FFCP PHASE1:Mm9::chr15:25773109..25773116,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2111|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:25773109..25773116,+|id=chr15:25773109..25773116,+|ontology_enrichment_celltype=CL:0000838!6.09e-08!12;CL:0000542!3.26e-07!13;CL:0000051!3.26e-07!13;CL:0000893!4.51e-07!6;CL:0002489!4.51e-07!6;CL:0000898!4.51e-07!6;CL:0000809!4.51e-07!6;CL:0000810!4.51e-07!6;CL:0000895!4.51e-07!6;CL:0000808!4.51e-07!6;CL:0000894!4.51e-07!6;CL:0000806!4.51e-07!6;CL:0000807!4.51e-07!6;CL:0000805!4.51e-07!6;CL:0002425!4.51e-07!6;CL:0002436!4.51e-07!6;CL:0002427!4.51e-07!6;CL:0002428!4.51e-07!6;CL:0002429!4.51e-07!6;CL:0002433!4.51e-07!6;CL:0002431!4.51e-07!6;CL:0002432!4.51e-07!6;CL:0000624!4.92e-07!8|ontology_enrichment_celltype_v019_2=CL:0000893,1.75e-08,6;CL:0002489,1.75e-08,6;CL:0000898,1.75e-08,6;CL:0000809,1.75e-08,6;CL:0000810,1.75e-08,6;CL:0000895,1.75e-08,6;CL:0000808,1.75e-08,6;CL:0000894,1.75e-08,6;CL:0000806,1.75e-08,6;CL:0000807,1.75e-08,6;CL:0000805,1.75e-08,6;CL:0002425,1.75e-08,6;CL:0002436,1.75e-08,6;CL:0002427,1.75e-08,6;CL:0002428,1.75e-08,6;CL:0002429,1.75e-08,6;CL:0002433,1.75e-08,6;CL:0002431,1.75e-08,6;CL:0002432,1.75e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.20e-09,5;UBERON:0001003,1.20e-09,5;UBERON:0002097,1.20e-09,5;UBERON:0002199,1.20e-09,5;UBERON:0007029,1.20e-09,5;UBERON:0007376,1.20e-09,5;UBERON:0002416,1.20e-09,5;UBERON:0007383,1.20e-09,5|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,3.66050677594334,3.7450324211519,0,0.0797721589953364,0.171200729931206,0.174840804837995,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,1.36609096991689,0,0,0,0,0.782391344348039,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0.599902730993408,0,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0.348252166522167,1.4404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0.238968797952552,0,0,0,0,1.18586333383957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,2.26050197374268,1.08563264870681,0.477489376012546,0.656563598980245,0,0,0,0,0,0,0,0,0.509935289981566,0.139951452323658,0.414599921413271,1.90934123603023,0,0,0,0,0.218362563746178,0.134864346384821,0.41326727862668,0.523511883968059,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.288635524920988,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.467863216890817,0.859484216193193,0,0,0|short_description=p@chr15:25773109..25773116,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2111 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr15:25773109..25773116,+ | |||
|description=CAGE_peak_at_chr15:25773109..25773116,+ | |||
|id=chr15:25773109..25773116,+ | |||
|ontology_enrichment_celltype=CL:0000838!6.09e-08!12;CL:0000542!3.26e-07!13;CL:0000051!3.26e-07!13;CL:0000893!4.51e-07!6;CL:0002489!4.51e-07!6;CL:0000898!4.51e-07!6;CL:0000809!4.51e-07!6;CL:0000810!4.51e-07!6;CL:0000895!4.51e-07!6;CL:0000808!4.51e-07!6;CL:0000894!4.51e-07!6;CL:0000806!4.51e-07!6;CL:0000807!4.51e-07!6;CL:0000805!4.51e-07!6;CL:0002425!4.51e-07!6;CL:0002436!4.51e-07!6;CL:0002427!4.51e-07!6;CL:0002428!4.51e-07!6;CL:0002429!4.51e-07!6;CL:0002433!4.51e-07!6;CL:0002431!4.51e-07!6;CL:0002432!4.51e-07!6;CL:0000624!4.92e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000893,1.75e-08,6;CL:0002489,1.75e-08,6;CL:0000898,1.75e-08,6;CL:0000809,1.75e-08,6;CL:0000810,1.75e-08,6;CL:0000895,1.75e-08,6;CL:0000808,1.75e-08,6;CL:0000894,1.75e-08,6;CL:0000806,1.75e-08,6;CL:0000807,1.75e-08,6;CL:0000805,1.75e-08,6;CL:0002425,1.75e-08,6;CL:0002436,1.75e-08,6;CL:0002427,1.75e-08,6;CL:0002428,1.75e-08,6;CL:0002429,1.75e-08,6;CL:0002433,1.75e-08,6;CL:0002431,1.75e-08,6;CL:0002432,1.75e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.20e-09,5;UBERON:0001003,1.20e-09,5;UBERON:0002097,1.20e-09,5;UBERON:0002199,1.20e-09,5;UBERON:0007029,1.20e-09,5;UBERON:0007376,1.20e-09,5;UBERON:0002416,1.20e-09,5;UBERON:0007383,1.20e-09,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,3.66050677594334,3.7450324211519,0,0.0797721589953364,0.171200729931206,0.174840804837995,0,0,0,0,0,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,1.36609096991689,0,0,0,0,0.782391344348039,0,0,0,0,0,0.671130424230945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0.599902730993408,0,0,0,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0.348252166522167,1.4404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.140271639780637,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0.238968797952552,0,0,0,0,1.18586333383957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,2.26050197374268,1.08563264870681,0.477489376012546,0.656563598980245,0,0,0,0,0,0,0,0,0.509935289981566,0.139951452323658,0.414599921413271,1.90934123603023,0,0,0,0,0.218362563746178,0.134864346384821,0.41326727862668,0.523511883968059,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.288635524920988,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0.0640251524048693,0,0,0.231768651889711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.467863216890817,0.859484216193193,0,0,0 | |||
|short_description=p@chr15:25773109..25773116,+ | |||
}} |
Latest revision as of 03:14, 5 August 2015
Short description: | p@chr15:25773109..25773116, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:25773109..25773116, + |
Coexpression cluster: | MCL_coexpression_mm9:2111 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymocyte | 1.75e-08 | 6 |
double negative thymocyte | 1.75e-08 | 6 |
naive T cell | 1.75e-08 | 6 |
double-positive, alpha-beta thymocyte | 1.75e-08 | 6 |
CD4-positive, alpha-beta thymocyte | 1.75e-08 | 6 |
naive thymus-derived CD4-positive, alpha-beta T cell | 1.75e-08 | 6 |
DN4 thymocyte | 1.75e-08 | 6 |
DN1 thymic pro-T cell | 1.75e-08 | 6 |
DN2 thymocyte | 1.75e-08 | 6 |
DN3 thymocyte | 1.75e-08 | 6 |
immature single positive thymocyte | 1.75e-08 | 6 |
early T lineage precursor | 1.75e-08 | 6 |
mature CD4 single-positive thymocyte | 1.75e-08 | 6 |
resting double-positive thymocyte | 1.75e-08 | 6 |
double-positive blast | 1.75e-08 | 6 |
CD69-positive double-positive thymocyte | 1.75e-08 | 6 |
CD69-positive, CD4-positive single-positive thymocyte | 1.75e-08 | 6 |
CD4-positive, CD8-intermediate double-positive thymocyte | 1.75e-08 | 6 |
CD24-positive, CD4 single-positive thymocyte | 1.75e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.20e-09 | 5 |
skin epidermis | 1.20e-09 | 5 |
skin of body | 1.20e-09 | 5 |
integument | 1.20e-09 | 5 |
surface | 1.20e-09 | 5 |
outer epithelium | 1.20e-09 | 5 |
integumental system | 1.20e-09 | 5 |
enveloping layer of ectoderm | 1.20e-09 | 5 |