FFCP PHASE1:Mm9::chr14:99713944..99713948,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1985|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:99713944..99713948,+|id=chr14:99713944..99713948,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,2.37e-09,9;CL:0002251,2.37e-09,9;CL:0002076,2.42e-09,15;CL:0000066,4.81e-09,25;CL:0000223,6.00e-07,20;CL:0000075,9.12e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!9.32e-12!59;UBERON:0000160!5.77e-11!43;UBERON:0000344!5.36e-10!15;UBERON:0001242!1.28e-08!13;UBERON:0000060!1.28e-08!13;UBERON:0001262!1.28e-08!13;UBERON:0004786!1.28e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.47e-26,47;UBERON:0000160,1.62e-25,31;UBERON:0000344,2.79e-15,15;UBERON:0001242,4.81e-13,13;UBERON:0001262,4.81e-13,13;UBERON:0004786,4.81e-13,13;UBERON:0004119,1.87e-12,118;UBERON:0000925,1.87e-12,118;UBERON:0006595,1.87e-12,118;UBERON:0001007,1.32e-11,116;UBERON:0001555,1.32e-11,116;UBERON:0007026,1.32e-11,116;UBERON:0004923,3.17e-11,24;UBERON:0004921,2.63e-10,114;UBERON:0003350,2.37e-09,9;UBERON:0004808,2.37e-09,9;UBERON:0001277,2.37e-09,9;UBERON:0000485,1.88e-08,11|phase1_expression=0,3.48975407639361,7.73498706962211,3.32710632437513,5.00895729946347,3.3575854382378,6.77476657727024,0,0.140788722151667,0.234064526321993,0,0,0,0,0.666219523631325,0.202475267389826,0,0.157731082679119,0,0,0.0850432901510698,0.0992909512008853,0,13.4393635146462,15.3704218315004,6.89078356938024,6.03066794622705,5.17130958446134,25.6531616266105,18.9022597319948,11.5299865540758,0,0,0,5.19932915552294,7.64679368649065,6.53341940039581,3.76678467663217,0.7813353445238,1.57057123192139,2.35292595212406,2.04913645487534,1.45653105909346,0.125896817975577,0.506884656097573,0.183546752161682,1.56478268869608,0.218025156380447,0.659058548203415,0.58328969722285,1.67983705950435,0,0,0,0,0.771778308107841,0,0,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0,0,0.7104801149461,1.19840044207362,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0,0,0.191690942036473,0.919218786610021,0,0.127687338085188,0,0.131886287730194,0.274462930807229,0.52091337055676,0.279182999001381,0.56276261003168,0,0,0.142371680799103,0.186399445825301,1.36307147999731,0.831287161174641,1.15945795480671,0,0,0,0,0,0.561777680527007,0.170430322578058,0,0.35333957451034,1.12674735821344,0,0,0,14.7213907887626,14.4415123320806,24.2651733607096,2.51204535381932,0,0.148442139064825,1.21439728736295,0.608930956624282,1.15307748628029,0.452167921657868,1.41106448562846,0,5.6854842578906,0,0,0,0.220841518460394,0,3.72783522436244,0,0.209446706813455,4.85368404896324,0.11981512450592,0,0.127070227073065,0,0,1.13088916901578,0.869121600961382,0.255715457330331,0.20778804455956,0.324482526135515,0.916554274652847,0.622034853050465,0,0.631325567659422,0.130120442962704,0.229902104433473,1.0803727788321,0.452114453507145,0.204109497453984,0.384341160854549,0.374806898238915,0.258703370739016,0,0.189106080167819,0.351902248327898,0.876782929710299,1.11218899690239,0.696504333044333,1.02891068203972,0.59710280045548,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0.462801338662135,0,0,0.116765342367169,0.16455984991348,0,0,0.292399974850665,0,0,0,0,1.32167513193519,7.1401652999157,0.853153002140936,2.32236671860439,0.77320476793256,2.8235693447268,3.7804267453628,3.61428689613862,13.2868137232463,4.77626968699632,8.79673230800943,5.76973768919337,4.874102177978,9.88701349519644,15.3458015411033,7.36822711041159,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.280543279561274,0.316182685621286,0.147610147979602,0.470996183524124,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.923765950833023,0,0,0.848725428875941,3.05097322775053,1.17254380209271,0.714130922658041,0.975668239288994,0.630540576424764,1.55025282754142,0.318909537314974,1.3109065177259,0.863424909329478,1.59113964439663,0,0,0.491764273019036,0.827810238914197,0.160550589987792,0,0.655739781506702,0.504941854408746,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,1.42452482933804,0.651547837414304,0.824850614862677,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0,1.03371317267288,0.363533729477506,0.712994756769443,0,0,0,0.340439605753788,0.18006109403131,0.776152102696527,2.14337035031592,0,1.07021290561242,0.658196082408484,0.913394847343798,1.87737366450968,1.27099242518292,0.220528398054962,1.81374878235628,1.45317984026315,1.74907482291652,3.70054266409723,2.1338316966858,6.99554007911642,0.18542530201051,0,0,0,0.188368457004691,0.27338845544205,0,0.509935289981566,0,0.276399947608848,4.77335309007557,0.474503990371703,1.01659733563424,6.15630442684267,3.55450103224597,4.14888871117737,4.5853877770839,3.38879168473877,4.18809507174447,11.4061176496778,0.621339313086926,0.56369293868419,0.598066184175915,0.165458490457098,0,0.387479470433193,0.506868376472335,0.352071715937262,0.13020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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1985 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:99713944..99713948,+ | |||
|description=CAGE_peak_at_chr14:99713944..99713948,+ | |||
|id=chr14:99713944..99713948,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.37e-09,9;CL:0002251,2.37e-09,9;CL:0002076,2.42e-09,15;CL:0000066,4.81e-09,25;CL:0000223,6.00e-07,20;CL:0000075,9.12e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!9.32e-12!59;UBERON:0000160!5.77e-11!43;UBERON:0000344!5.36e-10!15;UBERON:0001242!1.28e-08!13;UBERON:0000060!1.28e-08!13;UBERON:0001262!1.28e-08!13;UBERON:0004786!1.28e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.47e-26,47;UBERON:0000160,1.62e-25,31;UBERON:0000344,2.79e-15,15;UBERON:0001242,4.81e-13,13;UBERON:0001262,4.81e-13,13;UBERON:0004786,4.81e-13,13;UBERON:0004119,1.87e-12,118;UBERON:0000925,1.87e-12,118;UBERON:0006595,1.87e-12,118;UBERON:0001007,1.32e-11,116;UBERON:0001555,1.32e-11,116;UBERON:0007026,1.32e-11,116;UBERON:0004923,3.17e-11,24;UBERON:0004921,2.63e-10,114;UBERON:0003350,2.37e-09,9;UBERON:0004808,2.37e-09,9;UBERON:0001277,2.37e-09,9;UBERON:0000485,1.88e-08,11 | |||
|phase1_expression=0,3.48975407639361,7.73498706962211,3.32710632437513,5.00895729946347,3.3575854382378,6.77476657727024,0,0.140788722151667,0.234064526321993,0,0,0,0,0.666219523631325,0.202475267389826,0,0.157731082679119,0,0,0.0850432901510698,0.0992909512008853,0,13.4393635146462,15.3704218315004,6.89078356938024,6.03066794622705,5.17130958446134,25.6531616266105,18.9022597319948,11.5299865540758,0,0,0,5.19932915552294,7.64679368649065,6.53341940039581,3.76678467663217,0.7813353445238,1.57057123192139,2.35292595212406,2.04913645487534,1.45653105909346,0.125896817975577,0.506884656097573,0.183546752161682,1.56478268869608,0.218025156380447,0.659058548203415,0.58328969722285,1.67983705950435,0,0,0,0,0.771778308107841,0,0,0.202316460859598,0,0,0.338844532069132,0.889294796111139,0,0,0.7104801149461,1.19840044207362,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0,0,0.191690942036473,0.919218786610021,0,0.127687338085188,0,0.131886287730194,0.274462930807229,0.52091337055676,0.279182999001381,0.56276261003168,0,0,0.142371680799103,0.186399445825301,1.36307147999731,0.831287161174641,1.15945795480671,0,0,0,0,0,0.561777680527007,0.170430322578058,0,0.35333957451034,1.12674735821344,0,0,0,14.7213907887626,14.4415123320806,24.2651733607096,2.51204535381932,0,0.148442139064825,1.21439728736295,0.608930956624282,1.15307748628029,0.452167921657868,1.41106448562846,0,5.6854842578906,0,0,0,0.220841518460394,0,3.72783522436244,0,0.209446706813455,4.85368404896324,0.11981512450592,0,0.127070227073065,0,0,1.13088916901578,0.869121600961382,0.255715457330331,0.20778804455956,0.324482526135515,0.916554274652847,0.622034853050465,0,0.631325567659422,0.130120442962704,0.229902104433473,1.0803727788321,0.452114453507145,0.204109497453984,0.384341160854549,0.374806898238915,0.258703370739016,0,0.189106080167819,0.351902248327898,0.876782929710299,1.11218899690239,0.696504333044333,1.02891068203972,0.59710280045548,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0.462801338662135,0,0,0.116765342367169,0.16455984991348,0,0,0.292399974850665,0,0,0,0,1.32167513193519,7.1401652999157,0.853153002140936,2.32236671860439,0.77320476793256,2.8235693447268,3.7804267453628,3.61428689613862,13.2868137232463,4.77626968699632,8.79673230800943,5.76973768919337,4.874102177978,9.88701349519644,15.3458015411033,7.36822711041159,0,0.114248512609729,0,0.203651327845314,0.387904974335251,0.280543279561274,0.316182685621286,0.147610147979602,0.470996183524124,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.923765950833023,0,0,0.848725428875941,3.05097322775053,1.17254380209271,0.714130922658041,0.975668239288994,0.630540576424764,1.55025282754142,0.318909537314974,1.3109065177259,0.863424909329478,1.59113964439663,0,0,0.491764273019036,0.827810238914197,0.160550589987792,0,0.655739781506702,0.504941854408746,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,1.42452482933804,0.651547837414304,0.824850614862677,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0,1.03371317267288,0.363533729477506,0.712994756769443,0,0,0,0.340439605753788,0.18006109403131,0.776152102696527,2.14337035031592,0,1.07021290561242,0.658196082408484,0.913394847343798,1.87737366450968,1.27099242518292,0.220528398054962,1.81374878235628,1.45317984026315,1.74907482291652,3.70054266409723,2.1338316966858,6.99554007911642,0.18542530201051,0,0,0,0.188368457004691,0.27338845544205,0,0.509935289981566,0,0.276399947608848,4.77335309007557,0.474503990371703,1.01659733563424,6.15630442684267,3.55450103224597,4.14888871117737,4.5853877770839,3.38879168473877,4.18809507174447,11.4061176496778,0.621339313086926,0.56369293868419,0.598066184175915,0.165458490457098,0,0.387479470433193,0.506868376472335,0.352071715937262,0.13020438484395,0,0.241584120826006,0,0,0,0.616265742988964,0.129920822977795,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0.116876902181569,2.0405734525369,1.55390167361845,3.13998498133165,0.839423081820392,2.70465431645067,2.25218970541418,1.09890974560359,2.78678892802786,1.00314420807073,0,0.460325236507177,0.572895513439397,1.3748254587495,0,2.2661816921691,1.35004500046361,0,0.906284817968409,1.03552062350364,0.31136204275253,0,0.170733605754134,0.972426868273176,0.628839487883947,0.735374033800057,0.44449345560323,0.206035057238894,0,0.758091635291392,0.50695859978048,0.377252682772152,0.280924522409647,0.640251524048693,0.689225627467359,0,0.927074607558844,1.35036454324594,0.412085900803307,0.147198920134397,1.37147700954166,0.887379030796687,0.953744759789284,0.581385666529314,0.564656282491984,0.676916863133412,1.64635175585495,0.526139422875686,1.7654534799962,0.561142271657738,0.355905054372522,0.689531376628944,1.22769312950907,0.77468420592983,1.92906610981141,0.499621155875892,0.233931608445408,0.644613162144895,0.765153328275374,0.661774257358546,0.463735671240843 | |||
|short_description=p@chr14:99713944..99713948,+ | |||
}} |
Latest revision as of 22:22, 4 August 2015
Short description: | p@chr14:99713944..99713948, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:99713944..99713948, + |
Coexpression cluster: | MCL_coexpression_mm9:1985 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.37e-09 | 9 |
epithelial cell of alimentary canal | 2.37e-09 | 9 |
endo-epithelial cell | 2.42e-09 | 15 |
epithelial cell | 4.81e-09 | 25 |
endodermal cell | 6.00e-07 | 20 |
columnar/cuboidal epithelial cell | 9.12e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.47e-26 | 47 |
intestine | 1.62e-25 | 31 |
mucosa | 2.79e-15 | 15 |
intestinal mucosa | 4.81e-13 | 13 |
wall of intestine | 4.81e-13 | 13 |
gastrointestinal system mucosa | 4.81e-13 | 13 |
endoderm-derived structure | 1.87e-12 | 118 |
endoderm | 1.87e-12 | 118 |
presumptive endoderm | 1.87e-12 | 118 |
digestive system | 1.32e-11 | 116 |
digestive tract | 1.32e-11 | 116 |
primitive gut | 1.32e-11 | 116 |
organ component layer | 3.17e-11 | 24 |
subdivision of digestive tract | 2.63e-10 | 114 |
epithelium of mucosa | 2.37e-09 | 9 |
gastrointestinal system epithelium | 2.37e-09 | 9 |
intestinal epithelium | 2.37e-09 | 9 |
simple columnar epithelium | 1.88e-08 | 11 |