FFCP PHASE1:Mm9::chr10:80857552..80857569,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1255|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:80857552..80857569,+|id=chr10:80857552..80857569,+|ontology_enrichment_celltype=CL:0002563!6.40e-13!9;CL:0002251!6.40e-13!9;CL:0000239!7.70e-10!6;CL:0000677!7.70e-10!6;CL:0000212!7.70e-10!6;CL:0000584!7.70e-10!6;CL:0000075!2.94e-08!7;CL:0002076!7.68e-07!15|ontology_enrichment_celltype_v019_2=CL:0000239,3.26e-19,6;CL:0000677,3.26e-19,6;CL:0000584,3.26e-19,6;CL:0002563,1.38e-16,9;CL:0002251,1.38e-16,9;CL:0000075,2.21e-16,7;CL:0000066,5.66e-11,25;CL:0000682,4.11e-10,3;CL:0002076,1.41e-09,15;CL:0000223,5.99e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.93e-21!15;UBERON:0000160!2.10e-20!43;UBERON:0005409!1.02e-19!59;UBERON:0001242!1.95e-18!13;UBERON:0000060!1.95e-18!13;UBERON:0001262!1.95e-18!13;UBERON:0004786!1.95e-18!13;UBERON:0004923!3.36e-13!24;UBERON:0003350!6.40e-13!9;UBERON:0004808!6.40e-13!9;UBERON:0001277!6.40e-13!9;UBERON:0000485!3.83e-10!11;UBERON:0001007!7.94e-07!128;UBERON:0001555!7.94e-07!128;UBERON:0007026!7.94e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.22e-34,15;UBERON:0000160,1.56e-32,31;UBERON:0001242,6.90e-28,13;UBERON:0001262,6.90e-28,13;UBERON:0004786,6.90e-28,13;UBERON:0004923,2.57e-20,24;UBERON:0005409,3.91e-20,47;UBERON:0003350,1.38e-16,9;UBERON:0004808,1.38e-16,9;UBERON:0001277,1.38e-16,9;UBERON:0000485,2.10e-13,11;UBERON:0002108,1.34e-12,4;UBERON:0000331,3.32e-10,3;UBERON:0002116,3.32e-10,3;UBERON:0001204,3.32e-10,3;UBERON:0001168,3.32e-10,3;UBERON:0001962,6.90e-08,2;UBERON:0001961,6.90e-08,2;UBERON:0001744,6.90e-08,2;UBERON:0001007,9.12e-08,116;UBERON:0001555,9.12e-08,116;UBERON:0007026,9.12e-08,116;UBERON:0004119,1.46e-07,118;UBERON:0000925,1.46e-07,118;UBERON:0006595,1.46e-07,118|phase1_expression=0,6.97950815278722,5.45999087267443,11.7961042409664,10.5188103288733,1.84667199103079,3.03696432774183,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,3.74190476664707,0,0,13.5993559374396,7.57050627521661,2.29692785646008,3.4460959692726,8.40337807474967,9.31114755336232,5.29263272495855,1.77384408524244,0,0,0,0.288851619751275,0.664938581433969,1.02084678131185,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10914110417183,0.239630249011841,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26921322564356,1.58670339998127,0,0,0.128867461322093,0.605050573870028,0.444756087689741,1.33157938278791,5.21981967698963,0.988193728344065,0.754005626400808,0.198956472041151,0.779856348476481,2.69645822596266,2.80979464837102,2.78797782556114,0,0.228497025219458,0,0,0,0,0.0632365371242573,0.147610147979602,0.156998727841375,0.370191491765402,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0.228778173206523,0,0,0.138199973804424,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.404593039154462,0,0,0.129614973291793,0,15.7834022831573,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0,0,1.44950472495604,2.59227005632079,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr10:80857552..80857569,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1255 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:80857552..80857569,+ | |||
|description=CAGE_peak_at_chr10:80857552..80857569,+ | |||
|id=chr10:80857552..80857569,+ | |||
|ontology_enrichment_celltype=CL:0002563!6.40e-13!9;CL:0002251!6.40e-13!9;CL:0000239!7.70e-10!6;CL:0000677!7.70e-10!6;CL:0000212!7.70e-10!6;CL:0000584!7.70e-10!6;CL:0000075!2.94e-08!7;CL:0002076!7.68e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.26e-19,6;CL:0000677,3.26e-19,6;CL:0000584,3.26e-19,6;CL:0002563,1.38e-16,9;CL:0002251,1.38e-16,9;CL:0000075,2.21e-16,7;CL:0000066,5.66e-11,25;CL:0000682,4.11e-10,3;CL:0002076,1.41e-09,15;CL:0000223,5.99e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.93e-21!15;UBERON:0000160!2.10e-20!43;UBERON:0005409!1.02e-19!59;UBERON:0001242!1.95e-18!13;UBERON:0000060!1.95e-18!13;UBERON:0001262!1.95e-18!13;UBERON:0004786!1.95e-18!13;UBERON:0004923!3.36e-13!24;UBERON:0003350!6.40e-13!9;UBERON:0004808!6.40e-13!9;UBERON:0001277!6.40e-13!9;UBERON:0000485!3.83e-10!11;UBERON:0001007!7.94e-07!128;UBERON:0001555!7.94e-07!128;UBERON:0007026!7.94e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.22e-34,15;UBERON:0000160,1.56e-32,31;UBERON:0001242,6.90e-28,13;UBERON:0001262,6.90e-28,13;UBERON:0004786,6.90e-28,13;UBERON:0004923,2.57e-20,24;UBERON:0005409,3.91e-20,47;UBERON:0003350,1.38e-16,9;UBERON:0004808,1.38e-16,9;UBERON:0001277,1.38e-16,9;UBERON:0000485,2.10e-13,11;UBERON:0002108,1.34e-12,4;UBERON:0000331,3.32e-10,3;UBERON:0002116,3.32e-10,3;UBERON:0001204,3.32e-10,3;UBERON:0001168,3.32e-10,3;UBERON:0001962,6.90e-08,2;UBERON:0001961,6.90e-08,2;UBERON:0001744,6.90e-08,2;UBERON:0001007,9.12e-08,116;UBERON:0001555,9.12e-08,116;UBERON:0007026,9.12e-08,116;UBERON:0004119,1.46e-07,118;UBERON:0000925,1.46e-07,118;UBERON:0006595,1.46e-07,118 | |||
|phase1_expression=0,6.97950815278722,5.45999087267443,11.7961042409664,10.5188103288733,1.84667199103079,3.03696432774183,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,3.74190476664707,0,0,13.5993559374396,7.57050627521661,2.29692785646008,3.4460959692726,8.40337807474967,9.31114755336232,5.29263272495855,1.77384408524244,0,0,0,0.288851619751275,0.664938581433969,1.02084678131185,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10914110417183,0.239630249011841,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26921322564356,1.58670339998127,0,0,0.128867461322093,0.605050573870028,0.444756087689741,1.33157938278791,5.21981967698963,0.988193728344065,0.754005626400808,0.198956472041151,0.779856348476481,2.69645822596266,2.80979464837102,2.78797782556114,0,0.228497025219458,0,0,0,0,0.0632365371242573,0.147610147979602,0.156998727841375,0.370191491765402,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1659233465194,0,0,0,0,0,0,0.228778173206523,0,0,0.138199973804424,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0.404593039154462,0,0,0.129614973291793,0,15.7834022831573,0.149516546043979,0,0,0.129159823477731,0,0.117357238645754,0,0,1.44950472495604,2.59227005632079,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr10:80857552..80857569,+ | |||
}} |
Latest revision as of 21:20, 4 August 2015
Short description: | p@chr10:80857552..80857569, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:80857552..80857569, + |
Coexpression cluster: | MCL_coexpression_mm9:1255 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.26e-19 | 6 |
gut absorptive cell | 3.26e-19 | 6 |
enterocyte | 3.26e-19 | 6 |
intestinal epithelial cell | 1.38e-16 | 9 |
epithelial cell of alimentary canal | 1.38e-16 | 9 |
columnar/cuboidal epithelial cell | 2.21e-16 | 7 |
epithelial cell | 5.66e-11 | 25 |
M cell of gut | 4.11e-10 | 3 |
endo-epithelial cell | 1.41e-09 | 15 |
endodermal cell | 5.99e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.22e-34 | 15 |
intestine | 1.56e-32 | 31 |
intestinal mucosa | 6.90e-28 | 13 |
wall of intestine | 6.90e-28 | 13 |
gastrointestinal system mucosa | 6.90e-28 | 13 |
organ component layer | 2.57e-20 | 24 |
gastrointestinal system | 3.91e-20 | 47 |
epithelium of mucosa | 1.38e-16 | 9 |
gastrointestinal system epithelium | 1.38e-16 | 9 |
intestinal epithelium | 1.38e-16 | 9 |
simple columnar epithelium | 2.10e-13 | 11 |
small intestine | 1.34e-12 | 4 |
ileal mucosa | 3.32e-10 | 3 |
ileum | 3.32e-10 | 3 |
mucosa of small intestine | 3.32e-10 | 3 |
wall of small intestine | 3.32e-10 | 3 |
gut-associated lymphoid tissue | 6.90e-08 | 2 |
mucosa-associated lymphoid tissue | 6.90e-08 | 2 |
lymphoid tissue | 6.90e-08 | 2 |
digestive system | 9.12e-08 | 116 |
digestive tract | 9.12e-08 | 116 |
primitive gut | 9.12e-08 | 116 |
endoderm-derived structure | 1.46e-07 | 118 |
endoderm | 1.46e-07 | 118 |
presumptive endoderm | 1.46e-07 | 118 |