FFCP PHASE1:Mm9::chr2:26236120..26236174,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=227644|HGNC=|UniProt=Q8BP86,A2AIV6|association_with_transcript=0bp_to_ENSMUST00000035427,ENSMUST00000114115,ENSMUST00000124843,ENSMUST00000149850,ENSMUST00000150121,ENSMUST00000155643,NM_172339,NR_033572,uc008iuv.2,uc008iuw.2_5end|description=CAGE_peak_1_at_Snapc4_5end|id=chr2:26236120..26236174,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!8.86e-10!94;UBERON:0002553!1.47e-08!39;UBERON:0003886!2.23e-08!38;UBERON:0007811!3.45e-08!86;UBERON:0002323!7.74e-08!37;UBERON:0004458!7.74e-08!37;UBERON:0000475!1.16e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0002553,1.47e-08,39;UBERON:0003886,2.23e-08,38;UBERON:0002323,7.74e-08,37;UBERON:0004458,7.74e-08,37|phase1_expression=16.8156289460034,1.74487703819681,2.72999543633722,2.72217790176147,1.50268718983904,14.1018588405987,11.6806320297763,32.6682008307188,68.000952799255,92.2214233708654,77.7329575743793,85.7550709199866,38.0065620447277,44.5844052336887,20.3196954707554,19.6401009368131,16.7894850750755,33.9121827760106,38.5291558432126,38.6194583136207,23.3018615013931,17.8723712161594,20.6347833419759,10.3995074815714,9.63518980482114,2.29692785646008,3.4460959692726,3.66301095566011,8.7410772949932,6.30075324399827,9.75614246883341,47.6273005094723,60.8914139708724,15.8481681015439,17.0422455653252,12.3013637565284,16.3335485009895,3.34825304589526,0,3.66466620781659,1.76469446409304,5.46436387966757,7.2826552954673,20.8988717839458,19.0588630692687,16.702754446713,4.69434806608824,4.14247797122848,7.24964403023757,9.91592485278845,7.27929392451885,8.62515386189829,28.1874778176997,27.5637613964311,30.2484419228218,10.2903774414379,16.0458726365704,11.3447860301037,17.1968991730658,21.6886301501533,18.3811107016792,8.4711133017283,4.4464739805557,6.74924787961049,12.8552627133707,6.3943210345149,5.99200221036809,7.30014780110954,18.7678198278345,19.5758610580951,12.1988477583802,21.4238238302853,24.0746709637259,17.0262210908786,18.0189485514284,20.2228133054205,27.5289702498472,25.5374676170375,21.1977015893616,21.4974649000216,19.1209175129036,19.2737947106001,16.1926139420801,24.7615548413939,22.9197371665215,26.5165726926301,25.4845308630394,20.8767379324337,16.5083101466341,9.3708734532414,21.4499721639242,10.3250865237766,13.599426674155,10.7940638327563,12.9955283489534,10.7526452903361,11.9377757111989,15.8500199997594,12.4697282209377,9.18682893726885,16.3378366940949,12.8326477414318,15.2883143823987,7.11066703153331,7.36069539438128,8.10751569520315,5.05524445014783,10.2765491747154,47.1266948237853,25.6804900582147,17.1750473498474,19.485790611977,15.912469310668,19.7446659123936,25.8695155698551,14.4516580029127,14.8316980640624,19.665512541108,13.2691582792481,15.3678507450039,14.575540218386,21.819386391085,16.775258509631,46.552146724836,40.0043210013699,12.0064815948038,19.0506047964413,9.59844369589452,16.9003402007176,47.9330046095433,42.0900554593136,33.1727489577962,44.8466746096073,46.7959286914505,33.2460871295296,38.7756618731941,25.2561622348784,21.1491850037158,48.7754923776992,21.4650693004203,26.9349316932797,19.5416788768452,18.546399369951,26.0719334855787,27.0104901630772,29.85049682637,20.052169055782,35.1836584205061,20.0478233427543,30.8242910673545,31.1433489770189,23.4539433697505,39.7607566392605,24.3776516565517,22.2244707320579,26.0734889532226,18.2575428701441,17.4996576838006,21.596425954065,18.0199422105887,22.7490278181663,17.1058958387964,23.9112182941062,23.0214151144462,16.8151153047242,18.1376476905318,16.6329508867764,17.1645053279739,15.1395061920402,17.7300861205423,17.1865876237214,17.3977985036145,16.9053588774109,14.8969124824013,45.4226288898515,35.6049958832324,6.27795687669216,14.8092317331585,27.3008960685099,27.6361639513922,24.6136851125198,25.8154911517878,19.5692678583486,18.0714344806931,9.96511029243474,11.0348299665087,15.0801125280162,19.0998213159505,21.6410136702223,10.7858329038507,12.752144942607,14.5373129475688,28.4501851429623,23.0781995471652,21.4144697778853,22.8089487186752,26.7654432291324,21.1810176068762,20.3621649540108,21.1082511610831,15.8568715119789,18.7563689161137,19.2694207606647,29.6984288174647,27.9113773060748,28.1077640481067,19.2717115319078,23.6353616557368,21.8978232532021,18.1248566594011,25.1309601501305,12.3552635934637,14.3768206527355,18.6070473834252,18.7222603868736,16.9227848224565,15.4281775628844,17.8504102904446,21.6161232494927,22.3599865889172,29.3336957595647,24.4432923516271,29.5709712843513,25.1259386162724,18.8054476299951,18.1474292507753,26.0097987775215,23.9181864820677,18.656207932926,22.1215474866246,17.0958132047237,18.949026674178,16.5870412333199,13.5976420954677,32.9482062922754,31.4567890787395,30.5046120976805,30.1234034541962,10.8197063948606,11.6136626514012,14.8288863125641,12.8844785617891,13.5716740571663,10.9925647058174,17.1554979043443,16.1353622549635,16.1924280669958,15.4895604692995,16.2067988958075,45.6276269318966,28.8138372972785,25.819512531752,23.6186091062685,36.4583971769303,33.1862845849907,26.220308704738,25.0928552280743,28.4793670431406,37.2080385029774,26.1319875752338,31.0113951801865,29.8097658171555,28.8762876491624,41.0847785316561,22.1379078007497,23.721174947083,26.5542892487955,19.2665370613502,25.2249433376371,17.5756368725906,21.2808280370728,19.7989387538298,20.8977256164694,18.8768268451052,23.7018425144347,18.85305430688,27.7865781549252,23.4138479176902,27.7718813916958,19.6620135265788,19.9351814485238,22.4873032650734,16.3229268512716,27.999220603587,20.846247457338,23.1153292118809,28.5199572149356,24.8646363246192,27.338845544205,23.7929300134784,19.2075625893056,20.2929605869304,17.4131966993574,14.3200592702267,28.7865754158833,28.261405930632,24.4092070257271,23.8360657456494,20.9628061196331,19.9599232649535,21.3245915771367,14.6583327511057,18.5349411807264,26.0962511496509,19.7292528539467,29.6042761167078,23.8260226258221,29.5565806282952,20.2780922860038,27.5398484549968,32.6253123435196,25.2596506597263,36.8056298934245,31.8891039490328,27.0748205882394,28.7570119771642,22.9079493277886,26.8075598200199,24.1652730738699,23.810550523775,20.4641795424703,23.5583081059139,25.4025986740273,29.2802704849628,26.8247959425599,28.7354627639995,26.6060014419524,22.7059946271178,29.1023486432107,17.9117003056017,22.4205812907805,35.8855426437903,24.6790386055195,25.1146472241848,20.8327547750812,26.0075306459516,22.2943114242228,39.6241962187937,41.2268845110459,34.5243927380383,40.6755814541972,27.49650917499,32.1988784292202,40.0358765616541,39.8263275136765,39.6282658837314,48.4862377613099,41.4208249401456,13.2847804907746,30.7249152518794,25.6100408631201,23.8244582726928,20.3324767749143,10.8467669985508,22.8914129635664,27.6086976700118,32.0919209591815,16.4253187646468,27.3757643881459,23.7669190146456,20.9756976732537,21.064275141202,20.5044624171539,20.9569224164552,19.5844510846806,20.8341958100801,19.3680373377554,23.4046283013692,25.7151939289062,25.3790402807853,22.4130018550482,28.3425512433041,22.8685794409253,20.8998081492441,25.7928441750609,27.3592499895357,22.9508952399506,25.812544496256,19.8120480267371,18.6173471689815,22.5077073743329,16.5782420068984,18.9048478761519,26.2301106834843,21.0538447600868,23.2060738372162,25.0587715010185,19.4120448825174,13.9120701372253|short_description=p1@Snapc4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:227644 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BP86,uniprot:A2AIV6 | |||
|association_with_transcript=0bp_to_ENSMUST00000035427,ENSMUST00000114115,ENSMUST00000124843,ENSMUST00000149850,ENSMUST00000150121,ENSMUST00000155643,NM_172339,NR_033572,uc008iuv.2,uc008iuw.2_5end | |||
|cluster_id=chr2:26236120..26236174,- | |||
|description=CAGE_peak_1_at_Snapc4_5end | |||
|id=chr2:26236120..26236174,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!8.86e-10!94;UBERON:0002553!1.47e-08!39;UBERON:0003886!2.23e-08!38;UBERON:0007811!3.45e-08!86;UBERON:0002323!7.74e-08!37;UBERON:0004458!7.74e-08!37;UBERON:0000475!1.16e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002553,1.47e-08,39;UBERON:0003886,2.23e-08,38;UBERON:0002323,7.74e-08,37;UBERON:0004458,7.74e-08,37 | |||
|phase1_expression=16.8156289460034,1.74487703819681,2.72999543633722,2.72217790176147,1.50268718983904,14.1018588405987,11.6806320297763,32.6682008307188,68.000952799255,92.2214233708654,77.7329575743793,85.7550709199866,38.0065620447277,44.5844052336887,20.3196954707554,19.6401009368131,16.7894850750755,33.9121827760106,38.5291558432126,38.6194583136207,23.3018615013931,17.8723712161594,20.6347833419759,10.3995074815714,9.63518980482114,2.29692785646008,3.4460959692726,3.66301095566011,8.7410772949932,6.30075324399827,9.75614246883341,47.6273005094723,60.8914139708724,15.8481681015439,17.0422455653252,12.3013637565284,16.3335485009895,3.34825304589526,0,3.66466620781659,1.76469446409304,5.46436387966757,7.2826552954673,20.8988717839458,19.0588630692687,16.702754446713,4.69434806608824,4.14247797122848,7.24964403023757,9.91592485278845,7.27929392451885,8.62515386189829,28.1874778176997,27.5637613964311,30.2484419228218,10.2903774414379,16.0458726365704,11.3447860301037,17.1968991730658,21.6886301501533,18.3811107016792,8.4711133017283,4.4464739805557,6.74924787961049,12.8552627133707,6.3943210345149,5.99200221036809,7.30014780110954,18.7678198278345,19.5758610580951,12.1988477583802,21.4238238302853,24.0746709637259,17.0262210908786,18.0189485514284,20.2228133054205,27.5289702498472,25.5374676170375,21.1977015893616,21.4974649000216,19.1209175129036,19.2737947106001,16.1926139420801,24.7615548413939,22.9197371665215,26.5165726926301,25.4845308630394,20.8767379324337,16.5083101466341,9.3708734532414,21.4499721639242,10.3250865237766,13.599426674155,10.7940638327563,12.9955283489534,10.7526452903361,11.9377757111989,15.8500199997594,12.4697282209377,9.18682893726885,16.3378366940949,12.8326477414318,15.2883143823987,7.11066703153331,7.36069539438128,8.10751569520315,5.05524445014783,10.2765491747154,47.1266948237853,25.6804900582147,17.1750473498474,19.485790611977,15.912469310668,19.7446659123936,25.8695155698551,14.4516580029127,14.8316980640624,19.665512541108,13.2691582792481,15.3678507450039,14.575540218386,21.819386391085,16.775258509631,46.552146724836,40.0043210013699,12.0064815948038,19.0506047964413,9.59844369589452,16.9003402007176,47.9330046095433,42.0900554593136,33.1727489577962,44.8466746096073,46.7959286914505,33.2460871295296,38.7756618731941,25.2561622348784,21.1491850037158,48.7754923776992,21.4650693004203,26.9349316932797,19.5416788768452,18.546399369951,26.0719334855787,27.0104901630772,29.85049682637,20.052169055782,35.1836584205061,20.0478233427543,30.8242910673545,31.1433489770189,23.4539433697505,39.7607566392605,24.3776516565517,22.2244707320579,26.0734889532226,18.2575428701441,17.4996576838006,21.596425954065,18.0199422105887,22.7490278181663,17.1058958387964,23.9112182941062,23.0214151144462,16.8151153047242,18.1376476905318,16.6329508867764,17.1645053279739,15.1395061920402,17.7300861205423,17.1865876237214,17.3977985036145,16.9053588774109,14.8969124824013,45.4226288898515,35.6049958832324,6.27795687669216,14.8092317331585,27.3008960685099,27.6361639513922,24.6136851125198,25.8154911517878,19.5692678583486,18.0714344806931,9.96511029243474,11.0348299665087,15.0801125280162,19.0998213159505,21.6410136702223,10.7858329038507,12.752144942607,14.5373129475688,28.4501851429623,23.0781995471652,21.4144697778853,22.8089487186752,26.7654432291324,21.1810176068762,20.3621649540108,21.1082511610831,15.8568715119789,18.7563689161137,19.2694207606647,29.6984288174647,27.9113773060748,28.1077640481067,19.2717115319078,23.6353616557368,21.8978232532021,18.1248566594011,25.1309601501305,12.3552635934637,14.3768206527355,18.6070473834252,18.7222603868736,16.9227848224565,15.4281775628844,17.8504102904446,21.6161232494927,22.3599865889172,29.3336957595647,24.4432923516271,29.5709712843513,25.1259386162724,18.8054476299951,18.1474292507753,26.0097987775215,23.9181864820677,18.656207932926,22.1215474866246,17.0958132047237,18.949026674178,16.5870412333199,13.5976420954677,32.9482062922754,31.4567890787395,30.5046120976805,30.1234034541962,10.8197063948606,11.6136626514012,14.8288863125641,12.8844785617891,13.5716740571663,10.9925647058174,17.1554979043443,16.1353622549635,16.1924280669958,15.4895604692995,16.2067988958075,45.6276269318966,28.8138372972785,25.819512531752,23.6186091062685,36.4583971769303,33.1862845849907,26.220308704738,25.0928552280743,28.4793670431406,37.2080385029774,26.1319875752338,31.0113951801865,29.8097658171555,28.8762876491624,41.0847785316561,22.1379078007497,23.721174947083,26.5542892487955,19.2665370613502,25.2249433376371,17.5756368725906,21.2808280370728,19.7989387538298,20.8977256164694,18.8768268451052,23.7018425144347,18.85305430688,27.7865781549252,23.4138479176902,27.7718813916958,19.6620135265788,19.9351814485238,22.4873032650734,16.3229268512716,27.999220603587,20.846247457338,23.1153292118809,28.5199572149356,24.8646363246192,27.338845544205,23.7929300134784,19.2075625893056,20.2929605869304,17.4131966993574,14.3200592702267,28.7865754158833,28.261405930632,24.4092070257271,23.8360657456494,20.9628061196331,19.9599232649535,21.3245915771367,14.6583327511057,18.5349411807264,26.0962511496509,19.7292528539467,29.6042761167078,23.8260226258221,29.5565806282952,20.2780922860038,27.5398484549968,32.6253123435196,25.2596506597263,36.8056298934245,31.8891039490328,27.0748205882394,28.7570119771642,22.9079493277886,26.8075598200199,24.1652730738699,23.810550523775,20.4641795424703,23.5583081059139,25.4025986740273,29.2802704849628,26.8247959425599,28.7354627639995,26.6060014419524,22.7059946271178,29.1023486432107,17.9117003056017,22.4205812907805,35.8855426437903,24.6790386055195,25.1146472241848,20.8327547750812,26.0075306459516,22.2943114242228,39.6241962187937,41.2268845110459,34.5243927380383,40.6755814541972,27.49650917499,32.1988784292202,40.0358765616541,39.8263275136765,39.6282658837314,48.4862377613099,41.4208249401456,13.2847804907746,30.7249152518794,25.6100408631201,23.8244582726928,20.3324767749143,10.8467669985508,22.8914129635664,27.6086976700118,32.0919209591815,16.4253187646468,27.3757643881459,23.7669190146456,20.9756976732537,21.064275141202,20.5044624171539,20.9569224164552,19.5844510846806,20.8341958100801,19.3680373377554,23.4046283013692,25.7151939289062,25.3790402807853,22.4130018550482,28.3425512433041,22.8685794409253,20.8998081492441,25.7928441750609,27.3592499895357,22.9508952399506,25.812544496256,19.8120480267371,18.6173471689815,22.5077073743329,16.5782420068984,18.9048478761519,26.2301106834843,21.0538447600868,23.2060738372162,25.0587715010185,19.4120448825174,13.9120701372253 | |||
|short_description=p1@Snapc4 | |||
}} |
Revision as of 21:33, 4 August 2015
Short description: | p1@Snapc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Snapc4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000035427, ENSMUST00000114115, ENSMUST00000124843, ENSMUST00000149850, ENSMUST00000150121, ENSMUST00000155643, NM_172339, NR_033572, uc008iuv.2, uc008iuw.2_5end |
EntrezGene: | 227644 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical cavity | 1.47e-08 | 39 |
body cavity precursor | 2.23e-08 | 38 |
body cavity | 7.74e-08 | 37 |
body cavity or lining | 7.74e-08 | 37 |