FFCP PHASE1:Mm9::chr14:8826519..8826534,-: Difference between revisions
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{{FFCP|EntrezGene=13421|HGNC=|MCL_coexpression_id=259|UniProt=O55070|association_with_transcript=161bp_to_NM_007870,uc007sem.1_5end|description=CAGE_peak_1_at_Dnase1l3_5end|id=chr14:8826519..8826534,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.19e-16!130;UBERON:0000925!1.19e-16!130;UBERON:0006595!1.19e-16!130;UBERON:0001007!1.93e-15!128;UBERON:0001555!1.93e-15!128;UBERON:0007026!1.93e-15!128;UBERON:0004921!1.92e-14!126;UBERON:0004185!1.92e-14!126;UBERON:0002405!1.04e-11!70;UBERON:0000077!2.42e-11!97;UBERON:0005057!6.41e-11!51;UBERON:0001041!2.54e-10!92;UBERON:0002365!9.42e-09!25;UBERON:0002330!9.42e-09!25;UBERON:0009854!9.20e-08!23;UBERON:0009856!9.20e-08!23;UBERON:0005172!1.91e-07!49;UBERON:0005173!1.91e-07!49;UBERON:0002417!1.91e-07!49;UBERON:0000916!1.91e-07!49;UBERON:0002107!1.94e-07!22;UBERON:0007499!1.94e-07!22;UBERON:0006925!1.94e-07!22;UBERON:0009497!1.94e-07!22;UBERON:0000015!1.94e-07!22;UBERON:0002423!1.94e-07!22;UBERON:0006235!1.94e-07!22;UBERON:0008835!1.94e-07!22;UBERON:0003894!1.94e-07!22;UBERON:0004161!1.94e-07!22;UBERON:0008836!1.94e-07!22;UBERON:0005409!2.49e-07!59;UBERON:0002530!4.17e-07!65|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.52e-19,118;UBERON:0000925,3.52e-19,118;UBERON:0006595,3.52e-19,118;UBERON:0001007,1.07e-17,116;UBERON:0001555,1.07e-17,116;UBERON:0007026,1.07e-17,116;UBERON:0004921,1.77e-16,114;UBERON:0001041,3.85e-13,80;UBERON:0002365,8.76e-10,25;UBERON:0002330,8.76e-10,25;UBERON:0005409,6.90e-09,47;UBERON:0009854,1.44e-08,23;UBERON:0009856,1.44e-08,23;UBERON:0002107,3.62e-08,22;UBERON:0007499,3.62e-08,22;UBERON:0006925,3.62e-08,22;UBERON:0009497,3.62e-08,22;UBERON:0000015,3.62e-08,22;UBERON:0002423,3.62e-08,22;UBERON:0006235,3.62e-08,22;UBERON:0008835,3.62e-08,22;UBERON:0003894,3.62e-08,22;UBERON:0004161,3.62e-08,22;UBERON:0008836,3.62e-08,22;UBERON:0002530,3.95e-07,65;UBERON:0000077,4.60e-07,35;UBERON:0002193,5.50e-07,48;UBERON:0002405,5.50e-07,48|phase1_expression=0,0,0.909998478779072,0,0,0.671517087647559,0,0.258246646883153,0,0,0,0,0.513602189793617,0.262261207256992,21.6521345180181,10.7311891716608,2.79824751251259,16.4040325986284,18.2362196695633,18.6731446791133,2.63634199468316,0,0,12.1594241322989,18.3527424853736,1.14846392823004,0.430761996159075,0.215471232685889,4.3705386474966,3.02436155711917,5.76499327703792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1205214542355,1.45072428402269,1.68046899571232,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0.768436610643109,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,1.10115880999389,0,0.153606533256243,0,0,0,0,0,0.30559649555362,0,0,0.186399445825301,0.075726193333184,0.226714680320357,276.240857732699,154.87629785665,0,3.2382191498269,4.54843492213368,5.82434953226536,17.8364413567325,0,0,0,0,0,0,0,0,0,0,17.3559497172971,204.819865964913,5.04703272820404,0.520455980298408,0.608930956624282,0.691846491768175,1.3565037649736,0.940709657085638,0.376999773989026,7.41584903203122,0.578397427679647,0,0.485300549842228,1.10420759230197,0.969750506270444,5.59175283654366,0,0,28.1002760729451,0,0,0.127070227073065,0,0,0,0,0,0,0,0.305518091550949,0.870848794270651,0.252722758433675,0.420883711772948,0,0.229902104433473,0,1.05493372485001,0.0680364991513279,0,0,0,0,0,0,0,5.56094498451196,9.75106066262066,11.9353639116607,0.199034266818493,0.702213187313235,0,0,0,0,0,0,0.590292695242212,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0.324275238183423,0.146199987425332,0.219550115291051,0.402619256281115,0,0,7.26921322564356,10.8424732332053,0.213288250535234,0.232236671860439,0.902072229254653,1.4117846723634,2.2237804384487,3.61428689613862,22.302865892592,4.94096864172033,4.77536896720512,13.3300836267571,11.1129529657898,16.178749355776,21.3976669375947,19.9141273254367,0.189667900953082,0.456994050438915,0,0,0.387904974335251,0,0.379419222745544,0.738050739898011,1.41298855057237,0.370191491765402,25.791378556582,0.166845105716094,0.196558995113203,0.674586337154561,1.21716072833102,2.65294875727659,3.31013607315846,3.16465751195892,9.07957269940198,11.5315793538994,15.814502718009,31.2598396041543,24.9630138491648,27.7836765741823,31.7533421933785,27.4992807177119,1.66277871149944,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0.945810864637146,1.10732344824387,1.75400245523236,3.60499292374624,4.31712454664739,1.15719246865209,0,0,9.34352118736169,18.2118252561123,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.534196811001766,0,0.659880491890142,5.30980553359851,0,0,0.377210159511796,0.590603785761546,0.922305443831782,1.80899805217755,0.727067458955011,1.42598951353889,9.48110273807448,0,1.03135543248187,0.340439605753788,0,0,0,0,0.356737635204141,0.164549020602121,0,49.0463869853155,68.8454230307416,0.220528398054962,11.3771514529621,18.8913379234209,4.58378229453985,5.84924485615369,7.05805868903763,18.3632927076806,0,65.4435473455776,1.44470807574256,2.77791791054568,23.169320211577,52.2171949894316,64.2866666710329,0,0,0.552799895217695,5.72802370809068,0,0.203319467126849,1.83609079397062,3.13632444021703,8.29777742235475,6.74321731924104,7.52146447100557,5.75863072364865,5.83267379813068,6.21339313086926,0,0.149516546043979,0,0,0.129159823477731,0,0,0.781226309063701,0.104859344425711,0,0,26.8609452533952,5.6763060281246,4.93012594391171,5.45667456506739,6.26593434836185,8.74197961037565,13.2214994471966,10.7813354837441,9.59181274507402,10.287918898425,11.6958374758735,14.6186821109629,12.2189038883218,10.9864288050675,4.53460767230423,3.55177525398503,1.34570784914214,6.04384618910682,0.965947970160952,2.81523713176773,0.183151624267265,0.643105137237198,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.419226325255965,0.551530525350042,1.11123363900808,1.03017528619447,1.60459604795908,1.51618327058278,0.760437899670719,0.565879024158229,1.21733959710847,0.89635213366817,0.631790158511746,0.476293691283074,0.463537303779422,0.964546102318525,2.06042950401653,1.76638704161277,1.71434626192708,0.887379030796687,2.62279808942053,1.0174249164263,1.41164070622996,0.930760686808441,1.28049581010941,1.05227884575137,1.08643291076689,1.12228454331548,1.06771516311757,1.0835493061312,0.409231043169689,0.77468420592983,3.2794123866794,2.49810577937946,2.8071793013449,3.65280791882107,1.91288332068843,1.32354851471709,1.62307484934295|short_description=p1@Dnase1l3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13421 | |||
|HGNC= | |||
|MCL_coexpression_id=259 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O55070 | |||
|association_with_transcript=161bp_to_NM_007870,uc007sem.1_5end | |||
|cluster_id=chr14:8826519..8826534,- | |||
|description=CAGE_peak_1_at_Dnase1l3_5end | |||
|id=chr14:8826519..8826534,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.19e-16!130;UBERON:0000925!1.19e-16!130;UBERON:0006595!1.19e-16!130;UBERON:0001007!1.93e-15!128;UBERON:0001555!1.93e-15!128;UBERON:0007026!1.93e-15!128;UBERON:0004921!1.92e-14!126;UBERON:0004185!1.92e-14!126;UBERON:0002405!1.04e-11!70;UBERON:0000077!2.42e-11!97;UBERON:0005057!6.41e-11!51;UBERON:0001041!2.54e-10!92;UBERON:0002365!9.42e-09!25;UBERON:0002330!9.42e-09!25;UBERON:0009854!9.20e-08!23;UBERON:0009856!9.20e-08!23;UBERON:0005172!1.91e-07!49;UBERON:0005173!1.91e-07!49;UBERON:0002417!1.91e-07!49;UBERON:0000916!1.91e-07!49;UBERON:0002107!1.94e-07!22;UBERON:0007499!1.94e-07!22;UBERON:0006925!1.94e-07!22;UBERON:0009497!1.94e-07!22;UBERON:0000015!1.94e-07!22;UBERON:0002423!1.94e-07!22;UBERON:0006235!1.94e-07!22;UBERON:0008835!1.94e-07!22;UBERON:0003894!1.94e-07!22;UBERON:0004161!1.94e-07!22;UBERON:0008836!1.94e-07!22;UBERON:0005409!2.49e-07!59;UBERON:0002530!4.17e-07!65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.52e-19,118;UBERON:0000925,3.52e-19,118;UBERON:0006595,3.52e-19,118;UBERON:0001007,1.07e-17,116;UBERON:0001555,1.07e-17,116;UBERON:0007026,1.07e-17,116;UBERON:0004921,1.77e-16,114;UBERON:0001041,3.85e-13,80;UBERON:0002365,8.76e-10,25;UBERON:0002330,8.76e-10,25;UBERON:0005409,6.90e-09,47;UBERON:0009854,1.44e-08,23;UBERON:0009856,1.44e-08,23;UBERON:0002107,3.62e-08,22;UBERON:0007499,3.62e-08,22;UBERON:0006925,3.62e-08,22;UBERON:0009497,3.62e-08,22;UBERON:0000015,3.62e-08,22;UBERON:0002423,3.62e-08,22;UBERON:0006235,3.62e-08,22;UBERON:0008835,3.62e-08,22;UBERON:0003894,3.62e-08,22;UBERON:0004161,3.62e-08,22;UBERON:0008836,3.62e-08,22;UBERON:0002530,3.95e-07,65;UBERON:0000077,4.60e-07,35;UBERON:0002193,5.50e-07,48;UBERON:0002405,5.50e-07,48 | |||
|phase1_expression=0,0,0.909998478779072,0,0,0.671517087647559,0,0.258246646883153,0,0,0,0,0.513602189793617,0.262261207256992,21.6521345180181,10.7311891716608,2.79824751251259,16.4040325986284,18.2362196695633,18.6731446791133,2.63634199468316,0,0,12.1594241322989,18.3527424853736,1.14846392823004,0.430761996159075,0.215471232685889,4.3705386474966,3.02436155711917,5.76499327703792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1205214542355,1.45072428402269,1.68046899571232,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0.768436610643109,0,0,0,0.285650984403804,0.220868540951614,0.122490799214954,0,0,1.10115880999389,0,0.153606533256243,0,0,0,0,0,0.30559649555362,0,0,0.186399445825301,0.075726193333184,0.226714680320357,276.240857732699,154.87629785665,0,3.2382191498269,4.54843492213368,5.82434953226536,17.8364413567325,0,0,0,0,0,0,0,0,0,0,17.3559497172971,204.819865964913,5.04703272820404,0.520455980298408,0.608930956624282,0.691846491768175,1.3565037649736,0.940709657085638,0.376999773989026,7.41584903203122,0.578397427679647,0,0.485300549842228,1.10420759230197,0.969750506270444,5.59175283654366,0,0,28.1002760729451,0,0,0.127070227073065,0,0,0,0,0,0,0,0.305518091550949,0.870848794270651,0.252722758433675,0.420883711772948,0,0.229902104433473,0,1.05493372485001,0.0680364991513279,0,0,0,0,0,0,0,5.56094498451196,9.75106066262066,11.9353639116607,0.199034266818493,0.702213187313235,0,0,0,0,0,0,0.590292695242212,0.154267112887378,0,0.268273401399619,0,0,0.164167464079095,0.324275238183423,0.146199987425332,0.219550115291051,0.402619256281115,0,0,7.26921322564356,10.8424732332053,0.213288250535234,0.232236671860439,0.902072229254653,1.4117846723634,2.2237804384487,3.61428689613862,22.302865892592,4.94096864172033,4.77536896720512,13.3300836267571,11.1129529657898,16.178749355776,21.3976669375947,19.9141273254367,0.189667900953082,0.456994050438915,0,0,0.387904974335251,0,0.379419222745544,0.738050739898011,1.41298855057237,0.370191491765402,25.791378556582,0.166845105716094,0.196558995113203,0.674586337154561,1.21716072833102,2.65294875727659,3.31013607315846,3.16465751195892,9.07957269940198,11.5315793538994,15.814502718009,31.2598396041543,24.9630138491648,27.7836765741823,31.7533421933785,27.4992807177119,1.66277871149944,0,0,0,0.234690248288502,0.167506257441816,0.238043640886014,0,0.945810864637146,1.10732344824387,1.75400245523236,3.60499292374624,4.31712454664739,1.15719246865209,0,0,9.34352118736169,18.2118252561123,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.534196811001766,0,0.659880491890142,5.30980553359851,0,0,0.377210159511796,0.590603785761546,0.922305443831782,1.80899805217755,0.727067458955011,1.42598951353889,9.48110273807448,0,1.03135543248187,0.340439605753788,0,0,0,0,0.356737635204141,0.164549020602121,0,49.0463869853155,68.8454230307416,0.220528398054962,11.3771514529621,18.8913379234209,4.58378229453985,5.84924485615369,7.05805868903763,18.3632927076806,0,65.4435473455776,1.44470807574256,2.77791791054568,23.169320211577,52.2171949894316,64.2866666710329,0,0,0.552799895217695,5.72802370809068,0,0.203319467126849,1.83609079397062,3.13632444021703,8.29777742235475,6.74321731924104,7.52146447100557,5.75863072364865,5.83267379813068,6.21339313086926,0,0.149516546043979,0,0,0.129159823477731,0,0,0.781226309063701,0.104859344425711,0,0,26.8609452533952,5.6763060281246,4.93012594391171,5.45667456506739,6.26593434836185,8.74197961037565,13.2214994471966,10.7813354837441,9.59181274507402,10.287918898425,11.6958374758735,14.6186821109629,12.2189038883218,10.9864288050675,4.53460767230423,3.55177525398503,1.34570784914214,6.04384618910682,0.965947970160952,2.81523713176773,0.183151624267265,0.643105137237198,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.486213434136588,0.419226325255965,0.551530525350042,1.11123363900808,1.03017528619447,1.60459604795908,1.51618327058278,0.760437899670719,0.565879024158229,1.21733959710847,0.89635213366817,0.631790158511746,0.476293691283074,0.463537303779422,0.964546102318525,2.06042950401653,1.76638704161277,1.71434626192708,0.887379030796687,2.62279808942053,1.0174249164263,1.41164070622996,0.930760686808441,1.28049581010941,1.05227884575137,1.08643291076689,1.12228454331548,1.06771516311757,1.0835493061312,0.409231043169689,0.77468420592983,3.2794123866794,2.49810577937946,2.8071793013449,3.65280791882107,1.91288332068843,1.32354851471709,1.62307484934295 | |||
|short_description=p1@Dnase1l3 | |||
}} |
Revision as of 21:25, 4 August 2015
Short description: | p1@Dnase1l3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dnase1l3_5end |
Coexpression cluster: | MCL_coexpression_mm9:259 |
Association with transcript: | 161bp_to_NM_007870, uc007sem.1_5end |
EntrezGene: | 13421 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.52e-19 | 118 |
endoderm | 3.52e-19 | 118 |
presumptive endoderm | 3.52e-19 | 118 |
digestive system | 1.07e-17 | 116 |
digestive tract | 1.07e-17 | 116 |
primitive gut | 1.07e-17 | 116 |
subdivision of digestive tract | 1.77e-16 | 114 |
foregut | 3.85e-13 | 80 |
exocrine gland | 8.76e-10 | 25 |
exocrine system | 8.76e-10 | 25 |
gastrointestinal system | 6.90e-09 | 47 |
digestive tract diverticulum | 1.44e-08 | 23 |
sac | 1.44e-08 | 23 |
liver | 3.62e-08 | 22 |
epithelial sac | 3.62e-08 | 22 |
digestive gland | 3.62e-08 | 22 |
epithelium of foregut-midgut junction | 3.62e-08 | 22 |
anatomical boundary | 3.62e-08 | 22 |
hepatobiliary system | 3.62e-08 | 22 |
foregut-midgut junction | 3.62e-08 | 22 |
hepatic diverticulum | 3.62e-08 | 22 |
liver primordium | 3.62e-08 | 22 |
septum transversum | 3.62e-08 | 22 |
liver bud | 3.62e-08 | 22 |
gland | 3.95e-07 | 65 |
mixed endoderm/mesoderm-derived structure | 4.60e-07 | 35 |
hemolymphoid system | 5.50e-07 | 48 |
immune system | 5.50e-07 | 48 |