8839112023653,70.1089021475028,35.7334279433097,34.4385762630393,55.6887898919296,51.4546658347519,53.5027953634056,63.3035090321015,43.3902329330751,53.4083013151121,55.8660627079685,24.581890676385,47.7689698052932,38.0152097376412,38.2055826936481,50.4270263260631,37.2783522436244,51.2366394770208,84.8259162594493,102.693736193854,47.0873439308267,55.1910512513935,37.7398574407002,53.0258863493072,76.8601012735293,57.9266563240305,80.6544845692163,106.377630249418,68.7778427492144,81.1206315338788,44.9111594579895,46.9014279200051,52.819056512638,37.8795340595653,42.2891439628787,59.774547152703,42.8547868936731,40.5395959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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:216169 | |||
|HGNC= | |||
|MCL_coexpression_id=1535 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9QPN9 | |||
|association_with_transcript=0bp_to_ENSMUST00000095435_5end | |||
|cluster_id=chr10:80053037..80053074,- | |||
|description=CAGE_peak_1_at_Fam108a_5end | |||
|id=chr10:80053037..80053074,- | |||
|ontology_enrichment_celltype=CL:0002371!4.31e-14!118;CL:0000548!1.32e-13!115;CL:0000004!1.32e-13!115;CL:0000255!1.32e-13!115;CL:0002321!1.57e-12!70;CL:0000220!1.57e-12!70;CL:0000144!2.45e-12!121;CL:0000012!2.45e-12!121;CL:0000063!3.44e-09!66;CL:0000066!3.61e-09!25;CL:0000723!1.03e-07!91;CL:0000048!1.03e-07!91;CL:0002076!2.52e-07!15;CL:0000223!3.62e-07!20;CL:0000055!7.18e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.57e-12,70;CL:0000066,3.61e-09,25;CL:0000723,1.03e-07,91;CL:0000048,1.03e-07,91;CL:0002076,2.52e-07,15;CL:0000223,3.62e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.68e-11!52;UBERON:0005068!1.68e-11!52;UBERON:0006241!1.68e-11!52;UBERON:0007135!1.68e-11!52;UBERON:0000073!4.02e-11!75;UBERON:0001016!4.02e-11!75;UBERON:0001017!4.81e-11!73;UBERON:0005743!4.81e-11!73;UBERON:0002616!1.91e-10!49;UBERON:0002020!2.49e-10!34;UBERON:0000955!3.38e-10!50;UBERON:0006238!3.38e-10!50;UBERON:0000344!5.32e-09!15;UBERON:0002791!3.36e-08!29;UBERON:0003528!3.36e-08!29;UBERON:0001893!3.36e-08!29;UBERON:0001242!5.86e-08!13;UBERON:0000060!5.86e-08!13;UBERON:0001262!5.86e-08!13;UBERON:0004786!5.86e-08!13;UBERON:0002346!8.14e-08!71;UBERON:0003075!8.14e-08!71;UBERON:0007284!8.14e-08!71;UBERON:0000033!9.70e-08!63;UBERON:0002780!1.11e-07!39;UBERON:0001890!1.11e-07!39;UBERON:0006240!1.11e-07!39;UBERON:0003080!1.21e-07!40;UBERON:0002021!3.34e-07!10;UBERON:0000411!3.34e-07!10;UBERON:0001950!3.34e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.39e-12,54;UBERON:0001049,1.68e-11,52;UBERON:0005068,1.68e-11,52;UBERON:0006241,1.68e-11,52;UBERON:0007135,1.68e-11,52;UBERON:0001016,4.02e-11,75;UBERON:0001017,4.81e-11,73;UBERON:0002020,2.49e-10,34;UBERON:0002616,2.80e-09,46;UBERON:0000955,4.82e-09,47;UBERON:0006238,4.82e-09,47;UBERON:0000344,5.32e-09,15;UBERON:0002346,1.80e-08,64;UBERON:0003075,1.80e-08,64;UBERON:0007284,1.80e-08,64;UBERON:0003528,3.36e-08,29;UBERON:0002791,3.36e-08,29;UBERON:0001893,3.36e-08,29;UBERON:0001242,5.86e-08,13;UBERON:0001262,5.86e-08,13;UBERON:0004786,5.86e-08,13;UBERON:0002780,1.11e-07,39;UBERON:0001890,1.11e-07,39;UBERON:0006240,1.11e-07,39;UBERON:0003080,1.21e-07,40;UBERON:0002021,3.34e-07,10;UBERON:0000411,3.34e-07,10;UBERON:0001950,3.34e-07,10;UBERON:0004121,5.47e-07,95;UBERON:0000924,5.47e-07,95;UBERON:0006601,5.47e-07,95 | |||
|phase1_expression=66.9422180898039,255.449998392012,277.094536788227,344.506736678479,421.253308884878,92.1657202796275,89.4736413480863,52.1658226703968,20.4143647119917,19.4273556847255,27.3948749160808,43.3162823344677,53.0722262786738,59.7081348521752,67.9543914103952,62.767332890846,65.7588165440458,75.2377264379397,63.8953260602743,67.4779546358868,69.3102814731219,49.8440575028444,49.1055603581199,125.114074624444,135.810294391765,235.435105287158,214.950236083378,170.86868751991,193.063794167676,145.67341500124,121.730050349762,71.1234354274787,65.811932271549,79.2408405077194,82.033860009362,79.6263951267178,81.4635731486853,71.9874404867481,71.1015163516658,50.2582794214846,62.9407692193185,78.5502307702212,81.0802289562026,100.087970290584,101.174177357076,85.3492397551819,190.121096676574,86.7740122394177,67.6633442822173,66.8838852815535,63.2738625746639,79.0639104007344,64.4285207261708,48.5992635147601,41.6756310936655,65.0866373170946,47.8510844697724,73.2254371033968,73.8455082137532,75.1167190566287,81.1304196487909,110.463317454537,91.5973639994474,149.383353068712,170.08501436152,170.515227587064,131.824048628098,166.366526204233,51.4300477050049,64.1278207075531,53.2122152218996,163.963665047783,158.141875321355,54.5084056506545,52.1399362339206,68.0221902091416,111.217039809383,86.5720152217573,89.5526088883899,64.624280987795,65.3221775321205,60.9468643551409,134.007839520663,91.7303054351638,80.2190800828253,110.485719552625,90.8331323498277,69.3405938470118,52.4782519798965,61.2129636864963,49.5668275679869,86.90281157512,70.0370473718983,84.1936978954995,61.0789832400809,50.1790113549016,65.3066553612646,73.625899353721,112.227553988439,118.368757460964,65.0696599368264,85.9787398675929,53.5091003383956,113.770672504533,86.1634343224632,84.3688352032078,80.8839112023653,70.1089021475028,35.7334279433097,34.4385762630393,55.6887898919296,51.4546658347519,53.5027953634056,63.3035090321015,43.3902329330751,53.4083013151121,55.8660627079685,24.581890676385,47.7689698052932,38.0152097376412,38.2055826936481,50.4270263260631,37.2783522436244,51.2366394770208,84.8259162594493,102.693736193854,47.0873439308267,55.1910512513935,37.7398574407002,53.0258863493072,76.8601012735293,57.9266563240305,80.6544845692163,106.377630249418,68.7778427492144,81.1206315338788,44.9111594579895,46.9014279200051,52.819056512638,37.8795340595653,42.2891439628787,59.774547152703,42.8547868936731,40.5395959978074,50.3470093719826,44.4554609388429,70.3699951443564,40.3577258352864,32.766334925792,29.6896545863476,30.2635933561992,46.6886910070734,34.7559061531997,33.7804601526502,36.217656007798,47.5691897696199,51.2615626738661,56.1018437510079,42.3403614099433,39.7681483268164,48.3123683561058,51.4977495778503,38.1159024292188,50.174879095588,46.7429352048756,45.1115852815791,44.5333846323368,48.4576170823753,38.8361245795814,55.4886028587342,48.1548728702383,46.637795988681,49.8378761710685,49.6563749413376,61.4046649807252,49.2913093296772,114.655317695378,84.8886318989977,38.6051733468773,37.622340841391,30.7993232559803,38.7232367276818,38.4714015851626,44.1323452581137,74.9755917240328,68.5147651651885,60.3204501120647,89.729368890559,53.8100880448772,79.0961079615715,67.4350715609046,68.305456726248,44.5719567239742,40.3297249512343,42.8289395557706,39.9156602576816,41.5058322538719,38.2240218402236,35.2859877153356,50.3350604610443,35.3247137643093,56.1457095844192,67.5911989758699,37.5401487861212,40.0980350030934,41.8243529035828,43.2092058557511,44.3765973944447,40.4855104332458,40.8528515180151,44.9114578166848,46.1263174155977,40.2550978276593,75.1724714290377,46.8056509671841,41.6755148612734,51.4870576807888,56.9283355208773,31.777548708656,55.3314922369815,35.6893298408037,49.7353101321301,47.4074301542774,41.3740455881285,44.7522044865706,41.9537342894267,34.679731703362,42.5212204125648,34.7611395673322,47.6842245822798,40.5809707384855,48.0234874490618,48.2532108605671,50.0393229113213,54.585834305113,41.6664486920146,73.3716196244209,80.6416403754358,44.9181750332091,67.662208490772,47.0107246930222,51.5379142471563,42.2229859556286,36.801194884693,34.9793918309359,33.9691836946599,44.5291771842384,52.3137985661248,35.5759000151871,47.2342335140056,31.3687588310274,53.9538779111783,46.4227834157692,25.7353391837155,119.470624505967,50.0128110479262,63.7902705195625,48.6601105770217,77.0737940418817,57.7978078134584,54.5283698584947,42.8969800783456,48.1271460819374,76.1648586625317,108.581166832249,116.543163870451,42.8953903249773,47.3560677302346,59.7637119076326,57.0136513184036,42.3843158405034,51.0134818341922,49.8583532424427,95.6019940219842,35.4354279176203,52.7461856450912,38.3719412615634,39.7375869588967,31.0011699256139,32.8705440858449,43.5709055611448,41.5276476355005,72.5787283208328,65.8259822137309,38.9585608219104,55.5180674821069,40.3724069665971,42.5712712830602,57.1381871873885,52.8477580107067,33.1457938488018,34.9878630809145,33.4443936606706,79.2376612952544,36.22047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| |||
|short_description=p1@Fam108a | |||
}} |
Revision as of 20:05, 4 August 2015
Short description: | p1@Fam108a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Fam108a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1535 |
Association with transcript: | 0bp_to_ENSMUST00000095435_5end |
EntrezGene: | 216169 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.57e-12 | 70 |
epithelial cell | 3.61e-09 | 25 |
somatic stem cell | 1.03e-07 | 91 |
multi fate stem cell | 1.03e-07 | 91 |
endo-epithelial cell | 2.52e-07 | 15 |
endodermal cell | 3.62e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.39e-12 | 54 |
neural tube | 1.68e-11 | 52 |
neural rod | 1.68e-11 | 52 |
future spinal cord | 1.68e-11 | 52 |
neural keel | 1.68e-11 | 52 |
nervous system | 4.02e-11 | 75 |
central nervous system | 4.81e-11 | 73 |
gray matter | 2.49e-10 | 34 |
regional part of brain | 2.80e-09 | 46 |
brain | 4.82e-09 | 47 |
future brain | 4.82e-09 | 47 |
mucosa | 5.32e-09 | 15 |
neurectoderm | 1.80e-08 | 64 |
neural plate | 1.80e-08 | 64 |
presumptive neural plate | 1.80e-08 | 64 |
brain grey matter | 3.36e-08 | 29 |
regional part of telencephalon | 3.36e-08 | 29 |
telencephalon | 3.36e-08 | 29 |
intestinal mucosa | 5.86e-08 | 13 |
wall of intestine | 5.86e-08 | 13 |
gastrointestinal system mucosa | 5.86e-08 | 13 |
regional part of forebrain | 1.11e-07 | 39 |
forebrain | 1.11e-07 | 39 |
future forebrain | 1.11e-07 | 39 |
anterior neural tube | 1.21e-07 | 40 |
occipital lobe | 3.34e-07 | 10 |
visual cortex | 3.34e-07 | 10 |
neocortex | 3.34e-07 | 10 |
ectoderm-derived structure | 5.47e-07 | 95 |
ectoderm | 5.47e-07 | 95 |
presumptive ectoderm | 5.47e-07 | 95 |