FFCP PHASE1:Mm9::chr2:25119790..25119810,+: Difference between revisions
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{{FFCP|EntrezGene=97031|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=29bp_to_ENSMUST00000137361_5end|description=CAGE_peak_3_at_Tprn_5end|id=chr2:25119790..25119810,+|ontology_enrichment_celltype=CL:0002563!1.91e-08!9;CL:0002251!1.91e-08!9|ontology_enrichment_celltype_v019_2=CL:0000239,3.29e-12,6;CL:0000677,3.29e-12,6;CL:0000584,3.29e-12,6;CL:0000075,2.31e-10,7;CL:0002563,6.70e-08,9;CL:0002251,6.70e-08,9;CL:0000682,7.57e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.24e-14!43;UBERON:0000344!2.46e-14!15;UBERON:0005409!8.97e-13!59;UBERON:0001242!1.66e-12!13;UBERON:0000060!1.66e-12!13;UBERON:0001262!1.66e-12!13;UBERON:0004786!1.66e-12!13;UBERON:0003350!1.91e-08!9;UBERON:0004808!1.91e-08!9;UBERON:0001277!1.91e-08!9;UBERON:0004923!6.25e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.96e-34,31;UBERON:0005409,3.08e-24,47;UBERON:0000344,3.48e-19,15;UBERON:0001242,1.62e-15,13;UBERON:0001262,1.62e-15,13;UBERON:0004786,1.62e-15,13;UBERON:0004923,6.11e-11,24;UBERON:0002108,2.24e-10,4;UBERON:0000331,2.52e-08,3;UBERON:0002116,2.52e-08,3;UBERON:0001204,2.52e-08,3;UBERON:0001168,2.52e-08,3;UBERON:0003350,6.70e-08,9;UBERON:0004808,6.70e-08,9;UBERON:0001277,6.70e-08,9;UBERON:0001007,9.01e-08,116;UBERON:0001555,9.01e-08,116;UBERON:0007026,9.01e-08,116;UBERON:0004119,1.56e-07,118;UBERON:0000925,1.56e-07,118;UBERON:0006595,1.56e-07,118|phase1_expression=0,9.42233600626275,6.82498859084304,3.62957053568196,5.00895729946347,1.00727563147134,1.40167584357315,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,7.03966660290989,4.12936705920906,8.6134794617253,9.47676391549965,6.67960821326256,17.4821545899864,9.8291750606373,13.082100128663,0,0,0,0.866554859253824,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,1.74986909166855,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,2.92780797011547,2.30391377494801,13.2837668708468,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0.229902104433473,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,5.94753809370836,4.7601101999438,0,0,0,0.201683524623343,0.667134131534611,4.56541502670142,7.59246498471219,11.6936257854048,8.29406189040889,4.77495532898762,7.01870713628832,7.19055526923377,6.48414149624083,5.37681437786791,0,0,0,0,0.193952487167626,0.631222379012867,1.83385957660346,2.21415221969403,1.8839847340965,1.72756029490521,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0.163934945376675,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.989820737835213,0,0,0,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0,0,7.57850175237612,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0.627264888043406,0.655087691238533,0.134864346384821,0.495920734352016,0,1.8146096260851,0,1.12738587736838,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.453460767230423,0,0.0897138566094757,0,0,0.375364950902364,1.09890974560359,0.214368379079066,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0,0.192075457214608,0.229741875822453,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0.532427418478012,0,0,0.0941093804153306,0.169229215783353,0,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,1.07435527024149,0,0,0|short_description=p3@Tprn}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:97031 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=29bp_to_ENSMUST00000137361_5end | |||
|cluster_id=chr2:25119790..25119810,+ | |||
|description=CAGE_peak_3_at_Tprn_5end | |||
|id=chr2:25119790..25119810,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.91e-08!9;CL:0002251!1.91e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.29e-12,6;CL:0000677,3.29e-12,6;CL:0000584,3.29e-12,6;CL:0000075,2.31e-10,7;CL:0002563,6.70e-08,9;CL:0002251,6.70e-08,9;CL:0000682,7.57e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.24e-14!43;UBERON:0000344!2.46e-14!15;UBERON:0005409!8.97e-13!59;UBERON:0001242!1.66e-12!13;UBERON:0000060!1.66e-12!13;UBERON:0001262!1.66e-12!13;UBERON:0004786!1.66e-12!13;UBERON:0003350!1.91e-08!9;UBERON:0004808!1.91e-08!9;UBERON:0001277!1.91e-08!9;UBERON:0004923!6.25e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.96e-34,31;UBERON:0005409,3.08e-24,47;UBERON:0000344,3.48e-19,15;UBERON:0001242,1.62e-15,13;UBERON:0001262,1.62e-15,13;UBERON:0004786,1.62e-15,13;UBERON:0004923,6.11e-11,24;UBERON:0002108,2.24e-10,4;UBERON:0000331,2.52e-08,3;UBERON:0002116,2.52e-08,3;UBERON:0001204,2.52e-08,3;UBERON:0001168,2.52e-08,3;UBERON:0003350,6.70e-08,9;UBERON:0004808,6.70e-08,9;UBERON:0001277,6.70e-08,9;UBERON:0001007,9.01e-08,116;UBERON:0001555,9.01e-08,116;UBERON:0007026,9.01e-08,116;UBERON:0004119,1.56e-07,118;UBERON:0000925,1.56e-07,118;UBERON:0006595,1.56e-07,118 | |||
|phase1_expression=0,9.42233600626275,6.82498859084304,3.62957053568196,5.00895729946347,1.00727563147134,1.40167584357315,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,7.03966660290989,4.12936705920906,8.6134794617253,9.47676391549965,6.67960821326256,17.4821545899864,9.8291750606373,13.082100128663,0,0,0,0.866554859253824,0.997407872150954,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0,0,0,0,0,1.74986909166855,0,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.255374676170375,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,1.25602267690966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,2.92780797011547,2.30391377494801,13.2837668708468,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0.229902104433473,0,0,0,0.12811372028485,0,0,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,5.94753809370836,4.7601101999438,0,0,0,0.201683524623343,0.667134131534611,4.56541502670142,7.59246498471219,11.6936257854048,8.29406189040889,4.77495532898762,7.01870713628832,7.19055526923377,6.48414149624083,5.37681437786791,0,0,0,0,0.193952487167626,0.631222379012867,1.83385957660346,2.21415221969403,1.8839847340965,1.72756029490521,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0.163934945376675,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0.989820737835213,0,0,0,0,0,0,2.06742634534577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180938774784468,0,0,7.57850175237612,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0.627264888043406,0.655087691238533,0.134864346384821,0.495920734352016,0,1.8146096260851,0,1.12738587736838,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.453460767230423,0,0.0897138566094757,0,0,0.375364950902364,1.09890974560359,0.214368379079066,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0,0.192075457214608,0.229741875822453,0.476293691283074,0,0.192909220463705,0,0.147198920134397,0.342869252385415,0.532427418478012,0,0,0.0941093804153306,0.169229215783353,0,0.526139422875686,0.135804113845862,0.561142271657738,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,1.07435527024149,0,0,0 | |||
|short_description=p3@Tprn | |||
}} |
Revision as of 20:29, 4 August 2015
Short description: | p3@Tprn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tprn_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 29bp_to_ENSMUST00000137361_5end |
EntrezGene: | 97031 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.29e-12 | 6 |
gut absorptive cell | 3.29e-12 | 6 |
enterocyte | 3.29e-12 | 6 |
columnar/cuboidal epithelial cell | 2.31e-10 | 7 |
intestinal epithelial cell | 6.70e-08 | 9 |
epithelial cell of alimentary canal | 6.70e-08 | 9 |
M cell of gut | 7.57e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.96e-34 | 31 |
gastrointestinal system | 3.08e-24 | 47 |
mucosa | 3.48e-19 | 15 |
intestinal mucosa | 1.62e-15 | 13 |
wall of intestine | 1.62e-15 | 13 |
gastrointestinal system mucosa | 1.62e-15 | 13 |
organ component layer | 6.11e-11 | 24 |
small intestine | 2.24e-10 | 4 |
ileal mucosa | 2.52e-08 | 3 |
ileum | 2.52e-08 | 3 |
mucosa of small intestine | 2.52e-08 | 3 |
wall of small intestine | 2.52e-08 | 3 |
epithelium of mucosa | 6.70e-08 | 9 |
gastrointestinal system epithelium | 6.70e-08 | 9 |
intestinal epithelium | 6.70e-08 | 9 |
digestive system | 9.01e-08 | 116 |
digestive tract | 9.01e-08 | 116 |
primitive gut | 9.01e-08 | 116 |
endoderm-derived structure | 1.56e-07 | 118 |
endoderm | 1.56e-07 | 118 |
presumptive endoderm | 1.56e-07 | 118 |