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FFCP PHASE1:Mm9::chr4:135803847..135803926,+: Difference between revisions

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{{FFCP|EntrezGene=21401|HGNC=|MCL_coexpression_id=3436|UniProt=P23881,A2AW45|association_with_transcript=0bp_to_ENSMUST00000102533,ENSMUST00000143942,NM_011542,uc008vhv.2_5end|description=CAGE_peak_1_at_Tcea3_5end|id=chr4:135803847..135803926,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!6.71e-14!47;UBERON:0000466!6.55e-09!79;UBERON:0009854!8.22e-09!23;UBERON:0009856!8.22e-09!23;UBERON:0001007!1.46e-08!128;UBERON:0001555!1.46e-08!128;UBERON:0007026!1.46e-08!128;UBERON:0004921!2.27e-08!126;UBERON:0004185!2.27e-08!126;UBERON:0002107!2.38e-08!22;UBERON:0007499!2.38e-08!22;UBERON:0006925!2.38e-08!22;UBERON:0009497!2.38e-08!22;UBERON:0000015!2.38e-08!22;UBERON:0002423!2.38e-08!22;UBERON:0006235!2.38e-08!22;UBERON:0008835!2.38e-08!22;UBERON:0003894!2.38e-08!22;UBERON:0004161!2.38e-08!22;UBERON:0008836!2.38e-08!22;UBERON:0004119!3.51e-08!130;UBERON:0000925!3.51e-08!130;UBERON:0006595!3.51e-08!130;UBERON:0000160!1.23e-07!43;UBERON:0002365!1.57e-07!25;UBERON:0002330!1.57e-07!25;UBERON:0001048!3.15e-07!147;UBERON:0005409!4.87e-07!59;UBERON:0000468!5.22e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0003914,4.69e-14,47;UBERON:0009854,6.66e-09,23;UBERON:0009856,6.66e-09,23;UBERON:0002107,1.96e-08,22;UBERON:0007499,1.96e-08,22;UBERON:0006925,1.96e-08,22;UBERON:0009497,1.96e-08,22;UBERON:0000015,1.96e-08,22;UBERON:0002423,1.96e-08,22;UBERON:0006235,1.96e-08,22;UBERON:0008835,1.96e-08,22;UBERON:0003894,1.96e-08,22;UBERON:0004161,1.96e-08,22;UBERON:0008836,1.96e-08,22;UBERON:0002365,1.32e-07,25;UBERON:0002330,1.32e-07,25;UBERON:0005177,1.61e-07,79|phase1_expression=28.3463459375485,4.53668029931169,2.72999543633722,48.6967380203996,43.0770327753859,12.5909453933917,16.8201101228778,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0,0,11.4808441703944,0.0992909512008853,0,19.5190755807956,18.5821517664408,5.16808767703518,8.18447792702242,8.40337807474967,73.7290867490731,58.218959974544,6.87364583031445,0,0,0,36.6841557084119,45.5482928282269,41.8547180337857,0,0,0,0,0,0,17.6255545165808,16.4230628575614,11.0128051297009,7.82391344348039,1.30815093828268,8.12838876117546,6.02732687130279,7.13930750289349,2.87505128729943,0,0,0,3.34437266846731,11.4613375975503,4.64104883049698,0.202316460859598,0.528990979272033,0,8.4711133017283,3.55717918444456,0.449949858640699,0,0,9.88680364710736,25.3584081512226,0.207379224616955,0.405017814995072,0,1.99955689082663,0.883474163806454,0,0.0958454710182364,0,0,0.127687338085188,0.307213066512487,0.263772575460388,0.548925861614458,0,0.837548997004143,1.68828783009504,0.916789486660861,0.589257170947335,1.28134512719193,0.559198337475902,0,0.226714680320357,9.85539261585705,100.669593606822,25.1589393471868,52.8909127805061,96.8166861997027,104.838291580777,85.2497630199734,9.03280709663706,7.53379413348319,9.18682893726885,16.1969932743183,11.5493829672886,43.3168907501298,28.4426681261332,4.11332977921307,7.85415582972806,6.0662933401774,41.905483856895,1.8125651855302,2.52351636410202,5.72501578328248,7.61163695780353,10.1470818792666,3.3158980921577,8.34879820663504,3.14166478324189,28.9218112249217,10.7003524120735,57.4996858767418,98.6777784679196,109.537393156355,82.913668286123,57.7814459776179,2.92780797011547,1.04723353406728,48.792297544841,0,0,0,1.19832511523858,0.457500602818626,0,0.695297280769106,0.255715457330331,1.24672826735736,0.324482526135515,22.9138568663212,38.814974830349,27.2940579108369,24.411255282831,0.650602214813519,3.21862946206862,6.48223667299257,15.9747106905858,8.98081788797528,10.3772113430728,12.5560310910037,19.1440494346872,3.23351989399263,1.70195472151037,4.22282697993477,9.64461222681329,13.6243152120543,25.4224081561182,25.311202778177,11.7430217422911,0,0,0,36.2470101937128,34.9443829371833,42.8547706277215,42.6140524053378,54.3069279622835,54.9190921879067,60.6913595798565,53.6546802799238,67.6071332305911,77.5076893092493,85.8595837133668,130.763989797465,132.603388594776,98.3584516503907,117.967442090367,2.10289948564127,2.57261530948211,36.015647345234,4.49565963328025,5.97207101498655,9.0572302025571,13.788818361464,14.117846723634,15.5664630691409,17.3105319762429,35.1151505542939,23.0578536613615,28.903549012031,35.0163390792425,38.6028892495858,38.6492345721315,44.524438274187,51.9758723193898,3.41402221715547,6.28366819353509,0,6.72049381889537,8.33995694820791,7.08371780892217,24.6622494784603,69.9672101423314,76.3013817309081,76.8764331232817,132.810776935043,8.00856507437251,12.9728936774714,13.0420025183215,32.0518991793835,34.0059795250908,55.2538098365681,50.3468240538919,18.6455510791291,135.084215288536,119.327611417704,153.694211387092,180.357775060216,107.093444249575,102.077128293968,156.311700921731,36.9506380333209,7.57965647081939,7.49638891633319,10.1847051465113,13.6120344007331,15.7455881995307,23.5663204477154,18.3425628986331,30.4235828124949,21.0391455166336,31.253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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:21401
|HGNC=
|MCL_coexpression_id=3436
|TSSclassifier=NA
|UniProt=uniprot:P23881,uniprot:A2AW45
|association_with_transcript=0bp_to_ENSMUST00000102533,ENSMUST00000143942,NM_011542,uc008vhv.2_5end
|cluster_id=chr4:135803847..135803926,+
|description=CAGE_peak_1_at_Tcea3_5end
|id=chr4:135803847..135803926,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!6.71e-14!47;UBERON:0000466!6.55e-09!79;UBERON:0009854!8.22e-09!23;UBERON:0009856!8.22e-09!23;UBERON:0001007!1.46e-08!128;UBERON:0001555!1.46e-08!128;UBERON:0007026!1.46e-08!128;UBERON:0004921!2.27e-08!126;UBERON:0004185!2.27e-08!126;UBERON:0002107!2.38e-08!22;UBERON:0007499!2.38e-08!22;UBERON:0006925!2.38e-08!22;UBERON:0009497!2.38e-08!22;UBERON:0000015!2.38e-08!22;UBERON:0002423!2.38e-08!22;UBERON:0006235!2.38e-08!22;UBERON:0008835!2.38e-08!22;UBERON:0003894!2.38e-08!22;UBERON:0004161!2.38e-08!22;UBERON:0008836!2.38e-08!22;UBERON:0004119!3.51e-08!130;UBERON:0000925!3.51e-08!130;UBERON:0006595!3.51e-08!130;UBERON:0000160!1.23e-07!43;UBERON:0002365!1.57e-07!25;UBERON:0002330!1.57e-07!25;UBERON:0001048!3.15e-07!147;UBERON:0005409!4.87e-07!59;UBERON:0000468!5.22e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0003914,4.69e-14,47;UBERON:0009854,6.66e-09,23;UBERON:0009856,6.66e-09,23;UBERON:0002107,1.96e-08,22;UBERON:0007499,1.96e-08,22;UBERON:0006925,1.96e-08,22;UBERON:0009497,1.96e-08,22;UBERON:0000015,1.96e-08,22;UBERON:0002423,1.96e-08,22;UBERON:0006235,1.96e-08,22;UBERON:0008835,1.96e-08,22;UBERON:0003894,1.96e-08,22;UBERON:0004161,1.96e-08,22;UBERON:0008836,1.96e-08,22;UBERON:0002365,1.32e-07,25;UBERON:0002330,1.32e-07,25;UBERON:0005177,1.61e-07,79
|phase1_expression=28.3463459375485,4.53668029931169,2.72999543633722,48.6967380203996,43.0770327753859,12.5909453933917,16.8201101228778,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0.157731082679119,0,0,11.4808441703944,0.0992909512008853,0,19.5190755807956,18.5821517664408,5.16808767703518,8.18447792702242,8.40337807474967,73.7290867490731,58.218959974544,6.87364583031445,0,0,0,36.6841557084119,45.5482928282269,41.8547180337857,0,0,0,0,0,0,17.6255545165808,16.4230628575614,11.0128051297009,7.82391344348039,1.30815093828268,8.12838876117546,6.02732687130279,7.13930750289349,2.87505128729943,0,0,0,3.34437266846731,11.4613375975503,4.64104883049698,0.202316460859598,0.528990979272033,0,8.4711133017283,3.55717918444456,0.449949858640699,0,0,9.88680364710736,25.3584081512226,0.207379224616955,0.405017814995072,0,1.99955689082663,0.883474163806454,0,0.0958454710182364,0,0,0.127687338085188,0.307213066512487,0.263772575460388,0.548925861614458,0,0.837548997004143,1.68828783009504,0.916789486660861,0.589257170947335,1.28134512719193,0.559198337475902,0,0.226714680320357,9.85539261585705,100.669593606822,25.1589393471868,52.8909127805061,96.8166861997027,104.838291580777,85.2497630199734,9.03280709663706,7.53379413348319,9.18682893726885,16.1969932743183,11.5493829672886,43.3168907501298,28.4426681261332,4.11332977921307,7.85415582972806,6.0662933401774,41.905483856895,1.8125651855302,2.52351636410202,5.72501578328248,7.61163695780353,10.1470818792666,3.3158980921577,8.34879820663504,3.14166478324189,28.9218112249217,10.7003524120735,57.4996858767418,98.6777784679196,109.537393156355,82.913668286123,57.7814459776179,2.92780797011547,1.04723353406728,48.792297544841,0,0,0,1.19832511523858,0.457500602818626,0,0.695297280769106,0.255715457330331,1.24672826735736,0.324482526135515,22.9138568663212,38.814974830349,27.2940579108369,24.411255282831,0.650602214813519,3.21862946206862,6.48223667299257,15.9747106905858,8.98081788797528,10.3772113430728,12.5560310910037,19.1440494346872,3.23351989399263,1.70195472151037,4.22282697993477,9.64461222681329,13.6243152120543,25.4224081561182,25.311202778177,11.7430217422911,0,0,0,36.2470101937128,34.9443829371833,42.8547706277215,42.6140524053378,54.3069279622835,54.9190921879067,60.6913595798565,53.6546802799238,67.6071332305911,77.5076893092493,85.8595837133668,130.763989797465,132.603388594776,98.3584516503907,117.967442090367,2.10289948564127,2.57261530948211,36.015647345234,4.49565963328025,5.97207101498655,9.0572302025571,13.788818361464,14.117846723634,15.5664630691409,17.3105319762429,35.1151505542939,23.0578536613615,28.903549012031,35.0163390792425,38.6028892495858,38.6492345721315,44.524438274187,51.9758723193898,3.41402221715547,6.28366819353509,0,6.72049381889537,8.33995694820791,7.08371780892217,24.6622494784603,69.9672101423314,76.3013817309081,76.8764331232817,132.810776935043,8.00856507437251,12.9728936774714,13.0420025183215,32.0518991793835,34.0059795250908,55.2538098365681,50.3468240538919,18.6455510791291,135.084215288536,119.327611417704,153.694211387092,180.357775060216,107.093444249575,102.077128293968,156.311700921731,36.9506380333209,7.57965647081939,7.49638891633319,10.1847051465113,13.6120344007331,15.7455881995307,23.5663204477154,18.3425628986331,30.4235828124949,21.0391455166336,31.2531346568675,32.4449363137161,37.6453260467652,38.7659476998451,0,0,1.96705709207614,3.31124095565679,1.44495530989013,1.28932855251423,7.86887737808042,377.444036170538,0.315508219416257,1.56175497718655,0,0,0.668396022247182,0.283076530788832,0,0.292255857911312,0.790575555893047,1.92792789853084,6.95506417520516,28.1343653794263,22.8041743095006,13.0326397148303,127.435332806364,16.5090832585387,20.5580018736031,26.4047111658257,25.3959627877465,11.6825356218692,10.8539883130653,51.6217895858058,57.3960779199401,55.3064326387678,104.364422489249,141.295694250016,2.04263763452273,3.6012218806262,5.95049945400671,6.00143698088458,6.0295679438373,12.3074484145429,9.87294123612726,8.52501857520878,2.58138878870081,2.1183207086382,7.93902232997863,80.2996051825008,13.4015474157602,11.7610203609904,10.2660215842697,10.833299383174,46.6369338607761,4.63563255026274,0.512612642393558,7.42992724667601,2.22233432843654,1.50694765603753,0.410082683163076,1.37266903923914,0,0,0,63.0082607889975,6.64305586520384,10.3692928234693,15.8767851008048,19.0270349373167,18.5608179184251,37.8968813341346,61.9900917940019,46.5925576731573,48.7352299577141,41.0083946637371,2.25477175473676,16.4468200648377,17.5385999884523,12.444876054019,12.3993430538622,11.9958849098453,12.9092962510329,14.9735042570543,11.1150905091254,4.34851417486811,37.7319308197804,2.52808896502543,1.62180172232131,1.64337531463724,0.909445760844565,2.32734704367726,1.78813219303138,1.20195449519969,1.03382669022204,1.71642964911851,0.990688486514998,0.504130925684203,0.877120926657772,0.769694733122636,0.701261413089414,192.494095689314,4.66170502085536,5.83140067961592,9.56942313275247,55.2522238932065,5.2551093126331,3.84618410961257,4.71610433973945,3.00943262421218,0,0,0,0.515559547031063,0.685082519770642,0,0.675022500231806,0.900642406448441,0.906284817968409,0.51776031175182,3.1136204275253,2.39414924040619,5.46347538413229,20.664070950805,24.9439663527299,41.7324764181532,31.5590353478294,44.5035723636012,35.3011130550997,41.4423427292628,35.2336226847433,37.7252682772152,36.9883954506036,37.0065380900144,38.5966351381721,30.9590899333998,40.09597677692,46.8769405726803,27.1976694530182,35.3277408322554,34.2869252385415,34.0753547825928,39.5804075312553,38.6621468241994,38.1142990682089,41.3765432590298,42.8051456522288,32.3575745068547,40.7412341537585,43.7690971893036,42.7086065247027,43.3419722452479,36.0123317989327,38.4243366141196,33.1799370887563,24.9810577937946,32.0486303570209,26.2142685938924,46.4830646927289,82.2805993315793,91.3559272344461
|short_description=p1@Tcea3
}}

Revision as of 23:36, 4 August 2015

Short description:p1@Tcea3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tcea3_5end
Coexpression cluster:MCL_coexpression_mm9:3436
Association with transcript: 0bp_to_ENSMUST00000102533, ENSMUST00000143942, NM_011542, uc008vhv.2_5end
EntrezGene:21401
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tcea3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G728.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I54.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.73
CD326+ enterocyte, pool1.CNhs13542.11848-124I348.70
CD326+ enterocyte, pool2.CNhs13197.11849-124I443.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I712.59
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I816.82
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A311.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D218.58
GP2+ M cell, pool1.CNhs13228.11845-124H95.17
GP2+ M cell, pool2.CNhs13231.11846-124I18.18
GP2+ M cell, pool3.CNhs13240.11847-124I28.40
Ileum epithelium, pool1.CNhs13199.10252-104B973.73
Ileum epithelium, pool2.CNhs13232.10253-104C158.22
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F536.68
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F645.55
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F741.85
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D817.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D916.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.01
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B88.13
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C36.03
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.46
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C68.47
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C89.89
Mouse Microglia, donor2.CNhs12634.11736-123E825.36
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G39.86
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F7100.67
Mouse hepatocyte, donor1.CNhs13078.11714-123C425.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C852.89
Mouse hepatocyte, donor6.CNhs13090.11822-124F496.82
Mouse hepatocyte, donor8.CNhs13091.11824-124F6104.84
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A785.25
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.03
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I89.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.20
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H111.55
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I843.32
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G36.07
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B641.91
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D72.52
adrenal gland, embryo E14.CNhs11038.406-44C55.73
adrenal gland, embryo E16.CNhs11004.1254-43D67.61
adrenal gland, embryo E17.CNhs11043.1263-45I110.15
adrenal gland, embryo E18.CNhs11026.1262-18F53.32
adrenal gland, neonate N00.CNhs11191.1311-23C18.35
adrenal gland, neonate N25.CNhs11223.1377-27I33.14
amnion, adult pregnant day17.5.CNhs10488.583-22A828.92
aorta, adult.CNhs10498.46-23H110.70
bone (os femoris), adult.CNhs10483.56-12G257.50
bone (os femoris), neonate N02.CNhs11227.1985-43F598.68
bone (os femoris), neonate N16.CNhs11225.1525-43A6109.54
bone (os femoris), neonate N20.CNhs11195.1350-25C382.91
cecum, adult.CNhs10467.37-13H457.78
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H748.79
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B122.91
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A238.81
epididymis, adult.CNhs10490.58-23B227.29
eyeball, adult.CNhs10484.31-12G424.41
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C96.48
eyeball, embryo E17.CNhs11023.1261-18D415.97
eyeball, neonate N00.CNhs11207.633-15C68.98
eyeball, neonate N01.CNhs11140.1532-43E710.38
eyeball, neonate N02.CNhs11205.1551-44G812.56
eyeball, neonate N16.CNhs11188.777-19A219.14
forelimb, embryo E11.CNhs10596.335-25E23.23
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E24.22
forelimb, embryo E14.CNhs10577.413-26A89.64
forelimb, embryo E15.CNhs11007.437-20E713.62
forelimb, embryo E17.CNhs10598.1517-43C425.42
forelimb, embryo E18.CNhs11008.1520-43B525.31
gonad, embryo E13.CNhs11044.1564-45I611.74
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E936.25
heart, embryo E12.CNhs11015.353-12F534.94
heart, embryo E13.CNhs11013.376-3I942.85
heart, embryo E14.CNhs10597.403-26D442.61
heart, embryo E15.CNhs11017.431-16C854.31
heart, embryo E16.CNhs11021.457-17C654.92
heart, embryo E17.CNhs11025.479-18E560.69
heart, embryo E18.CNhs11030.1283-20G353.65
heart, neonate N00.CNhs11213.639-21E367.61
heart, neonate N03.CNhs11221.1349-25I277.51
heart, neonate N10.CNhs11118.749-24G185.86
heart, neonate N16.CNhs11209.782-15G1130.76
heart, neonate N20.CNhs11127.821-26I6132.60
heart, neonate N25.CNhs11196.1351-25D398.36
heart, neonate N30.CNhs11202.1390-42D2117.97
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I336.02
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I55.97
intestine, embryo E13.CNhs11010.381-16D59.06
intestine, embryo E15.CNhs10602.976-16D813.79
intestine, embryo E16.CNhs10585.463-22H414.12
intestine, embryo E17.CNhs10582.482-18D315.57
intestine, embryo E18.CNhs10526.1289-20F717.31
intestine, neonate N00.CNhs11126.644-26D135.12
intestine, neonate N01.CNhs11192.1322-23E923.06
intestine, neonate N06.CNhs11102.688-20B828.90
intestine, neonate N07.CNhs11095.720-20F235.02
intestine, neonate N10.CNhs11098.755-23A538.60
intestine, neonate N20.CNhs11187.827-18D138.65
intestine, neonate N25.CNhs11121.1352-25E344.52
intestine, neonate N30.CNhs11131.1384-42G151.98
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F86.28
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I26.72
kidney, embryo E18.CNhs11001.1288-20C78.34
kidney, neonate N00.CNhs11214.646-21G77.08
kidney, neonate N10.CNhs11206.758-6D524.66
kidney, neonate N20.CNhs11113.832-19I169.97
kidney, neonate N25.CNhs11122.1353-25F376.30
kidney, neonate N30.CNhs11203.1385-42H176.88
liver, adult pregnant day01.CNhs10466.508-5B2132.81
liver, embryo E12.CNhs10601.355-15F88.01
liver, embryo E13.CNhs10524.378-3H612.97
liver, embryo E14.CNhs10594.409-16E113.04
liver, embryo E15.CNhs10520.433-16D732.05
liver, embryo E16.CNhs10523.462-17F534.01
liver, embryo E17.CNhs10510.481-18A355.25
liver, embryo E18.CNhs10579.499-43G450.35
liver, neonate N00.CNhs11117.641-24F418.65
liver, neonate N03.CNhs11123.1345-25G2135.08
liver, neonate N06.CNhs11101.684-20A8119.33
liver, neonate N07.CNhs11103.716-20H2153.69
liver, neonate N10.CNhs11115.751-24B9180.36
liver, neonate N20.CNhs11220.823-25A3107.09
liver, neonate N25.CNhs11198.1368-26H1102.08
liver, neonate N30.CNhs11106.1382-42D1156.31
lung, adult.CNhs10474.28-22B136.95
lung, embryo E12.CNhs10522.354-16G27.58
lung, embryo E14.CNhs10604.404-26F87.50
lung, embryo E15.CNhs11020.432-17C510.18
lung, embryo E16.CNhs10998.458-17B613.61
lung, embryo E17.CNhs10605.480-44A615.75
lung, embryo E18.CNhs10583.1287-20I623.57
lung, neonate N00.CNhs11224.640-42C618.34
lung, neonate N06.CNhs11212.683-20E530.42
lung, neonate N07.CNhs11111.715-19A321.04
lung, neonate N10.CNhs11219.750-23E631.25
lung, neonate N20.CNhs11109.822-18A432.44
lung, neonate N25.CNhs11119.1359-25C737.65
lung, neonate N30.CNhs11133.1394-42H238.77
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H23.31
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.87
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2377.44
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I76.96
ovary, embryo E18.CNhs11040.505-44H728.13
ovary, neonate N00.CNhs11217.1299-22I422.80
oviduct, adult pregnant day01.CNhs10500.988-6G613.03
pancreas, adult.CNhs10486.34-16E4127.44
pancreas, embryo E14.CNhs11012.405-44F416.51
pancreas, embryo E15.CNhs11042.1556-45F220.56
pancreas, embryo E16.CNhs11003.460-26E526.40
pancreas, embryo E17.CNhs10599.1558-45G325.40
pancreas, embryo E18.CNhs10580.1535-43I711.68
pancreas, neonate N00.CNhs11105.645-26G910.85
pancreas, neonate N01.CNhs11138.1531-43D751.62
pancreas, neonate N02.CNhs11139.1539-43D857.40
pancreas, neonate N16.CNhs11136.787-43B655.31
pancreas, neonate N25.CNhs11094.1555-45E2104.36
pancreas, neonate N30.CNhs11182.1548-44H5141.30
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E63.60
pituitary gland, embryo E13.CNhs11009.370-44C75.95
pituitary gland, embryo E14.CNhs11037.398-44A56.00
pituitary gland, embryo E15.CNhs10592.427-16B96.03
pituitary gland, embryo E16.CNhs11036.449-43F612.31
pituitary gland, embryo E17.CNhs11039.1265-44F59.87
pituitary gland, neonate N00.CNhs11190.1308-22E98.53
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G32.12
prostate, adult.CNhs10470.859-1F87.94
skin, adult.CNhs10492.30-1C380.30
skin, neonate N00.CNhs11124.650-25G413.40
skin, neonate N03.CNhs11215.662-22H311.76
skin, neonate N06.CNhs11097.693-20I510.27
skin, neonate N10.CNhs11108.762-6C410.83
small intestine, neonate N16.CNhs11114.790-21I146.64
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C17.43
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D11.51
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G31.37
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H663.01
stomach, embryo E12.CNhs10588.356-43E36.64
stomach, embryo E15.CNhs10603.1252-16G810.37
stomach, embryo E16.CNhs11022.459-17D415.88
stomach, embryo E17.CNhs11006.1035-18D519.03
stomach, embryo E18.CNhs10999.1286-20C618.56
stomach, neonate N03.CNhs11193.1340-24B837.90
stomach, neonate N07.CNhs11210.718-18A961.99
stomach, neonate N25.CNhs11104.1355-25E446.59
stomach, neonate N30.CNhs11134.1386-42I148.74
submandibular gland, adult.CNhs10469.59-29C141.01
testis, adult.CNhs10504.57-7G52.25
testis, embryo E13.CNhs11031.389-23F516.45
testis, embryo E15.CNhs11034.443-27C517.54
testis, embryo E16.CNhs11033.470-26G512.44
testis, embryo E17.CNhs11029.486-18I512.40
testis, embryo E18.CNhs11027.503-18G512.00
testis, neonate N00.CNhs11189.1300-22B712.91
testis, neonate N07.CNhs11222.726-26I414.97
testis, neonate N10.CNhs11204.763-44D911.12
testis, neonate N20.CNhs11110.839-18H34.35
testis, neonate N30.CNhs11130.1391-42E237.73
thymus, adult.CNhs10471.38-12B52.53
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I21.64
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F81.20
thymus, neonate N03.CNhs11137.2104-43C71.03
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B4192.49
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.83
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G59.57
urinary bladder, adult.CNhs10481.879-12E455.25
uterus, adult pregnant day19.CNhs10497.590-15F55.26
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D54.72
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C92.39
whole body, embryo E13.CNhs10512.372-23H25.46
whole body, embryo E14.5.CNhs10578.420-27D220.66
whole body, embryo E14.CNhs10519.395-14B124.94
whole body, embryo E16.CNhs10514.453-14F241.73
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G531.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G544.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G535.30
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G541.44
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G535.23
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G537.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G536.99
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G537.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G538.60
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G530.96
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G540.10
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G546.88
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G527.20
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G535.33
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G534.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G534.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G539.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G538.66
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G538.11
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G541.38
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G542.81
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G532.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G540.74
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G543.77
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G542.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G543.34
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G536.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G538.42
whole body, embryo E17.5.CNhs10513.490-9F933.18
whole body, embryo E17.CNhs10517.475-3I524.98
whole body, embryo E18.CNhs10516.493-3B332.05
whole body, neonate N00.CNhs10525.657-19C226.21
whole body, neonate N01.CNhs10576.659-23C646.48
whole body, neonate N06.CNhs10515.692-21D182.28
whole body, neonate N10.CNhs10518.761-6B491.36





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial tube4.69e-1447
digestive tract diverticulum6.66e-0923
sac6.66e-0923
liver1.96e-0822
epithelial sac1.96e-0822
digestive gland1.96e-0822
epithelium of foregut-midgut junction1.96e-0822
anatomical boundary1.96e-0822
hepatobiliary system1.96e-0822
foregut-midgut junction1.96e-0822
hepatic diverticulum1.96e-0822
liver primordium1.96e-0822
septum transversum1.96e-0822
liver bud1.96e-0822
exocrine gland1.32e-0725
exocrine system1.32e-0725
trunk region element1.61e-0779
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