FFCP PHASE1:Mm9::chr9:46050186..46050203,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=312|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:46050186..46050203,+|id=chr9:46050186..46050203,+|ontology_enrichment_celltype=CL:0000239!1.73e-09!6;CL:0000677!1.73e-09!6;CL:0000212!1.73e-09!6;CL:0000584!1.73e-09!6;CL:0000075!5.50e-08!7;CL:0002563!6.46e-08!9;CL:0002251!6.46e-08!9|ontology_enrichment_celltype_v019_2=CL:0000682,5.74e-11,3;CL:0000239,9.50e-10,6;CL:0000677,9.50e-10,6;CL:0000584,9.50e-10,6;CL:0000075,2.25e-08,7;CL:0000066,4.83e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!7.94e-21!59;UBERON:0000160!1.56e-19!43;UBERON:0000344!1.32e-12!15;UBERON:0001242!3.79e-10!13;UBERON:0000060!3.79e-10!13;UBERON:0001262!3.79e-10!13;UBERON:0004786!3.79e-10!13;UBERON:0004923!1.52e-09!24;UBERON:0003350!6.46e-08!9;UBERON:0004808!6.46e-08!9;UBERON:0001277!6.46e-08!9;UBERON:0004119!1.20e-07!130;UBERON:0000925!1.20e-07!130;UBERON:0006595!1.20e-07!130;UBERON:0001007!2.68e-07!128;UBERON:0001555!2.68e-07!128;UBERON:0007026!2.68e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.94e-33,31;UBERON:0005409,1.56e-20,47;UBERON:0001007,1.78e-08,116;UBERON:0001555,1.78e-08,116;UBERON:0007026,1.78e-08,116;UBERON:0004119,2.85e-08,118;UBERON:0000925,2.85e-08,118;UBERON:0006595,2.85e-08,118;UBERON:0000344,3.44e-08,15;UBERON:0004921,1.29e-07,114;UBERON:0001242,8.01e-07,13;UBERON:0001262,8.01e-07,13;UBERON:0004786,8.01e-07,13|phase1_expression=0,1.39590163055744,1.36499771816861,1.81478526784098,2.50447864973174,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.37645568640302,1.14846392823004,1.29228598847722,1.50829862880122,0,0.252030129759931,0.221730510655305,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,2.719885334831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,3.95511948374998,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,0.793351699990633,0,0,0.257734922644187,1.4117846723634,3.33567065767305,5.89699440948933,4.2707615539006,4.11747386810027,2.76468729680296,3.78017296878187,3.31438948102504,2.69645822596266,2.59365659849633,3.58454291857861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.320125762024346,0.17230640686684,0,0.231768651889711,0.192909220463705,1.23625770240992,0,0.342869252385415,0.532427418478012,0.476872379894642,0,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p@chr9:46050186..46050203,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=312 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:46050186..46050203,+ | |||
|description=CAGE_peak_at_chr9:46050186..46050203,+ | |||
|id=chr9:46050186..46050203,+ | |||
|ontology_enrichment_celltype=CL:0000239!1.73e-09!6;CL:0000677!1.73e-09!6;CL:0000212!1.73e-09!6;CL:0000584!1.73e-09!6;CL:0000075!5.50e-08!7;CL:0002563!6.46e-08!9;CL:0002251!6.46e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,5.74e-11,3;CL:0000239,9.50e-10,6;CL:0000677,9.50e-10,6;CL:0000584,9.50e-10,6;CL:0000075,2.25e-08,7;CL:0000066,4.83e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!7.94e-21!59;UBERON:0000160!1.56e-19!43;UBERON:0000344!1.32e-12!15;UBERON:0001242!3.79e-10!13;UBERON:0000060!3.79e-10!13;UBERON:0001262!3.79e-10!13;UBERON:0004786!3.79e-10!13;UBERON:0004923!1.52e-09!24;UBERON:0003350!6.46e-08!9;UBERON:0004808!6.46e-08!9;UBERON:0001277!6.46e-08!9;UBERON:0004119!1.20e-07!130;UBERON:0000925!1.20e-07!130;UBERON:0006595!1.20e-07!130;UBERON:0001007!2.68e-07!128;UBERON:0001555!2.68e-07!128;UBERON:0007026!2.68e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.94e-33,31;UBERON:0005409,1.56e-20,47;UBERON:0001007,1.78e-08,116;UBERON:0001555,1.78e-08,116;UBERON:0007026,1.78e-08,116;UBERON:0004119,2.85e-08,118;UBERON:0000925,2.85e-08,118;UBERON:0006595,2.85e-08,118;UBERON:0000344,3.44e-08,15;UBERON:0004921,1.29e-07,114;UBERON:0001242,8.01e-07,13;UBERON:0001262,8.01e-07,13;UBERON:0004786,8.01e-07,13 | |||
|phase1_expression=0,1.39590163055744,1.36499771816861,1.81478526784098,2.50447864973174,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.95995453676044,1.37645568640302,1.14846392823004,1.29228598847722,1.50829862880122,0,0.252030129759931,0.221730510655305,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,2.719885334831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,3.95511948374998,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,0.793351699990633,0,0,0.257734922644187,1.4117846723634,3.33567065767305,5.89699440948933,4.2707615539006,4.11747386810027,2.76468729680296,3.78017296878187,3.31438948102504,2.69645822596266,2.59365659849633,3.58454291857861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,4.08073171281791,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.320125762024346,0.17230640686684,0,0.231768651889711,0.192909220463705,1.23625770240992,0,0.342869252385415,0.532427418478012,0.476872379894642,0,0.0941093804153306,0.25384382367503,0.182927972872773,0.263069711437843,0,0,0,0.0985044823755635,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr9:46050186..46050203,+ | |||
}} |
Latest revision as of 05:35, 5 August 2015
Short description: | p@chr9:46050186..46050203, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:46050186..46050203, + |
Coexpression cluster: | MCL_coexpression_mm9:312 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 5.74e-11 | 3 |
brush border epithelial cell | 9.50e-10 | 6 |
gut absorptive cell | 9.50e-10 | 6 |
enterocyte | 9.50e-10 | 6 |
columnar/cuboidal epithelial cell | 2.25e-08 | 7 |
epithelial cell | 4.83e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.94e-33 | 31 |
gastrointestinal system | 1.56e-20 | 47 |
digestive system | 1.78e-08 | 116 |
digestive tract | 1.78e-08 | 116 |
primitive gut | 1.78e-08 | 116 |
endoderm-derived structure | 2.85e-08 | 118 |
endoderm | 2.85e-08 | 118 |
presumptive endoderm | 2.85e-08 | 118 |
mucosa | 3.44e-08 | 15 |
subdivision of digestive tract | 1.29e-07 | 114 |
intestinal mucosa | 8.01e-07 | 13 |
wall of intestine | 8.01e-07 | 13 |
gastrointestinal system mucosa | 8.01e-07 | 13 |