FFCP PHASE1:Mm9::chr5:98447241..98447259,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:98447241..98447259,-|id=chr5:98447241..98447259,-|ontology_enrichment_celltype=CL:0000838!7.03e-13!12;CL:0000542!1.04e-11!13;CL:0000051!1.04e-11!13;CL:0000084!2.98e-11!11;CL:0000827!2.98e-11!11;CL:0002031!6.06e-11!25;CL:0000988!2.55e-10!32;CL:0002032!2.55e-10!32;CL:0000037!2.55e-10!32;CL:0000566!2.55e-10!32;CL:0000837!2.55e-10!32;CL:0000738!2.00e-08!17;CL:0002087!2.00e-08!17;CL:0000791!2.61e-08!9;CL:0000789!2.61e-08!9;CL:0002420!2.61e-08!9;CL:0002419!2.61e-08!9;CL:0000790!2.61e-08!9;CL:0000624!4.90e-07!8|ontology_enrichment_celltype_v019_2=CL:0000553,2.19e-11,6;CL:0000556,2.19e-11,6;CL:0000945,1.24e-08,1;CL:0000236,1.24e-08,1;CL:0000826,1.24e-08,1;CL:0000815,2.89e-08,1;CL:0000792,2.89e-08,1;CL:0000355,4.34e-08,9;CL:0000050,8.84e-08,9;CL:0002031,3.46e-07,25|ontology_enrichment_disease=DOID:0060100!6.04e-07!3;DOID:4045!6.04e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,4.72e-23,3;DOID:4045,4.72e-23,3;DOID:0050686,7.42e-12,6|ontology_enrichment_uberon=UBERON:0002370!5.09e-19!23;UBERON:0000974!5.09e-19!23;UBERON:0004807!5.09e-19!23;UBERON:0005058!5.09e-19!23;UBERON:0003351!5.09e-19!23;UBERON:0009113!5.09e-19!23;UBERON:0003295!5.09e-19!23;UBERON:0009722!5.09e-19!23;UBERON:0005562!5.09e-19!23;UBERON:0007690!5.09e-19!23;UBERON:0006562!5.00e-18!24;UBERON:0003408!5.00e-18!24;UBERON:0001557!5.00e-18!24;UBERON:0001042!5.00e-18!24;UBERON:0008814!5.00e-18!24;UBERON:0009145!5.00e-18!24;UBERON:0004177!8.93e-18!29;UBERON:0002193!8.96e-16!48;UBERON:0002390!1.39e-15!45;UBERON:0003061!1.39e-15!45;UBERON:0000072!1.70e-15!27;UBERON:0000065!3.03e-12!41;UBERON:0001004!7.94e-12!42;UBERON:0000063!6.71e-11!35;UBERON:0002405!8.58e-09!70;UBERON:0005057!6.25e-08!51;UBERON:0003081!3.40e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.34e-08,9;UBERON:0002036,4.34e-08,9;UBERON:0002385,4.34e-08,9;UBERON:0000486,4.34e-08,9;UBERON:0007503,4.34e-08,9;UBERON:0001015,4.34e-08,9;UBERON:0002329,4.34e-08,9;UBERON:0003082,4.34e-08,9;UBERON:0003059,4.34e-08,9;UBERON:0007282,4.34e-08,9;UBERON:0004290,4.34e-08,9;UBERON:0009618,4.34e-08,9;UBERON:0002204,4.95e-08,32;UBERON:0000383,2.49e-07,10|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.281577444303333,0.936258105287974,0.171217968225505,0,0.171200729931206,0.34968160967599,0.333109761815663,0,0,1.89277299214943,1.37114433605739,2.12194825899015,0,0.595745707205312,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37063261473815,2.3440060335714,3.66466620781659,24.1174910092716,11.6117732442936,6.79714494243615,0,0,0,0,0,0,0,0,0,2.18117387875057,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0.292399974850665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0.228778173206523,1.18984900995699,0.419854356970974,0.690999869022119,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.358053391334963,0.39736270956253,0.120195449519969,0.295379054349154,0.504832249740738,0.228620419965,0.504130925684203,0.487289403698762,0.577271049841977,0.584384510907845,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:98447241..98447259,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr5:98447241..98447259,- | |||
|description=CAGE_peak_at_chr5:98447241..98447259,- | |||
|id=chr5:98447241..98447259,- | |||
|ontology_enrichment_celltype=CL:0000838!7.03e-13!12;CL:0000542!1.04e-11!13;CL:0000051!1.04e-11!13;CL:0000084!2.98e-11!11;CL:0000827!2.98e-11!11;CL:0002031!6.06e-11!25;CL:0000988!2.55e-10!32;CL:0002032!2.55e-10!32;CL:0000037!2.55e-10!32;CL:0000566!2.55e-10!32;CL:0000837!2.55e-10!32;CL:0000738!2.00e-08!17;CL:0002087!2.00e-08!17;CL:0000791!2.61e-08!9;CL:0000789!2.61e-08!9;CL:0002420!2.61e-08!9;CL:0002419!2.61e-08!9;CL:0000790!2.61e-08!9;CL:0000624!4.90e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.19e-11,6;CL:0000556,2.19e-11,6;CL:0000945,1.24e-08,1;CL:0000236,1.24e-08,1;CL:0000826,1.24e-08,1;CL:0000815,2.89e-08,1;CL:0000792,2.89e-08,1;CL:0000355,4.34e-08,9;CL:0000050,8.84e-08,9;CL:0002031,3.46e-07,25 | |||
|ontology_enrichment_disease=DOID:0060100!6.04e-07!3;DOID:4045!6.04e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.72e-23,3;DOID:4045,4.72e-23,3;DOID:0050686,7.42e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0002370!5.09e-19!23;UBERON:0000974!5.09e-19!23;UBERON:0004807!5.09e-19!23;UBERON:0005058!5.09e-19!23;UBERON:0003351!5.09e-19!23;UBERON:0009113!5.09e-19!23;UBERON:0003295!5.09e-19!23;UBERON:0009722!5.09e-19!23;UBERON:0005562!5.09e-19!23;UBERON:0007690!5.09e-19!23;UBERON:0006562!5.00e-18!24;UBERON:0003408!5.00e-18!24;UBERON:0001557!5.00e-18!24;UBERON:0001042!5.00e-18!24;UBERON:0008814!5.00e-18!24;UBERON:0009145!5.00e-18!24;UBERON:0004177!8.93e-18!29;UBERON:0002193!8.96e-16!48;UBERON:0002390!1.39e-15!45;UBERON:0003061!1.39e-15!45;UBERON:0000072!1.70e-15!27;UBERON:0000065!3.03e-12!41;UBERON:0001004!7.94e-12!42;UBERON:0000063!6.71e-11!35;UBERON:0002405!8.58e-09!70;UBERON:0005057!6.25e-08!51;UBERON:0003081!3.40e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.34e-08,9;UBERON:0002036,4.34e-08,9;UBERON:0002385,4.34e-08,9;UBERON:0000486,4.34e-08,9;UBERON:0007503,4.34e-08,9;UBERON:0001015,4.34e-08,9;UBERON:0002329,4.34e-08,9;UBERON:0003082,4.34e-08,9;UBERON:0003059,4.34e-08,9;UBERON:0007282,4.34e-08,9;UBERON:0004290,4.34e-08,9;UBERON:0009618,4.34e-08,9;UBERON:0002204,4.95e-08,32;UBERON:0000383,2.49e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,1.16210991097419,0.281577444303333,0.936258105287974,0.171217968225505,0,0.171200729931206,0.34968160967599,0.333109761815663,0,0,1.89277299214943,1.37114433605739,2.12194825899015,0,0.595745707205312,0.783599367416806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37063261473815,2.3440060335714,3.66466620781659,24.1174910092716,11.6117732442936,6.79714494243615,0,0,0,0,0,0,0,0,0,2.18117387875057,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0.292399974850665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0.228778173206523,1.18984900995699,0.419854356970974,0.690999869022119,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.129920822977795,0.358053391334963,0.39736270956253,0.120195449519969,0.295379054349154,0.504832249740738,0.228620419965,0.504130925684203,0.487289403698762,0.577271049841977,0.584384510907845,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:98447241..98447259,- | |||
}} |
Latest revision as of 20:21, 4 August 2015
Short description: | p@chr5:98447241..98447259, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:98447241..98447259, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.19e-11 | 6 |
megakaryocyte | 2.19e-11 | 6 |
lymphocyte of B lineage | 1.24e-08 | 1 |
B cell | 1.24e-08 | 1 |
pro-B cell | 1.24e-08 | 1 |
regulatory T cell | 2.89e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.89e-08 | 1 |
multi-potent skeletal muscle stem cell | 4.34e-08 | 9 |
megakaryocyte-erythroid progenitor cell | 8.84e-08 | 9 |
hematopoietic lineage restricted progenitor cell | 3.46e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 4.34e-08 | 9 |
striated muscle tissue | 4.34e-08 | 9 |
muscle tissue | 4.34e-08 | 9 |
multilaminar epithelium | 4.34e-08 | 9 |
epithelial vesicle | 4.34e-08 | 9 |
musculature | 4.34e-08 | 9 |
somite | 4.34e-08 | 9 |
myotome | 4.34e-08 | 9 |
presomitic mesoderm | 4.34e-08 | 9 |
presumptive segmental plate | 4.34e-08 | 9 |
dermomyotome | 4.34e-08 | 9 |
trunk paraxial mesoderm | 4.34e-08 | 9 |
musculoskeletal system | 4.95e-08 | 32 |
musculature of body | 2.49e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.72e-23 | 3 |
muscle cancer | 4.72e-23 | 3 |
organ system cancer | 7.42e-12 | 6 |