FFCP PHASE1:Mm9::chr15:34372931..34372959,-: Difference between revisions
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{{FFCP|EntrezGene=100504405,19946,619883,664969|HGNC=|MCL_coexpression_id=268|UniProt=|association_with_transcript=-16bp_to_ENSMUST00000135417_5end|description=CAGE_peak_2_at_Gm6109_5end,CAGE_peak_2_at_Gm7429_5end,CAGE_peak_2_at_Rpl30-ps10_5end,CAGE_peak_2_at_Rpl30_5end|id=chr15:34372931..34372959,-|ontology_enrichment_celltype=CL:0000548!2.21e-07!115;CL:0000004!2.21e-07!115;CL:0000255!2.21e-07!115;CL:0000034!2.33e-07!97;CL:0000144!2.83e-07!121;CL:0000012!2.83e-07!121;CL:0002371!4.67e-07!118;CL:0000540!5.94e-07!33;CL:0000047!5.94e-07!33;CL:0000031!5.94e-07!33;CL:0000404!5.94e-07!33|ontology_enrichment_celltype_v019_2=CL:0000034,2.29e-07,97;CL:0000540,5.94e-07,33;CL:0000047,5.94e-07,33;CL:0000031,5.94e-07,33;CL:0000404,5.94e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=|phase1_expression=9.28863313207805,4.53668029931169,2.27499619694768,1.20985684522732,2.00358291978539,6.21153306073992,6.77476657727024,2.45334314538995,10.13678799492,7.2560003159818,13.5262194898149,9.89174771542172,2.39681021903688,2.53519167015092,8.99396356902289,4.45445588257617,4.19737126876888,2.99689057090326,3.42786084014347,5.51706547337439,3.57181818634493,6.35462087685666,12.015190300391,5.59973479776923,7.34109699414944,9.76194338995534,9.04600191934057,8.18790684206378,3.80046838912748,5.54466285471848,13.5255611499736,10.7955214488137,8.61090702618398,0,10.3986583110459,11.802659820453,8.98345167554424,2.92972141515835,7.813353445238,3.66466620781659,2.94115744015507,4.09827290975067,2.42755176515577,5.5394599909254,4.56196190487815,6.79122982998222,6.25913075478431,5.45062890951116,3.73466510648602,6.22175677037707,5.5994568650145,4.31257693094915,6.04017381807851,4.35217285206807,3.36093799142464,4.11615097657515,6.5902691185914,2.57836046138721,11.7343547298567,6.87688273053643,8.87363964908651,4.06613438482959,1.77858959222228,3.5995988691256,3.9554654502679,2.1314403448383,3.89480143673926,2.30530983192933,8.39885859698669,8.50537411489651,8.41299845405528,9.42648248532552,9.27647871996777,7.96190194897201,7.47594673942244,9.19218786610021,4.40463523997555,3.95830748064082,3.84016333140609,7.91317726381163,9.33173964744578,7.8137005583514,3.90856198601933,5.6276261003168,4.88954392885792,8.2496003932627,9.5389026135399,12.8615617619457,9.69295274664756,6.49915416918356,2.89864488701678,3.44169550792555,4.75979933595425,6.47643829965381,4.54843492213368,7.16843019355737,2.24711072210803,10.5666799998396,11.6903702071291,13.0735642568826,5.91542363062058,3.84979432242953,2.54805239706646,0,11.9070072556168,9.37431502257865,8.59391556525132,2.16949371466214,0.258937883647172,2.07818994690755,10.9295755862666,5.48037860961854,6.6878494204257,7.38540938707851,2.82212897125692,3.01599819191221,0.741584903203122,0.722996784599558,3.5384422077995,4.52947179852746,2.20841518460394,3.39412677194655,1.86391761218122,1.75668478206928,3.14170060220183,3.83185582812887,13.6589241936749,35.9941638596045,15.3754974758408,2.84602214869163,1.83000241127451,5.90575454930463,3.12883776346098,2.55715457330331,3.1168206683934,2.75810147215188,3.66621709861139,2.11491850037158,4.29628689337247,0.631325567659422,10.2795149940536,9.19608417733892,5.58192602396583,7.68594570962147,3.74200745332303,4.22775276940004,5.62210347358373,2.84573707812917,8.62271971731369,8.69887968771969,6.68614271823006,9.20622076195814,7.22922847986555,4.52727816478817,6.1734640922383,8.16040493955822,23.1730351813367,18.2717014051448,15.6289924667576,5.38527008592305,5.62862543954631,8.4629168886677,4.26140524053378,4.72234156193769,4.9365476123961,7.90615412151387,4.29237442239391,3.50296027101508,5.59503489705834,2.95501435342371,1.94565142910054,2.92399974850665,1.3173006917463,0.805238512562231,4.20579897128254,6.79170441703277,0,5.28901133327089,13.2238715331845,9.75394021813842,5.41243337552792,4.03367049246685,5.33707305227689,3.23383564391351,1.89811624617805,5.59976446061637,5.7807098024062,2.18852119245266,3.31438948102504,1.79763881730844,3.45820879799511,3.98282546508734,7.58671603812327,12.5673363870702,5.63538678365402,7.33144780243131,7.75809948670503,3.57692681440625,3.03535378196435,1.62371162777562,2.35498091762062,1.97435462274881,2.37162101669719,9.84386123724955,8.84515478009414,7.19558759631532,7.50582449137461,3.85883455603867,5.0925170356284,2.5892652370573,5.0261920300261,8.78596522201861,11.5014565221884,1.86070473834252,4.99260276983297,3.78868316920668,4.30553792452589,1.4473305640901,1.66277871149944,11.7484675297701,6.35563408123901,10.6939404038369,9.38760993154008,3.85264392116176,2.38043640886014,3.90267295715598,2.83743259391144,1.99318220683897,2.55127629851979,1.96635977658886,2.24490476425664,1.59113964439663,3.01582567878545,3.26343410291226,5.90117127622843,5.24279817978992,2.24770825982909,2.69586879162067,13.9344703570174,2.7771801992481,10.4117712407365,8.19921363022941,8.18608911384636,6.4521575447189,9.13474563737816,6.79383673893198,10.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:100504405,entrezgene:19946,entrezgene:619883,entrezgene:664969 | |||
|HGNC= | |||
|MCL_coexpression_id=268 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-16bp_to_ENSMUST00000135417_5end | |||
|cluster_id=chr15:34372931..34372959,- | |||
|description=CAGE_peak_2_at_Gm6109_5end,CAGE_peak_2_at_Gm7429_5end,CAGE_peak_2_at_Rpl30-ps10_5end,CAGE_peak_2_at_Rpl30_5end | |||
|id=chr15:34372931..34372959,- | |||
|ontology_enrichment_celltype=CL:0000548!2.21e-07!115;CL:0000004!2.21e-07!115;CL:0000255!2.21e-07!115;CL:0000034!2.33e-07!97;CL:0000144!2.83e-07!121;CL:0000012!2.83e-07!121;CL:0002371!4.67e-07!118;CL:0000540!5.94e-07!33;CL:0000047!5.94e-07!33;CL:0000031!5.94e-07!33;CL:0000404!5.94e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.29e-07,97;CL:0000540,5.94e-07,33;CL:0000047,5.94e-07,33;CL:0000031,5.94e-07,33;CL:0000404,5.94e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=9.28863313207805,4.53668029931169,2.27499619694768,1.20985684522732,2.00358291978539,6.21153306073992,6.77476657727024,2.45334314538995,10.13678799492,7.2560003159818,13.5262194898149,9.89174771542172,2.39681021903688,2.53519167015092,8.99396356902289,4.45445588257617,4.19737126876888,2.99689057090326,3.42786084014347,5.51706547337439,3.57181818634493,6.35462087685666,12.015190300391,5.59973479776923,7.34109699414944,9.76194338995534,9.04600191934057,8.18790684206378,3.80046838912748,5.54466285471848,13.5255611499736,10.7955214488137,8.61090702618398,0,10.3986583110459,11.802659820453,8.98345167554424,2.92972141515835,7.813353445238,3.66466620781659,2.94115744015507,4.09827290975067,2.42755176515577,5.5394599909254,4.56196190487815,6.79122982998222,6.25913075478431,5.45062890951116,3.73466510648602,6.22175677037707,5.5994568650145,4.31257693094915,6.04017381807851,4.35217285206807,3.36093799142464,4.11615097657515,6.5902691185914,2.57836046138721,11.7343547298567,6.87688273053643,8.87363964908651,4.06613438482959,1.77858959222228,3.5995988691256,3.9554654502679,2.1314403448383,3.89480143673926,2.30530983192933,8.39885859698669,8.50537411489651,8.41299845405528,9.42648248532552,9.27647871996777,7.96190194897201,7.47594673942244,9.19218786610021,4.40463523997555,3.95830748064082,3.84016333140609,7.91317726381163,9.33173964744578,7.8137005583514,3.90856198601933,5.6276261003168,4.88954392885792,8.2496003932627,9.5389026135399,12.8615617619457,9.69295274664756,6.49915416918356,2.89864488701678,3.44169550792555,4.75979933595425,6.47643829965381,4.54843492213368,7.16843019355737,2.24711072210803,10.5666799998396,11.6903702071291,13.0735642568826,5.91542363062058,3.84979432242953,2.54805239706646,0,11.9070072556168,9.37431502257865,8.59391556525132,2.16949371466214,0.258937883647172,2.07818994690755,10.9295755862666,5.48037860961854,6.6878494204257,7.38540938707851,2.82212897125692,3.01599819191221,0.741584903203122,0.722996784599558,3.5384422077995,4.52947179852746,2.20841518460394,3.39412677194655,1.86391761218122,1.75668478206928,3.14170060220183,3.83185582812887,13.6589241936749,35.9941638596045,15.3754974758408,2.84602214869163,1.83000241127451,5.90575454930463,3.12883776346098,2.55715457330331,3.1168206683934,2.75810147215188,3.66621709861139,2.11491850037158,4.29628689337247,0.631325567659422,10.2795149940536,9.19608417733892,5.58192602396583,7.68594570962147,3.74200745332303,4.22775276940004,5.62210347358373,2.84573707812917,8.62271971731369,8.69887968771969,6.68614271823006,9.20622076195814,7.22922847986555,4.52727816478817,6.1734640922383,8.16040493955822,23.1730351813367,18.2717014051448,15.6289924667576,5.38527008592305,5.62862543954631,8.4629168886677,4.26140524053378,4.72234156193769,4.9365476123961,7.90615412151387,4.29237442239391,3.50296027101508,5.59503489705834,2.95501435342371,1.94565142910054,2.92399974850665,1.3173006917463,0.805238512562231,4.20579897128254,6.79170441703277,0,5.28901133327089,13.2238715331845,9.75394021813842,5.41243337552792,4.03367049246685,5.33707305227689,3.23383564391351,1.89811624617805,5.59976446061637,5.7807098024062,2.18852119245266,3.31438948102504,1.79763881730844,3.45820879799511,3.98282546508734,7.58671603812327,12.5673363870702,5.63538678365402,7.33144780243131,7.75809948670503,3.57692681440625,3.03535378196435,1.62371162777562,2.35498091762062,1.97435462274881,2.37162101669719,9.84386123724955,8.84515478009414,7.19558759631532,7.50582449137461,3.85883455603867,5.0925170356284,2.5892652370573,5.0261920300261,8.78596522201861,11.5014565221884,1.86070473834252,4.99260276983297,3.78868316920668,4.30553792452589,1.4473305640901,1.66277871149944,11.7484675297701,6.35563408123901,10.6939404038369,9.38760993154008,3.85264392116176,2.38043640886014,3.90267295715598,2.83743259391144,1.99318220683897,2.55127629851979,1.96635977658886,2.24490476425664,1.59113964439663,3.01582567878545,3.26343410291226,5.90117127622843,5.24279817978992,2.24770825982909,2.69586879162067,13.9344703570174,2.7771801992481,10.4117712407365,8.19921363022941,8.18608911384636,6.4521575447189,9.13474563737816,6.79383673893198,10.1202675418724,9.35218745316198,5.92931666919785,2.57057053137446,1.56134093729095,4.80777129901589,5.21238269931443,4.78413356620353,3.98235415019888,14.5668381692989,16.6277956330613,20.7465587731488,10.9261700365886,7.99331384654211,4.39328098385976,7.63420831902762,12.1209108650805,9.7971394960103,12.6502330289999,9.28219889233682,3.40439605753788,10.9837267359099,5.43306471887569,6.00143698088458,3.72414490648775,4.45922044005176,4.93647061806363,3.34911444026059,5.16277757740163,1.69465656691056,1.7642271844397,4.28704257647848,3.22928853391811,5.06628569396509,4.65552141612232,3.61109979439135,5.24665505933731,2.59595422814714,4.27177201994632,8.46186158649212,7.22258656741876,5.46268525313604,6.69801715833023,6.63456702298916,5.43930975980337,6.57771825921193,6.21899882119907,7.63736494412091,8.38290382990009,7.1161813494397,7.99239522081329,6.0635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| |||
|short_description=p2@Gm6109,p2@Gm7429,p2@Rpl30-ps10,p2@Rpl30 | |||
}} |
Revision as of 04:45, 5 August 2015
Short description: | p2@Gm6109, p2@Gm7429, p2@Rpl30-ps10, p2@Rpl30 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gm6109_5end, CAGE_peak_2_at_Gm7429_5end, CAGE_peak_2_at_Rpl30-ps10_5end, CAGE_peak_2_at_Rpl30_5end |
Coexpression cluster: | MCL_coexpression_mm9:268 |
Association with transcript: | -16bp_to_ENSMUST00000135417_5end |
EntrezGene: | 100504405,19946,619883,664969 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.29e-07 | 97 |
neuron | 5.94e-07 | 33 |
neuronal stem cell | 5.94e-07 | 33 |
neuroblast | 5.94e-07 | 33 |
electrically signaling cell | 5.94e-07 | 33 |