FFCP PHASE1:Mm9::chr17:52741567..52741609,+: Difference between revisions
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{{FFCP|EntrezGene=211468|HGNC=|MCL_coexpression_id=248|UniProt=P59111|association_with_transcript=-478bp_to_NM_001031811,uc008czj.1_5end|description=CAGE_peak_2_at_Kcnh8_5end|id=chr17:52741567..52741609,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002613,2.51e-11,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000007!1.60e-08!8;UBERON:0003296!1.60e-08!8;UBERON:0010133!1.60e-08!8;UBERON:0001894!1.45e-07!10;UBERON:0006222!1.45e-07!10;UBERON:0001049!3.85e-07!52;UBERON:0005068!3.85e-07!52;UBERON:0006241!3.85e-07!52;UBERON:0007135!3.85e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.00e-49,8;UBERON:0003296,3.00e-49,8;UBERON:0010133,3.00e-49,8;UBERON:0001894,2.20e-39,10;UBERON:0006222,2.20e-39,10;UBERON:0002780,3.82e-16,39;UBERON:0001890,3.82e-16,39;UBERON:0006240,3.82e-16,39;UBERON:0003080,1.00e-15,40;UBERON:0002616,1.34e-13,46;UBERON:0000955,2.69e-13,47;UBERON:0006238,2.69e-13,47;UBERON:0003056,9.95e-13,49;UBERON:0001049,5.87e-12,52;UBERON:0005068,5.87e-12,52;UBERON:0006241,5.87e-12,52;UBERON:0007135,5.87e-12,52;UBERON:0000073,1.72e-11,54;UBERON:0001017,2.65e-10,73;UBERON:0001016,5.23e-10,75;UBERON:0002346,1.37e-09,64;UBERON:0003075,1.37e-09,64;UBERON:0007284,1.37e-09,64;UBERON:0010371,2.55e-08,73;UBERON:0004121,9.89e-08,95;UBERON:0000924,9.89e-08,95;UBERON:0006601,9.89e-08,95;UBERON:0000369,3.73e-07,5;UBERON:0002435,3.73e-07,5;UBERON:0000204,3.73e-07,5;UBERON:0010082,3.73e-07,5|phase1_expression=0.640595388419176,0.348975407639361,0,0,0,0.839396359559449,0.700837921786577,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0,0,0.430942465371778,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0.856952953211411,0.220868540951614,0.244981598429908,0.287536413054709,0,0,0.255374676170375,0,0.527545150920775,1.09785172322892,1.56274011167028,0,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0.376963056338593,0.173824320192276,0,0.20778804455956,0,0.203678727700633,0.746441823660558,2.27450482590307,0,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0.2562274405697,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0,0.898819408654221,0.216138049874694,0,0.379335801906163,0,0,0,0.387904974335251,0.140271639780637,0.69560190836683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0.728341908464944,0.604647113929502,0.565815239267694,0,0.614870295887855,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,24.5116516142727,0.18006109403131,1.16422815404479,6.00143698088458,15.6059405605201,11.0588666913284,9.3792941743209,2.74018454203139,0,0,0,0,0.161464426695906,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0.179026695667481,0,0.240390899039938,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.512200817262403,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.231768651889711,0.77163688185482,0,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0,0,0.407412341537585,0,0,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0|short_description=p2@Kcnh8}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:211468 | |||
|HGNC= | |||
|MCL_coexpression_id=248 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P59111 | |||
|association_with_transcript=-478bp_to_NM_001031811,uc008czj.1_5end | |||
|cluster_id=chr17:52741567..52741609,+ | |||
|description=CAGE_peak_2_at_Kcnh8_5end | |||
|id=chr17:52741567..52741609,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,2.51e-11,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!1.60e-08!8;UBERON:0003296!1.60e-08!8;UBERON:0010133!1.60e-08!8;UBERON:0001894!1.45e-07!10;UBERON:0006222!1.45e-07!10;UBERON:0001049!3.85e-07!52;UBERON:0005068!3.85e-07!52;UBERON:0006241!3.85e-07!52;UBERON:0007135!3.85e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.00e-49,8;UBERON:0003296,3.00e-49,8;UBERON:0010133,3.00e-49,8;UBERON:0001894,2.20e-39,10;UBERON:0006222,2.20e-39,10;UBERON:0002780,3.82e-16,39;UBERON:0001890,3.82e-16,39;UBERON:0006240,3.82e-16,39;UBERON:0003080,1.00e-15,40;UBERON:0002616,1.34e-13,46;UBERON:0000955,2.69e-13,47;UBERON:0006238,2.69e-13,47;UBERON:0003056,9.95e-13,49;UBERON:0001049,5.87e-12,52;UBERON:0005068,5.87e-12,52;UBERON:0006241,5.87e-12,52;UBERON:0007135,5.87e-12,52;UBERON:0000073,1.72e-11,54;UBERON:0001017,2.65e-10,73;UBERON:0001016,5.23e-10,75;UBERON:0002346,1.37e-09,64;UBERON:0003075,1.37e-09,64;UBERON:0007284,1.37e-09,64;UBERON:0010371,2.55e-08,73;UBERON:0004121,9.89e-08,95;UBERON:0000924,9.89e-08,95;UBERON:0006601,9.89e-08,95;UBERON:0000369,3.73e-07,5;UBERON:0002435,3.73e-07,5;UBERON:0000204,3.73e-07,5;UBERON:0010082,3.73e-07,5 | |||
|phase1_expression=0.640595388419176,0.348975407639361,0,0,0,0.839396359559449,0.700837921786577,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0.159992422793407,0.22940928106717,0,0,0.430942465371778,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0.856952953211411,0.220868540951614,0.244981598429908,0.287536413054709,0,0,0.255374676170375,0,0.527545150920775,1.09785172322892,1.56274011167028,0,0.56276261003168,0.15279824777681,0.294628585473668,0.142371680799103,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0.376963056338593,0.173824320192276,0,0.20778804455956,0,0.203678727700633,0.746441823660558,2.27450482590307,0,0.130120442962704,0,0,0.150704817835715,0.272145996605311,0.2562274405697,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0,0.898819408654221,0.216138049874694,0,0.379335801906163,0,0,0,0.387904974335251,0.140271639780637,0.69560190836683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.321101179975584,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.162886959353576,0,0,0.728341908464944,0.604647113929502,0.565815239267694,0,0.614870295887855,0.775284879504663,0.727067458955011,0.356497378384721,0.316036757935816,0,0,24.5116516142727,0.18006109403131,1.16422815404479,6.00143698088458,15.6059405605201,11.0588666913284,9.3792941743209,2.74018454203139,0,0,0,0,0.161464426695906,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.324016022465404,0.209088296014469,0.218362563746178,0.134864346384821,0.0826534557253359,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0.179026695667481,0,0.240390899039938,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0,0.512200817262403,0.243106717068294,0,0,0.44449345560323,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.17230640686684,0,0.231768651889711,0.77163688185482,0,0.147198920134397,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.188218760830661,0.0846146078916765,0,0,0.407412341537585,0,0,0.0985044823755635,0.409231043169689,0,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0,0 | |||
|short_description=p2@Kcnh8 | |||
}} |
Revision as of 02:30, 5 August 2015
Short description: | p2@Kcnh8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kcnh8_5end |
Coexpression cluster: | MCL_coexpression_mm9:248 |
Association with transcript: | -478bp_to_NM_001031811, uc008czj.1_5end |
EntrezGene: | 211468 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 2.51e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.00e-49 | 8 |
gland of diencephalon | 3.00e-49 | 8 |
neuroendocrine gland | 3.00e-49 | 8 |
diencephalon | 2.20e-39 | 10 |
future diencephalon | 2.20e-39 | 10 |
regional part of forebrain | 3.82e-16 | 39 |
forebrain | 3.82e-16 | 39 |
future forebrain | 3.82e-16 | 39 |
anterior neural tube | 1.00e-15 | 40 |
regional part of brain | 1.34e-13 | 46 |
brain | 2.69e-13 | 47 |
future brain | 2.69e-13 | 47 |
pre-chordal neural plate | 9.95e-13 | 49 |
neural tube | 5.87e-12 | 52 |
neural rod | 5.87e-12 | 52 |
future spinal cord | 5.87e-12 | 52 |
neural keel | 5.87e-12 | 52 |
regional part of nervous system | 1.72e-11 | 54 |
central nervous system | 2.65e-10 | 73 |
nervous system | 5.23e-10 | 75 |
neurectoderm | 1.37e-09 | 64 |
neural plate | 1.37e-09 | 64 |
presumptive neural plate | 1.37e-09 | 64 |
ecto-epithelium | 2.55e-08 | 73 |
ectoderm-derived structure | 9.89e-08 | 95 |
ectoderm | 9.89e-08 | 95 |
presumptive ectoderm | 9.89e-08 | 95 |
corpus striatum | 3.73e-07 | 5 |
striatum | 3.73e-07 | 5 |
ventral part of telencephalon | 3.73e-07 | 5 |
future corpus striatum | 3.73e-07 | 5 |