Personal tools

FFCP PHASE1:Mm9::chr15:3229285..3229296,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 1: Line 1:
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2136|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:3229285..3229296,+|id=chr15:3229285..3229296,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,2.08e-09,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!9.41e-12!25;UBERON:0002330!9.41e-12!25;UBERON:0002107!1.10e-11!22;UBERON:0007499!1.10e-11!22;UBERON:0006925!1.10e-11!22;UBERON:0009497!1.10e-11!22;UBERON:0000015!1.10e-11!22;UBERON:0002423!1.10e-11!22;UBERON:0006235!1.10e-11!22;UBERON:0008835!1.10e-11!22;UBERON:0003894!1.10e-11!22;UBERON:0004161!1.10e-11!22;UBERON:0008836!1.10e-11!22;UBERON:0009854!1.14e-10!23;UBERON:0009856!1.14e-10!23;UBERON:0005172!4.58e-08!49;UBERON:0005173!4.58e-08!49;UBERON:0002417!4.58e-08!49;UBERON:0000916!4.58e-08!49;UBERON:0004119!2.44e-07!130;UBERON:0000925!2.44e-07!130;UBERON:0006595!2.44e-07!130;UBERON:0005256!3.93e-07!47;UBERON:0001007!9.54e-07!128;UBERON:0001555!9.54e-07!128;UBERON:0007026!9.54e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0002365,5.07e-20,25;UBERON:0002330,5.07e-20,25;UBERON:0002107,1.54e-18,22;UBERON:0007499,1.54e-18,22;UBERON:0006925,1.54e-18,22;UBERON:0009497,1.54e-18,22;UBERON:0000015,1.54e-18,22;UBERON:0002423,1.54e-18,22;UBERON:0006235,1.54e-18,22;UBERON:0008835,1.54e-18,22;UBERON:0003894,1.54e-18,22;UBERON:0004161,1.54e-18,22;UBERON:0008836,1.54e-18,22;UBERON:0009854,1.56e-17,23;UBERON:0009856,1.56e-17,23;UBERON:0004119,3.20e-10,118;UBERON:0000925,3.20e-10,118;UBERON:0006595,3.20e-10,118;UBERON:0001007,1.02e-09,116;UBERON:0001555,1.02e-09,116;UBERON:0007026,1.02e-09,116;UBERON:0004921,2.14e-08,114;UBERON:0000160,4.17e-08,31;UBERON:0005256,8.36e-08,45;UBERON:0005172,1.10e-07,49;UBERON:0005173,1.10e-07,49;UBERON:0002417,1.10e-07,49;UBERON:0000916,1.10e-07,49;UBERON:0003929,2.40e-07,55;UBERON:0003914,3.04e-07,47|phase1_expression=0,0.697950815278722,3.18499467572675,0.60492842261366,1.50268718983904,0,0,0,0,0.234064526321993,0,0,0,0.0874204024189974,0,0.202475267389826,1.39912375625629,0,0,0,0.765389611359628,0,0,2.55987876469451,2.2940928106717,0.57423196411502,1.29228598847722,1.29282739611533,2.28028103347649,2.01624103807945,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.917733760808408,0,0,0,0,0,0,0,0,0,0.771778308107841,0.573066879877513,0.515672092277442,0,0,0,0,0.889294796111139,0.449949858640699,0.988866362566974,0.7104801149461,0.898800331555214,0.384218305321555,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,2.58127163094416,10.1995700056163,2.69851595818909,11.0461990966104,7.16843019355737,2.38755514223978,0.170430322578058,0,0,0,1.28326477414318,0,0,0,0,0,6.39429726426736,1.29468941823586,0.593768556259299,0.520455980298408,0.608930956624282,0,0,1.29347577849275,0,2.47194967734374,0.722996784599558,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0,2.09446706813455,4.59822699375465,0,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0,0,0.20778804455956,0,0.407357455401265,0.248813941220186,0.252722758433675,0,0.130120442962704,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0.567318240503458,0,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0,0.473489471170421,0,0,0,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0,1.07365135008297,0,0.514523061896422,4.95628174475697,0,0,0,0.128867461322093,0.403367049246685,0.889512175379481,1.14135375667535,3.79623249235609,3.12928013975621,0.754005626400808,2.38747766449381,0.974820435595601,7.19055526923377,3.24207074812041,3.78368419183298,1.13800740571849,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.252946148497029,0.147610147979602,0.470996183524124,0.616985819609003,3.26097889795864,0.333690211432188,0.589676985339609,0.224862112384854,0.405720242777006,0.241177159752417,0.50925170356284,3.16465751195892,17.5106044917038,3.0201755450689,11.5014565221884,5.95425516269605,4.36852742360385,1.51547326768267,3.94674309748207,6.27176577772377,0,0,0,0.169745085775188,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0,0.956728611944923,0.327726629431476,0.172684981865896,0.578596234326046,1.50791283939272,1.08781136763742,1.96705709207614,1.65562047782839,0.321101179975584,0.117211686592203,0,0.757412781613119,0,0.390438744296638,0,0.238968797952552,0.668396022247182,0,0,0.292255857911312,0,0,0.99358059645788,0,0.488660878060728,1.15479086080775,1.32745138339963,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0.516856586336442,0.727067458955011,1.06949213515416,0.316036757935816,0,1.03135543248187,0,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,1.87737366450968,0.847328283455281,0.220528398054962,0,0.322928853391811,0.120625849856312,0.119372344003136,0,3.49777003955821,0.370850604021019,0.341741761595705,0.206386867963223,0.185194527369712,0.376736914009382,0,0,0,0,0,2.86401185404534,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0.539457385539283,0.743881101528023,0.26175594198403,0.90730481304255,0,0,0.149516546043979,0.330916980914195,0,0.258319646955462,0.168956125490778,0.352071715937262,0,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0.384847366561318,0.584384510907845,0.226730383615211,0,0,0,0.19318959403219,0.563047426353546,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.666740183404846,0.618105171716683,0.962757628775446,0,0.50695859978048,0.377252682772152,0.280924522409647,0.320125762024346,0.287177344778066,0.476293691283074,0.579421629724277,0.192909220463705,0,0.441596760403192,0,0.887379030796687,0,0.145346416632329,0.282328141245992,0.25384382367503,0.548783918618318,0.526139422875686,0.543216455383447,0,0.711810108745045,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0.249810577937946,0.467863216890817,1.71896843238639,0.956441660344217,0.441182838239031,0.231867835620421|short_description=p@chr15:3229285..3229296,+}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=2136
|TSSclassifier=NA
|UniProt=NA
|association_with_transcript=NA
|cluster_id=chr15:3229285..3229296,+
|description=CAGE_peak_at_chr15:3229285..3229296,+
|id=chr15:3229285..3229296,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,2.08e-09,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!9.41e-12!25;UBERON:0002330!9.41e-12!25;UBERON:0002107!1.10e-11!22;UBERON:0007499!1.10e-11!22;UBERON:0006925!1.10e-11!22;UBERON:0009497!1.10e-11!22;UBERON:0000015!1.10e-11!22;UBERON:0002423!1.10e-11!22;UBERON:0006235!1.10e-11!22;UBERON:0008835!1.10e-11!22;UBERON:0003894!1.10e-11!22;UBERON:0004161!1.10e-11!22;UBERON:0008836!1.10e-11!22;UBERON:0009854!1.14e-10!23;UBERON:0009856!1.14e-10!23;UBERON:0005172!4.58e-08!49;UBERON:0005173!4.58e-08!49;UBERON:0002417!4.58e-08!49;UBERON:0000916!4.58e-08!49;UBERON:0004119!2.44e-07!130;UBERON:0000925!2.44e-07!130;UBERON:0006595!2.44e-07!130;UBERON:0005256!3.93e-07!47;UBERON:0001007!9.54e-07!128;UBERON:0001555!9.54e-07!128;UBERON:0007026!9.54e-07!128
|ontology_enrichment_uberon_v019_2=UBERON:0002365,5.07e-20,25;UBERON:0002330,5.07e-20,25;UBERON:0002107,1.54e-18,22;UBERON:0007499,1.54e-18,22;UBERON:0006925,1.54e-18,22;UBERON:0009497,1.54e-18,22;UBERON:0000015,1.54e-18,22;UBERON:0002423,1.54e-18,22;UBERON:0006235,1.54e-18,22;UBERON:0008835,1.54e-18,22;UBERON:0003894,1.54e-18,22;UBERON:0004161,1.54e-18,22;UBERON:0008836,1.54e-18,22;UBERON:0009854,1.56e-17,23;UBERON:0009856,1.56e-17,23;UBERON:0004119,3.20e-10,118;UBERON:0000925,3.20e-10,118;UBERON:0006595,3.20e-10,118;UBERON:0001007,1.02e-09,116;UBERON:0001555,1.02e-09,116;UBERON:0007026,1.02e-09,116;UBERON:0004921,2.14e-08,114;UBERON:0000160,4.17e-08,31;UBERON:0005256,8.36e-08,45;UBERON:0005172,1.10e-07,49;UBERON:0005173,1.10e-07,49;UBERON:0002417,1.10e-07,49;UBERON:0000916,1.10e-07,49;UBERON:0003929,2.40e-07,55;UBERON:0003914,3.04e-07,47
|phase1_expression=0,0.697950815278722,3.18499467572675,0.60492842261366,1.50268718983904,0,0,0,0,0.234064526321993,0,0,0,0.0874204024189974,0,0.202475267389826,1.39912375625629,0,0,0,0.765389611359628,0,0,2.55987876469451,2.2940928106717,0.57423196411502,1.29228598847722,1.29282739611533,2.28028103347649,2.01624103807945,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.917733760808408,0,0,0,0,0,0,0,0,0,0.771778308107841,0.573066879877513,0.515672092277442,0,0,0,0,0.889294796111139,0.449949858640699,0.988866362566974,0.7104801149461,0.898800331555214,0.384218305321555,0,0,0,0.285650984403804,0,0,0.0958454710182364,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,2.58127163094416,10.1995700056163,2.69851595818909,11.0461990966104,7.16843019355737,2.38755514223978,0.170430322578058,0,0,0,1.28326477414318,0,0,0,0,0,6.39429726426736,1.29468941823586,0.593768556259299,0.520455980298408,0.608930956624282,0,0,1.29347577849275,0,2.47194967734374,0.722996784599558,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0,2.09446706813455,4.59822699375465,0,0,0,0.149790639404823,0.457500602818626,0.125654352112864,0,0,0.20778804455956,0,0.407357455401265,0.248813941220186,0.252722758433675,0,0.130120442962704,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0.567318240503458,0,0,0,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0,0.473489471170421,0,0,0,0,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0,1.07365135008297,0,0.514523061896422,4.95628174475697,0,0,0,0.128867461322093,0.403367049246685,0.889512175379481,1.14135375667535,3.79623249235609,3.12928013975621,0.754005626400808,2.38747766449381,0.974820435595601,7.19055526923377,3.24207074812041,3.78368419183298,1.13800740571849,0.114248512609729,0,0.203651327845314,0.193952487167626,0.280543279561274,0.252946148497029,0.147610147979602,0.470996183524124,0.616985819609003,3.26097889795864,0.333690211432188,0.589676985339609,0.224862112384854,0.405720242777006,0.241177159752417,0.50925170356284,3.16465751195892,17.5106044917038,3.0201755450689,11.5014565221884,5.95425516269605,4.36852742360385,1.51547326768267,3.94674309748207,6.27176577772377,0,0,0,0.169745085775188,0,0,0.238043640886014,0.390267295715598,0.472905432318573,0,0.956728611944923,0.327726629431476,0.172684981865896,0.578596234326046,1.50791283939272,1.08781136763742,1.96705709207614,1.65562047782839,0.321101179975584,0.117211686592203,0,0.757412781613119,0,0.390438744296638,0,0.238968797952552,0.668396022247182,0,0,0.292255857911312,0,0,0.99358059645788,0,0.488660878060728,1.15479086080775,1.32745138339963,0,0.302323556964751,0.377210159511796,0,0.307435147943927,0.516856586336442,0.727067458955011,1.06949213515416,0.316036757935816,0,1.03135543248187,0,0,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,1.87737366450968,0.847328283455281,0.220528398054962,0,0.322928853391811,0.120625849856312,0.119372344003136,0,3.49777003955821,0.370850604021019,0.341741761595705,0.206386867963223,0.185194527369712,0.376736914009382,0,0,0,0,0,2.86401185404534,0.158167996790568,0,0.216010681643603,0,0.218362563746178,0.539457385539283,0.743881101528023,0.26175594198403,0.90730481304255,0,0,0.149516546043979,0.330916980914195,0,0.258319646955462,0.168956125490778,0.352071715937262,0,0.104859344425711,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0.384847366561318,0.584384510907845,0.226730383615211,0,0,0,0.19318959403219,0.563047426353546,0.183151624267265,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.666740183404846,0.618105171716683,0.962757628775446,0,0.50695859978048,0.377252682772152,0.280924522409647,0.320125762024346,0.287177344778066,0.476293691283074,0.579421629724277,0.192909220463705,0,0.441596760403192,0,0.887379030796687,0,0.145346416632329,0.282328141245992,0.25384382367503,0.548783918618318,0.526139422875686,0.543216455383447,0,0.711810108745045,0.197008964751127,0.409231043169689,0.309873682371932,0.385813221962283,0.249810577937946,0.467863216890817,1.71896843238639,0.956441660344217,0.441182838239031,0.231867835620421
|short_description=p@chr15:3229285..3229296,+
}}

Latest revision as of 04:25, 5 August 2015

Short description:p@chr15:3229285..3229296, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr15:3229285..3229296, +
Coexpression cluster:MCL_coexpression_mm9:2136
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr15:3229285..3229296+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.29
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B92.28
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C410.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F411.05
Mouse hepatocyte, donor8.CNhs13091.11824-124F67.17
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.39
accessory axillary lymph node, adult.CNhs10475.1063-29H91.29
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A82.47
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H74.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D13.80
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E33.24
intestine, neonate N30.CNhs11131.1384-42G13.78
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B23.26
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F417.51
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte2.08e-095

Uber anatomy
Ontology termp-valuen
exocrine gland5.07e-2025
exocrine system5.07e-2025
liver1.54e-1822
epithelial sac1.54e-1822
digestive gland1.54e-1822
epithelium of foregut-midgut junction1.54e-1822
anatomical boundary1.54e-1822
hepatobiliary system1.54e-1822
foregut-midgut junction1.54e-1822
hepatic diverticulum1.54e-1822
liver primordium1.54e-1822
septum transversum1.54e-1822
liver bud1.54e-1822
digestive tract diverticulum1.56e-1723
sac1.56e-1723
endoderm-derived structure3.20e-10118
endoderm3.20e-10118
presumptive endoderm3.20e-10118
digestive system1.02e-09116
digestive tract1.02e-09116
primitive gut1.02e-09116
subdivision of digestive tract2.14e-08114
intestine4.17e-0831
trunk mesenchyme8.36e-0845
abdomen element1.10e-0749
abdominal segment element1.10e-0749
abdominal segment of trunk1.10e-0749
abdomen1.10e-0749
gut epithelium2.40e-0755
epithelial tube3.04e-0747
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:3229285..3229296,%2B&oldid=3858341"