FFCP PHASE1:Mm9::chr12:115850904..115850940,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=63|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:115850904..115850940,-|id=chr12:115850904..115850940,-|ontology_enrichment_celltype=CL:0000553!4.29e-10!6;CL:0000556!4.29e-10!6|ontology_enrichment_celltype_v019_2=CL:0000553,5.77e-17,6;CL:0000556,5.77e-17,6;CL:0000050,4.55e-11,9;CL:0002027,4.17e-09,3;CL:0002006,4.17e-09,3;CL:0002024,4.17e-09,3;CL:0000839,1.96e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.13e-11!51;UBERON:0002193!1.45e-07!48;UBERON:0007823!5.53e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.17e-12,51;UBERON:0002465,2.09e-09,3;UBERON:0002193,1.17e-08,48;UBERON:0002405,1.17e-08,48;UBERON:0002106,1.41e-07,6;UBERON:0004457,1.41e-07,6;UBERON:0000042,1.41e-07,6;UBERON:0004854,1.41e-07,6;UBERON:0009034,1.41e-07,6;UBERON:0002095,1.41e-07,6;UBERON:0004782,1.41e-07,6;UBERON:0003281,1.41e-07,6;UBERON:0009664,1.41e-07,6;UBERON:0002296,1.41e-07,6;UBERON:0005602,1.41e-07,6;UBERON:0001179,1.41e-07,6;UBERON:0006293,1.41e-07,6;UBERON:0001474,7.04e-07,22;UBERON:0004765,7.04e-07,22;UBERON:0001434,7.04e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99463428357591,23.0821804824402,3.49780939064073,14.1957974411207,20.7042794744666,11.4585205985468,0.680346321208558,0,0,4.7997726838022,12.15869189656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55021727259814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04460721999597,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.25602267690966,71.9847316539137,0,0,0,0,0,0,0.125666591329675,0,0.722996784599558,2.65383165584962,0.161766849947409,1.32504911076236,0.484875253135222,0,0,0,35.2530736187856,0,0,0,0,0,0,0,0,0,0,0,1.61729061793121,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,6.08236303326152,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.648414149624083,0.597423819763102,0,0,0,0,0,0,0,0,0,0,2.07516838961004,0,0,0,0,0,0,0.863088412352432,0.810676133875177,0,0,0.744281895337007,0.312037673114561,0,0,0,2.03228509183265,0,0,0,0,0,0,0,0,0,0.318909537314974,1.3109065177259,0.690739927463582,1.15719246865209,0,0,0.491764273019036,3.31124095565679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.8659057328971,0,0,2.96946221350564,0,0,0,0,0,0,0,0,0,0.948110273807448,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,1.98475558249466,1.15420377059036,0,0,0,0,0,0,24.7762777156886,0,0.740778109478847,1.50694765603753,13.1226458612184,3.66045077130436,0,0.139951452323658,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.777689839750757,3.72803587852155,0,0,0,0,0,0,0,0,0,0,0,8.21628913633263,0,0,0,0,0,0,0,0,0.0762068066549998,0.504130925684203,0.974578807397524,0.192423683280659,0.467507608726276,0,0,0,0,10.0458588896739,0.750729901804728,0.183151624267265,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882365676478062,0|short_description=p@chr12:115850904..115850940,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:115850904..115850940,- | |||
|description=CAGE_peak_at_chr12:115850904..115850940,- | |||
|id=chr12:115850904..115850940,- | |||
|ontology_enrichment_celltype=CL:0000553!4.29e-10!6;CL:0000556!4.29e-10!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,5.77e-17,6;CL:0000556,5.77e-17,6;CL:0000050,4.55e-11,9;CL:0002027,4.17e-09,3;CL:0002006,4.17e-09,3;CL:0002024,4.17e-09,3;CL:0000839,1.96e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-11!51;UBERON:0002193!1.45e-07!48;UBERON:0007823!5.53e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.17e-12,51;UBERON:0002465,2.09e-09,3;UBERON:0002193,1.17e-08,48;UBERON:0002405,1.17e-08,48;UBERON:0002106,1.41e-07,6;UBERON:0004457,1.41e-07,6;UBERON:0000042,1.41e-07,6;UBERON:0004854,1.41e-07,6;UBERON:0009034,1.41e-07,6;UBERON:0002095,1.41e-07,6;UBERON:0004782,1.41e-07,6;UBERON:0003281,1.41e-07,6;UBERON:0009664,1.41e-07,6;UBERON:0002296,1.41e-07,6;UBERON:0005602,1.41e-07,6;UBERON:0001179,1.41e-07,6;UBERON:0006293,1.41e-07,6;UBERON:0001474,7.04e-07,22;UBERON:0004765,7.04e-07,22;UBERON:0001434,7.04e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99463428357591,23.0821804824402,3.49780939064073,14.1957974411207,20.7042794744666,11.4585205985468,0.680346321208558,0,0,4.7997726838022,12.15869189656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55021727259814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04460721999597,0,0,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,1.25602267690966,71.9847316539137,0,0,0,0,0,0,0.125666591329675,0,0.722996784599558,2.65383165584962,0.161766849947409,1.32504911076236,0.484875253135222,0,0,0,35.2530736187856,0,0,0,0,0,0,0,0,0,0,0,1.61729061793121,0.252722758433675,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,6.08236303326152,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0.648414149624083,0.597423819763102,0,0,0,0,0,0,0,0,0,0,2.07516838961004,0,0,0,0,0,0,0.863088412352432,0.810676133875177,0,0,0.744281895337007,0.312037673114561,0,0,0,2.03228509183265,0,0,0,0,0,0,0,0,0,0.318909537314974,1.3109065177259,0.690739927463582,1.15719246865209,0,0,0.491764273019036,3.31124095565679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.8659057328971,0,0,2.96946221350564,0,0,0,0,0,0,0,0,0,0.948110273807448,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,1.98475558249466,1.15420377059036,0,0,0,0,0,0,24.7762777156886,0,0.740778109478847,1.50694765603753,13.1226458612184,3.66045077130436,0,0.139951452323658,0,0,0,0,0,0,0,0,0.0826534557253359,0,0.777689839750757,3.72803587852155,0,0,0,0,0,0,0,0,0,0,0,8.21628913633263,0,0,0,0,0,0,0,0,0.0762068066549998,0.504130925684203,0.974578807397524,0.192423683280659,0.467507608726276,0,0,0,0,10.0458588896739,0.750729901804728,0.183151624267265,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882365676478062,0 | |||
|short_description=p@chr12:115850904..115850940,- | |||
}} |
Latest revision as of 20:17, 4 August 2015
Short description: | p@chr12:115850904..115850940, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:115850904..115850940, - |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 5.77e-17 | 6 |
megakaryocyte | 5.77e-17 | 6 |
megakaryocyte-erythroid progenitor cell | 4.55e-11 | 9 |
CD9-positive, CD41-positive megakaryocyte cell | 4.17e-09 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 4.17e-09 | 3 |
Kit-positive megakaryocyte progenitor cell | 4.17e-09 | 3 |
myeloid lineage restricted progenitor cell | 1.96e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.17e-12 | 51 |
lymphoid system | 2.09e-09 | 3 |
hemolymphoid system | 1.17e-08 | 48 |
immune system | 1.17e-08 | 48 |
spleen | 1.41e-07 | 6 |
cavity lining | 1.41e-07 | 6 |
serous membrane | 1.41e-07 | 6 |
gastrointestinal system mesentery | 1.41e-07 | 6 |
stomach region | 1.41e-07 | 6 |
mesentery | 1.41e-07 | 6 |
gastrointestinal system serosa | 1.41e-07 | 6 |
mesentery of stomach | 1.41e-07 | 6 |
gut mesentery | 1.41e-07 | 6 |
dorsal mesentery | 1.41e-07 | 6 |
dorsal mesogastrium | 1.41e-07 | 6 |
peritoneal cavity | 1.41e-07 | 6 |
spleen primordium | 1.41e-07 | 6 |
bone element | 7.04e-07 | 22 |
skeletal element | 7.04e-07 | 22 |
skeletal system | 7.04e-07 | 22 |