FFCP PHASE1:Mm9::chr6:115625889..115625905,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=110157|HGNC=|MCL_coexpression_id=6|UniProt=Q99N57|association_with_transcript=-13bp_to_uc009dix.1_5end|description=CAGE_peak_4_at_Raf1_5end|id=chr6:115625889..115625905,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!8.57e-10!47|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.45e-09,47;UBERON:0002204,3.90e-08,32;UBERON:0000383,1.13e-07,10;UBERON:0005256,1.14e-07,45|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0,0,0.503637815735669,1.16806320297763,0,0,0.234064526321993,0,0,0,0,0.666219523631325,0.809901069559304,0,0.473193248037357,0.411343300817216,0,0.595303031057488,0.297872853602656,0.261199789138935,0,0.45881856213434,0,0.430761996159075,0.215471232685889,0.190023419456374,0.504060259519861,0.886922042621219,0,0,0,0,0.498703936075477,0.204169356262369,33.0639988282157,25.7840663692854,16.2292360631877,81.764176836311,45.7640474922159,33.5002143591496,1.6366586336825,2.53442328048786,0.183546752161682,1.56478268869608,0.436050312760893,1.5378032791413,0.388859798148567,0.279972843250725,0,0.503347818173209,0,0,0.257259436035947,0.85960031981627,1.54701627683233,0,0,0,0,0.889294796111139,2.6996991518442,1.97773272513395,1.4209602298922,0.898800331555214,0.384218305321555,0.207379224616955,0.270011876663381,0,0.571301968807607,0,0.244981598429908,0.479227355091182,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.274462930807229,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0,0.869593466105033,1.72084775396277,7.47968467078526,1.07940638327563,0.649776417447669,0.896053774194671,1.26399978118577,2.21559419351475,2.07828803682295,0.35333957451034,0,2.56652954828636,0,0,0,0,0,0.68510327831436,0.517875767294343,1.1875371125186,0.173485326766136,0.304465478312141,0.691846491768175,0,0.117588707135705,0.502666365318702,1.97755974187499,0.578397427679647,0,0,0.883366073841574,2.90925151881133,0,0.585561594023094,0.209446706813455,0,0.239630249011841,0.599902730993408,0.381210681219194,0.299581278809645,0,0.502617408451458,0,0.255715457330331,0.41557608911912,0.324482526135515,0.203678727700633,1.11966273549084,0.252722758433675,0.420883711772948,0.260240885925407,0,0.360124259610698,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0.776110112217047,0.215567992932842,0.189106080167819,0,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,1.40442637462647,0.772043721344145,1.42081749697796,0,0.469052119962192,0.540186184383045,1.42046841351126,0.196764231747404,2.00547246753592,0.697601834251224,1.3413670069981,0.817357396570186,0.987359099480883,2.79084688934462,1.37816976227955,2.48539978623065,1.97595103761946,1.61047702512446,0.210289948564127,0.205809224758569,0.330418782983798,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.494096864172033,0.754005626400808,1.1937388322469,0.58489226135736,0,1.29682829924817,0.995706366271836,0,0.114248512609729,0,0,0,0.350679099451593,0.126473074248515,0,0,0,0.889357881261447,0.500535317148282,0,0,1.42002084971952,1.20588579876208,0.50925170356284,0.287696137450811,0.486405680325106,0.549122826376163,2.87536413054709,4.83783231969054,1.5601883655728,0.505157755894224,0.717589654087649,1.92977408545347,0.923765950833023,0.37898282354097,0.162964976442026,0.339490171550376,0,0.335012514883631,2.14239276797412,1.36593553500459,1.26108115284953,0.664394068946325,0.478364305972461,0.81931657357869,1.03610989119537,1.3018415272336,3.01582567878545,2.17562273527484,0.983528546038072,0,0.160550589987792,0.234423373184406,0.491804836130026,2.52470927204373,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,0.642642632843614,0.99358059645788,0.35613120733451,0.162886959353576,0.659880491890142,0,0,0,0.377210159511796,0,0,0.516856586336442,0,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0.63549621259146,0,0.16488625294148,0.484393280087717,1.02531972377865,0.954978752025092,0.656563598980245,1.1659233465194,0.18542530201051,0.341741761595705,0.82554747185289,1.66675074632741,0,0.27338845544205,0.457556346413045,0,0.559805809294632,0.276399947608848,0.954670618015114,0.158167996790568,0.813277868507395,0.324016022465404,0.627264888043406,0.655087691238533,1.48350781023303,1.98368293740806,2.09404753587224,0.648074866458964,0,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0.821500670520278,0,0.104859344425711,0,0,0,0,0.308132871494482,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,1.13365191807606,0,0,0,1.73870634628971,0.750729901804728,0.183151624267265,1.2862102744744,0,0,0.920650473014354,0.572895513439397,0.171853182343688,0,0,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0.419226325255965,0.183843508450014,0,0,0,0,0.50695859978048,0.754505365544305,0.187283014939765,0.704276676453562,0.574354689556133,0.476293691283074,0.347652977834566,0.964546102318525,0.412085900803307,0.441596760403192,0.685738504770831,0.887379030796687,0.476872379894642,0.290692833264657,0.564656282491984,0.507687647350059,0.548783918618318,0,0.543216455383447,0,0.593175090620871,0.394017929502254,0.818462086339379,0.619747364743864,0.578719832943424,0.499621155875892,0.701794825336225,1.07435527024149,0.956441660344217,0.661774257358546,0.695603506861264|short_description=p4@Raf1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:110157 | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99N57 | |||
|association_with_transcript=-13bp_to_uc009dix.1_5end | |||
|cluster_id=chr6:115625889..115625905,- | |||
|description=CAGE_peak_4_at_Raf1_5end | |||
|id=chr6:115625889..115625905,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!8.57e-10!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,5.45e-09,47;UBERON:0002204,3.90e-08,32;UBERON:0000383,1.13e-07,10;UBERON:0005256,1.14e-07,45 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0,0,0.503637815735669,1.16806320297763,0,0,0.234064526321993,0,0,0,0,0.666219523631325,0.809901069559304,0,0.473193248037357,0.411343300817216,0,0.595303031057488,0.297872853602656,0.261199789138935,0,0.45881856213434,0,0.430761996159075,0.215471232685889,0.190023419456374,0.504060259519861,0.886922042621219,0,0,0,0,0.498703936075477,0.204169356262369,33.0639988282157,25.7840663692854,16.2292360631877,81.764176836311,45.7640474922159,33.5002143591496,1.6366586336825,2.53442328048786,0.183546752161682,1.56478268869608,0.436050312760893,1.5378032791413,0.388859798148567,0.279972843250725,0,0.503347818173209,0,0,0.257259436035947,0.85960031981627,1.54701627683233,0,0,0,0,0.889294796111139,2.6996991518442,1.97773272513395,1.4209602298922,0.898800331555214,0.384218305321555,0.207379224616955,0.270011876663381,0,0.571301968807607,0,0.244981598429908,0.479227355091182,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.274462930807229,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0,0.869593466105033,1.72084775396277,7.47968467078526,1.07940638327563,0.649776417447669,0.896053774194671,1.26399978118577,2.21559419351475,2.07828803682295,0.35333957451034,0,2.56652954828636,0,0,0,0,0,0.68510327831436,0.517875767294343,1.1875371125186,0.173485326766136,0.304465478312141,0.691846491768175,0,0.117588707135705,0.502666365318702,1.97755974187499,0.578397427679647,0,0,0.883366073841574,2.90925151881133,0,0.585561594023094,0.209446706813455,0,0.239630249011841,0.599902730993408,0.381210681219194,0.299581278809645,0,0.502617408451458,0,0.255715457330331,0.41557608911912,0.324482526135515,0.203678727700633,1.11966273549084,0.252722758433675,0.420883711772948,0.260240885925407,0,0.360124259610698,0.30140963567143,0.0680364991513279,0.12811372028485,0.0937017245597288,0.776110112217047,0.215567992932842,0.189106080167819,0,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,1.40442637462647,0.772043721344145,1.42081749697796,0,0.469052119962192,0.540186184383045,1.42046841351126,0.196764231747404,2.00547246753592,0.697601834251224,1.3413670069981,0.817357396570186,0.987359099480883,2.79084688934462,1.37816976227955,2.48539978623065,1.97595103761946,1.61047702512446,0.210289948564127,0.205809224758569,0.330418782983798,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0.201683524623343,0.22237804384487,0.380451252225118,0.474529061544512,0.494096864172033,0.754005626400808,1.1937388322469,0.58489226135736,0,1.29682829924817,0.995706366271836,0,0.114248512609729,0,0,0,0.350679099451593,0.126473074248515,0,0,0,0.889357881261447,0.500535317148282,0,0,1.42002084971952,1.20588579876208,0.50925170356284,0.287696137450811,0.486405680325106,0.549122826376163,2.87536413054709,4.83783231969054,1.5601883655728,0.505157755894224,0.717589654087649,1.92977408545347,0.923765950833023,0.37898282354097,0.162964976442026,0.339490171550376,0,0.335012514883631,2.14239276797412,1.36593553500459,1.26108115284953,0.664394068946325,0.478364305972461,0.81931657357869,1.03610989119537,1.3018415272336,3.01582567878545,2.17562273527484,0.983528546038072,0,0.160550589987792,0.234423373184406,0.491804836130026,2.52470927204373,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,0.642642632843614,0.99358059645788,0.35613120733451,0.162886959353576,0.659880491890142,0,0,0,0.377210159511796,0,0,0.516856586336442,0,0.712994756769443,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0.63549621259146,0,0.16488625294148,0.484393280087717,1.02531972377865,0.954978752025092,0.656563598980245,1.1659233465194,0.18542530201051,0.341741761595705,0.82554747185289,1.66675074632741,0,0.27338845544205,0.457556346413045,0,0.559805809294632,0.276399947608848,0.954670618015114,0.158167996790568,0.813277868507395,0.324016022465404,0.627264888043406,0.655087691238533,1.48350781023303,1.98368293740806,2.09404753587224,0.648074866458964,0,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0.821500670520278,0,0.104859344425711,0,0,0,0,0.308132871494482,0,0.179026695667481,0,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.100826185136841,0,0,0,1.13365191807606,0,0,0,1.73870634628971,0.750729901804728,0.183151624267265,1.2862102744744,0,0,0.920650473014354,0.572895513439397,0.171853182343688,0,0,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0.419226325255965,0.183843508450014,0,0,0,0,0.50695859978048,0.754505365544305,0.187283014939765,0.704276676453562,0.574354689556133,0.476293691283074,0.347652977834566,0.964546102318525,0.412085900803307,0.441596760403192,0.685738504770831,0.887379030796687,0.476872379894642,0.290692833264657,0.564656282491984,0.507687647350059,0.548783918618318,0,0.543216455383447,0,0.593175090620871,0.394017929502254,0.818462086339379,0.619747364743864,0.578719832943424,0.499621155875892,0.701794825336225,1.07435527024149,0.956441660344217,0.661774257358546,0.695603506861264 | |||
|short_description=p4@Raf1 | |||
}} |
Revision as of 22:50, 4 August 2015
Short description: | p4@Raf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Raf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | -13bp_to_uc009dix.1_5end |
EntrezGene: | 110157 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 5.45e-09 | 47 |
musculoskeletal system | 3.90e-08 | 32 |
musculature of body | 1.13e-07 | 10 |
trunk mesenchyme | 1.14e-07 | 45 |