FFCP PHASE1:Mm9::chr12:36719487..36719504,+: Difference between revisions
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{{FFCP|EntrezGene=23795|HGNC=|MCL_coexpression_id=1324|UniProt=O88312|association_with_transcript=0bp_to_ENSMUST00000020898,ENSMUST00000147861_5end|description=CAGE_peak_1_at_Agr2_5end|id=chr12:36719487..36719504,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,2.65e-07,9;CL:0002251,2.65e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.70e-25!59;UBERON:0000160!4.08e-22!43;UBERON:0001007!1.41e-17!128;UBERON:0001555!1.41e-17!128;UBERON:0007026!1.41e-17!128;UBERON:0004119!1.18e-16!130;UBERON:0000925!1.18e-16!130;UBERON:0006595!1.18e-16!130;UBERON:0004921!2.21e-16!126;UBERON:0004185!2.21e-16!126;UBERON:0000344!2.00e-10!15;UBERON:0001242!4.23e-09!13;UBERON:0000060!4.23e-09!13;UBERON:0001262!4.23e-09!13;UBERON:0004786!4.23e-09!13;UBERON:0002108!2.65e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.48e-23,47;UBERON:0000160,4.87e-21,31;UBERON:0000344,3.83e-12,15;UBERON:0001007,9.96e-12,116;UBERON:0001555,9.96e-12,116;UBERON:0007026,9.96e-12,116;UBERON:0004119,3.84e-11,118;UBERON:0000925,3.84e-11,118;UBERON:0006595,3.84e-11,118;UBERON:0004921,1.20e-10,114;UBERON:0001242,1.46e-10,13;UBERON:0001262,1.46e-10,13;UBERON:0004786,1.46e-10,13;UBERON:0000485,1.89e-07,11;UBERON:0003350,2.65e-07,9;UBERON:0004808,2.65e-07,9;UBERON:0001277,2.65e-07,9|phase1_expression=4.48416771893423,151.455326915483,107.83481973532,57.7706643596045,78.6406296015765,1218.80351408032,1418.49595369603,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99703463710028,0,0,541.094373887301,599.446451428515,288.26444598574,622.020322453704,648.783881617212,1800.47189934914,1110.69678185201,2260.09909510952,0,0,0,160.89035220146,310.526317529664,162.722976941108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0.869593466105033,0,0,0,0,0,83.5644299783924,0,0,0,7.74638808771743,0,0,0,12.5564803786504,5.82727690592727,7.07734223020697,153.463134342417,0.258937883647172,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0.485300549842228,0,0.484875253135222,1157.49283716454,0,0,592.915825139141,0,0,0,0,0,0,0,0,0,0.162241263067758,0.611036183101898,33.5898820647251,204.705434331277,7.36546495602659,0.130120442962704,0,0.180062129805349,1.20563854268572,0.408218994907967,0.384341160854549,0.843315521037559,2.58703370739016,0,0,0,0,0.834141747676794,0,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0,0,0,1.07986979021165,0.232533944750408,6.9751084363901,5.48797109125697,0,0,0,0,0,0,0,0,216.424302854388,440.045742928138,0.853153002140936,2.32236671860439,51.4181170675152,128.674088709693,211.703897740317,337.650486349793,519.60932239124,285.587987491435,229.469045634646,219.846901605472,245.459785682972,508.731785298289,997.477100171714,737.420134860922,0.189667900953082,0.685491075658373,3.38123207019241,2.44381593414377,0.969762435838129,0.561086559122548,0.442655759869801,0.295220295959204,0.31399745568275,0,0,0,1.17935397067922,0,0.405720242777006,0,1.52775511068852,0,0,0,0,1.11642284300551,0.936113019343682,1.26289438973556,0.717589654087649,0,3.51031061316549,0.568474235311454,0.162964976442026,1.86719594352707,0.704070744865506,1.67506257441816,12.8543566078447,12.8788207586147,2.67979744980525,3.10050565508285,8.45110273884682,6.882259218061,8.63424909329478,4.19482269886384,0,0,0.983528546038072,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.458630480617,0.178065603667255,1.30309567482861,26.2302495526331,6.63725691699814,0.728341908464944,3.02323556964751,46.5854546997068,28.9395855023157,32.5881256820563,32.8203932323641,9.45187696641514,15.6858846489277,86.9101084323494,25.3004660579997,16.5016869197099,0.680879211507576,0.36012218806262,1.16422815404479,1.50035924522115,1.59606210278046,1.24858172321449,1.31639216481697,0.913394847343798,0,0,1481.73030653129,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,2.46211349617592,350.94292730234,0,0.341741761595705,1.23832120777933,0.185194527369712,0,0.410082683163076,0,0,0,0,1355.63227758146,7.90839983952838,44.1203243665262,125.394200694111,223.515388439467,534.11483092315,524.487443090568,574.441517291085,618.005779024294,406.731786189646,8.69875038321696,0,0,0,0,0,0,0.117357238645754,0.39061315453185,0.209718688851422,0,0.288030006257865,0.632022241256357,0.608175645870493,0.821687657318618,2.46849563657811,8.95133478337407,9.13934231993819,0.721172697119813,0.147689527174577,1.71642964911851,0.457240839929999,0.302478555410522,0.877120926657772,0.288635524920988,0.467507608726276,160.751841983185,0,0,0,19.1257698091869,4.31669693537719,27.1064403915552,12.2189976075068,337.056453911764,0.564751842617067,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0.170733605754134,4.132814190161,1.46729213839588,4.04455718590031,18.4464784075341,18.9552252659783,16.0459604795908,14.9091354940641,15.2087579934144,13.3924702384114,16.4809053146993,17.2867911493147,16.7137214660835,16.6702791949076,14.2537720912172,16.3972837394149,18.5438655361488,14.2782952530365,19.2006781335833,17.7475806159337,15.9752247264705,18.6043413289381,17.2220166160055,17.0921507941187,17.7440133686589,15.7841826862706,18.8767718245748,11.7839877048125,12.8125819574108,15.4652037329635,16.7784727699573,14.7189999126668,20.0622875420387,2.24829520144151,24.7967504952133,24.9250422696026,7.46024495068489,3.75005412503176,2.08681052058379|short_description=p1@Agr2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:23795 | |||
|HGNC= | |||
|MCL_coexpression_id=1324 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O88312 | |||
|association_with_transcript=0bp_to_ENSMUST00000020898,ENSMUST00000147861_5end | |||
|cluster_id=chr12:36719487..36719504,+ | |||
|description=CAGE_peak_1_at_Agr2_5end | |||
|id=chr12:36719487..36719504,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.65e-07,9;CL:0002251,2.65e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.70e-25!59;UBERON:0000160!4.08e-22!43;UBERON:0001007!1.41e-17!128;UBERON:0001555!1.41e-17!128;UBERON:0007026!1.41e-17!128;UBERON:0004119!1.18e-16!130;UBERON:0000925!1.18e-16!130;UBERON:0006595!1.18e-16!130;UBERON:0004921!2.21e-16!126;UBERON:0004185!2.21e-16!126;UBERON:0000344!2.00e-10!15;UBERON:0001242!4.23e-09!13;UBERON:0000060!4.23e-09!13;UBERON:0001262!4.23e-09!13;UBERON:0004786!4.23e-09!13;UBERON:0002108!2.65e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.48e-23,47;UBERON:0000160,4.87e-21,31;UBERON:0000344,3.83e-12,15;UBERON:0001007,9.96e-12,116;UBERON:0001555,9.96e-12,116;UBERON:0007026,9.96e-12,116;UBERON:0004119,3.84e-11,118;UBERON:0000925,3.84e-11,118;UBERON:0006595,3.84e-11,118;UBERON:0004921,1.20e-10,114;UBERON:0001242,1.46e-10,13;UBERON:0001262,1.46e-10,13;UBERON:0004786,1.46e-10,13;UBERON:0000485,1.89e-07,11;UBERON:0003350,2.65e-07,9;UBERON:0004808,2.65e-07,9;UBERON:0001277,2.65e-07,9 | |||
|phase1_expression=4.48416771893423,151.455326915483,107.83481973532,57.7706643596045,78.6406296015765,1218.80351408032,1418.49595369603,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99703463710028,0,0,541.094373887301,599.446451428515,288.26444598574,622.020322453704,648.783881617212,1800.47189934914,1110.69678185201,2260.09909510952,0,0,0,160.89035220146,310.526317529664,162.722976941108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0,0.869593466105033,0,0,0,0,0,83.5644299783924,0,0,0,7.74638808771743,0,0,0,12.5564803786504,5.82727690592727,7.07734223020697,153.463134342417,0.258937883647172,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.117588707135705,0.251333182659351,0,0.144599356919912,0,0.485300549842228,0,0.484875253135222,1157.49283716454,0,0,592.915825139141,0,0,0,0,0,0,0,0,0,0.162241263067758,0.611036183101898,33.5898820647251,204.705434331277,7.36546495602659,0.130120442962704,0,0.180062129805349,1.20563854268572,0.408218994907967,0.384341160854549,0.843315521037559,2.58703370739016,0,0,0,0,0.834141747676794,0,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0,0,0,1.07986979021165,0.232533944750408,6.9751084363901,5.48797109125697,0,0,0,0,0,0,0,0,216.424302854388,440.045742928138,0.853153002140936,2.32236671860439,51.4181170675152,128.674088709693,211.703897740317,337.650486349793,519.60932239124,285.587987491435,229.469045634646,219.846901605472,245.459785682972,508.731785298289,997.477100171714,737.420134860922,0.189667900953082,0.685491075658373,3.38123207019241,2.44381593414377,0.969762435838129,0.561086559122548,0.442655759869801,0.295220295959204,0.31399745568275,0,0,0,1.17935397067922,0,0.405720242777006,0,1.52775511068852,0,0,0,0,1.11642284300551,0.936113019343682,1.26289438973556,0.717589654087649,0,3.51031061316549,0.568474235311454,0.162964976442026,1.86719594352707,0.704070744865506,1.67506257441816,12.8543566078447,12.8788207586147,2.67979744980525,3.10050565508285,8.45110273884682,6.882259218061,8.63424909329478,4.19482269886384,0,0,0.983528546038072,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.458630480617,0.178065603667255,1.30309567482861,26.2302495526331,6.63725691699814,0.728341908464944,3.02323556964751,46.5854546997068,28.9395855023157,32.5881256820563,32.8203932323641,9.45187696641514,15.6858846489277,86.9101084323494,25.3004660579997,16.5016869197099,0.680879211507576,0.36012218806262,1.16422815404479,1.50035924522115,1.59606210278046,1.24858172321449,1.31639216481697,0.913394847343798,0,0,1481.73030653129,0.16488625294148,0.161464426695906,0.0603129249281559,0.238744688006273,2.46211349617592,350.94292730234,0,0.341741761595705,1.23832120777933,0.185194527369712,0,0.410082683163076,0,0,0,0,1355.63227758146,7.90839983952838,44.1203243665262,125.394200694111,223.515388439467,534.11483092315,524.487443090568,574.441517291085,618.005779024294,406.731786189646,8.69875038321696,0,0,0,0,0,0,0.117357238645754,0.39061315453185,0.209718688851422,0,0.288030006257865,0.632022241256357,0.608175645870493,0.821687657318618,2.46849563657811,8.95133478337407,9.13934231993819,0.721172697119813,0.147689527174577,1.71642964911851,0.457240839929999,0.302478555410522,0.877120926657772,0.288635524920988,0.467507608726276,160.751841983185,0,0,0,19.1257698091869,4.31669693537719,27.1064403915552,12.2189976075068,337.056453911764,0.564751842617067,0,0,0,0.685082519770642,0,0,0,0,0,0,0,0.170733605754134,4.132814190161,1.46729213839588,4.04455718590031,18.4464784075341,18.9552252659783,16.0459604795908,14.9091354940641,15.2087579934144,13.3924702384114,16.4809053146993,17.2867911493147,16.7137214660835,16.6702791949076,14.2537720912172,16.3972837394149,18.5438655361488,14.2782952530365,19.2006781335833,17.7475806159337,15.9752247264705,18.6043413289381,17.2220166160055,17.0921507941187,17.7440133686589,15.7841826862706,18.8767718245748,11.7839877048125,12.8125819574108,15.4652037329635,16.7784727699573,14.7189999126668,20.0622875420387,2.24829520144151,24.7967504952133,24.9250422696026,7.46024495068489,3.75005412503176,2.08681052058379 | |||
|short_description=p1@Agr2 | |||
}} |
Revision as of 00:22, 5 August 2015
Short description: | p1@Agr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Agr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1324 |
Association with transcript: | 0bp_to_ENSMUST00000020898, ENSMUST00000147861_5end |
EntrezGene: | 23795 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.65e-07 | 9 |
epithelial cell of alimentary canal | 2.65e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 4.48e-23 | 47 |
intestine | 4.87e-21 | 31 |
mucosa | 3.83e-12 | 15 |
digestive system | 9.96e-12 | 116 |
digestive tract | 9.96e-12 | 116 |
primitive gut | 9.96e-12 | 116 |
endoderm-derived structure | 3.84e-11 | 118 |
endoderm | 3.84e-11 | 118 |
presumptive endoderm | 3.84e-11 | 118 |
subdivision of digestive tract | 1.20e-10 | 114 |
intestinal mucosa | 1.46e-10 | 13 |
wall of intestine | 1.46e-10 | 13 |
gastrointestinal system mucosa | 1.46e-10 | 13 |
simple columnar epithelium | 1.89e-07 | 11 |
epithelium of mucosa | 2.65e-07 | 9 |
gastrointestinal system epithelium | 2.65e-07 | 9 |
intestinal epithelium | 2.65e-07 | 9 |