FFCP PHASE1:Mm9::chr7:26261585..26261609,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=125|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:26261585..26261609,-|id=chr7:26261585..26261609,-|ontology_enrichment_celltype=CL:0000066!1.83e-09!25;CL:0000223!4.84e-08!20|ontology_enrichment_celltype_v019_2=CL:0000066,1.54e-09,25;CL:0000223,1.77e-08,20;CL:0002076,1.99e-07,15;CL:0000068,8.94e-07,3;CL:0002202,8.94e-07,3;CL:0000069,8.94e-07,3;CL:0002632,8.94e-07,3;CL:0002368,8.94e-07,3;CL:0000307,8.94e-07,3;CL:0000377,8.94e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!4.19e-13!130;UBERON:0000925!4.19e-13!130;UBERON:0006595!4.19e-13!130;UBERON:0001007!1.77e-12!128;UBERON:0001555!1.77e-12!128;UBERON:0007026!1.77e-12!128;UBERON:0000344!1.54e-11!15;UBERON:0004921!2.44e-11!126;UBERON:0004185!2.44e-11!126;UBERON:0000160!1.89e-10!43;UBERON:0004923!2.99e-10!24;UBERON:0005409!3.44e-10!59;UBERON:0001242!7.10e-10!13;UBERON:0000060!7.10e-10!13;UBERON:0001262!7.10e-10!13;UBERON:0004786!7.10e-10!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.50e-21,31;UBERON:0005409,3.82e-14,47;UBERON:0001007,5.18e-14,116;UBERON:0001555,5.18e-14,116;UBERON:0007026,5.18e-14,116;UBERON:0004119,1.23e-13,118;UBERON:0000925,1.23e-13,118;UBERON:0006595,1.23e-13,118;UBERON:0000344,1.29e-12,15;UBERON:0004921,4.39e-12,114;UBERON:0002108,1.18e-09,4;UBERON:0001242,2.37e-09,13;UBERON:0001262,2.37e-09,13;UBERON:0004786,2.37e-09,13;UBERON:0000331,8.24e-08,3;UBERON:0002116,8.24e-08,3;UBERON:0001204,8.24e-08,3;UBERON:0001168,8.24e-08,3;UBERON:0004923,4.19e-07,24;UBERON:0003126,8.94e-07,3;UBERON:0001005,8.94e-07,3;UBERON:0007196,8.94e-07,3;UBERON:0001558,8.94e-07,3|phase1_expression=0,1.39590163055744,0.909998478779072,1.81478526784098,4.00716583957078,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.274228867211478,0,0.0850432901510698,0.0992909512008853,0,2.55987876469451,3.67054849707472,2.8711598205751,0.86152399231815,2.15471232685889,8.7410772949932,3.2763916868791,4.21287970245079,0,0,0,1.1554064790051,0.332469290716985,0.204169356262369,0.837063261473815,0.7813353445238,0.523523743973798,1.76469446409304,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,4.85732872474035,1.94932925234301,0.896053774194671,0.561777680527007,0,0,0,0.14084341977668,0,0,0,1.5154372870785,1.77351905832569,2.02209778005913,0.91347103775248,0,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0,0,0,5.59175283654366,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0.268412837520744,0.210289948564127,0,0.991256348951394,2.90895623329899,0,0,0,0.201683524623343,0.889512175379481,0.190225626112559,3.32170343081158,2.79988223030818,1.00534083520108,1.59165177632921,0.779856348476481,5.39291645192533,10.59076444386,3.78368419183298,0,0,1.1270773567308,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0.147610147979602,0.31399745568275,0.370191491765402,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0.324270453550071,1.64736847912849,7.18841032636773,0.372140947668503,0.624075346229121,1.26289438973556,1.07638448113147,0,0.739012760666419,0,0,0,0,0,0,0.390267295715598,0,0.664394068946325,0.478364305972461,1.14704320301017,1.20879487306127,0.867894351489069,0,1.63171705145613,0.983528546038072,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0.21183207086382,1.7642271844397,0,0,0,0,0,2.33184669303881,0,0.170870880797853,0,0.555583582109135,0,0.136694227721025,0,0,0,0.138199973804424,0,0,0,0.972048067396211,0.627264888043406,0.436725127492355,0,0.330613822901344,0,34.0887379757415,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,1.28206136987086,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0,0,0,0.685738504770831,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0.382576664137687,0,0|short_description=p@chr7:26261585..26261609,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=125 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:26261585..26261609,- | |||
|description=CAGE_peak_at_chr7:26261585..26261609,- | |||
|id=chr7:26261585..26261609,- | |||
|ontology_enrichment_celltype=CL:0000066!1.83e-09!25;CL:0000223!4.84e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.54e-09,25;CL:0000223,1.77e-08,20;CL:0002076,1.99e-07,15;CL:0000068,8.94e-07,3;CL:0002202,8.94e-07,3;CL:0000069,8.94e-07,3;CL:0002632,8.94e-07,3;CL:0002368,8.94e-07,3;CL:0000307,8.94e-07,3;CL:0000377,8.94e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.19e-13!130;UBERON:0000925!4.19e-13!130;UBERON:0006595!4.19e-13!130;UBERON:0001007!1.77e-12!128;UBERON:0001555!1.77e-12!128;UBERON:0007026!1.77e-12!128;UBERON:0000344!1.54e-11!15;UBERON:0004921!2.44e-11!126;UBERON:0004185!2.44e-11!126;UBERON:0000160!1.89e-10!43;UBERON:0004923!2.99e-10!24;UBERON:0005409!3.44e-10!59;UBERON:0001242!7.10e-10!13;UBERON:0000060!7.10e-10!13;UBERON:0001262!7.10e-10!13;UBERON:0004786!7.10e-10!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.50e-21,31;UBERON:0005409,3.82e-14,47;UBERON:0001007,5.18e-14,116;UBERON:0001555,5.18e-14,116;UBERON:0007026,5.18e-14,116;UBERON:0004119,1.23e-13,118;UBERON:0000925,1.23e-13,118;UBERON:0006595,1.23e-13,118;UBERON:0000344,1.29e-12,15;UBERON:0004921,4.39e-12,114;UBERON:0002108,1.18e-09,4;UBERON:0001242,2.37e-09,13;UBERON:0001262,2.37e-09,13;UBERON:0004786,2.37e-09,13;UBERON:0000331,8.24e-08,3;UBERON:0002116,8.24e-08,3;UBERON:0001204,8.24e-08,3;UBERON:0001168,8.24e-08,3;UBERON:0004923,4.19e-07,24;UBERON:0003126,8.94e-07,3;UBERON:0001005,8.94e-07,3;UBERON:0007196,8.94e-07,3;UBERON:0001558,8.94e-07,3 | |||
|phase1_expression=0,1.39590163055744,0.909998478779072,1.81478526784098,4.00716583957078,1.17515490338323,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0.274228867211478,0,0.0850432901510698,0.0992909512008853,0,2.55987876469451,3.67054849707472,2.8711598205751,0.86152399231815,2.15471232685889,8.7410772949932,3.2763916868791,4.21287970245079,0,0,0,1.1554064790051,0.332469290716985,0.204169356262369,0.837063261473815,0.7813353445238,0.523523743973798,1.76469446409304,1.36609096991689,1.45653105909346,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0.679971333707751,4.85732872474035,1.94932925234301,0.896053774194671,0.561777680527007,0,0,0,0.14084341977668,0,0,0,1.5154372870785,1.77351905832569,2.02209778005913,0.91347103775248,0,0,0,0,0.230615497256059,0.150722640552623,0.117588707135705,0,0.247194967734374,0,0,0,0,0,5.59175283654366,0,0,6.38642638021478,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0.0680364991513279,0,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0.268412837520744,0.210289948564127,0,0.991256348951394,2.90895623329899,0,0,0,0.201683524623343,0.889512175379481,0.190225626112559,3.32170343081158,2.79988223030818,1.00534083520108,1.59165177632921,0.779856348476481,5.39291645192533,10.59076444386,3.78368419183298,0,0,1.1270773567308,0,0.387904974335251,0.0701358198903186,0.0632365371242573,0.147610147979602,0.31399745568275,0.370191491765402,0.296452627087149,0,0,0,0,0,0.25462585178142,0,0.324270453550071,1.64736847912849,7.18841032636773,0.372140947668503,0.624075346229121,1.26289438973556,1.07638448113147,0,0.739012760666419,0,0,0,0,0,0,0.390267295715598,0,0.664394068946325,0.478364305972461,1.14704320301017,1.20879487306127,0.867894351489069,0,1.63171705145613,0.983528546038072,0,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0.21183207086382,1.7642271844397,0,0,0,0,0,2.33184669303881,0,0.170870880797853,0,0.555583582109135,0,0.136694227721025,0,0,0,0.138199973804424,0,0,0,0.972048067396211,0.627264888043406,0.436725127492355,0,0.330613822901344,0,34.0887379757415,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.187682475451182,1.28206136987086,0.214368379079066,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0,0,0,0,0.685738504770831,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.135804113845862,0.561142271657738,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0.382576664137687,0,0 | |||
|short_description=p@chr7:26261585..26261609,- | |||
}} |
Latest revision as of 20:32, 4 August 2015
Short description: | p@chr7:26261585..26261609, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:26261585..26261609, - |
Coexpression cluster: | MCL_coexpression_mm9:125 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.54e-09 | 25 |
endodermal cell | 1.77e-08 | 20 |
endo-epithelial cell | 1.99e-07 | 15 |
duct epithelial cell | 8.94e-07 | 3 |
epithelial cell of tracheobronchial tree | 8.94e-07 | 3 |
branched duct epithelial cell | 8.94e-07 | 3 |
epithelial cell of lower respiratory tract | 8.94e-07 | 3 |
respiratory epithelial cell | 8.94e-07 | 3 |
tracheal epithelial cell | 8.94e-07 | 3 |
tracheoblast | 8.94e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.50e-21 | 31 |
gastrointestinal system | 3.82e-14 | 47 |
digestive system | 5.18e-14 | 116 |
digestive tract | 5.18e-14 | 116 |
primitive gut | 5.18e-14 | 116 |
endoderm-derived structure | 1.23e-13 | 118 |
endoderm | 1.23e-13 | 118 |
presumptive endoderm | 1.23e-13 | 118 |
mucosa | 1.29e-12 | 15 |
subdivision of digestive tract | 4.39e-12 | 114 |
small intestine | 1.18e-09 | 4 |
intestinal mucosa | 2.37e-09 | 13 |
wall of intestine | 2.37e-09 | 13 |
gastrointestinal system mucosa | 2.37e-09 | 13 |
ileal mucosa | 8.24e-08 | 3 |
ileum | 8.24e-08 | 3 |
mucosa of small intestine | 8.24e-08 | 3 |
wall of small intestine | 8.24e-08 | 3 |
organ component layer | 4.19e-07 | 24 |
trachea | 8.94e-07 | 3 |
respiratory airway | 8.94e-07 | 3 |
tracheobronchial tree | 8.94e-07 | 3 |
lower respiratory tract | 8.94e-07 | 3 |