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FFCP PHASE1:Mm9::chr17:66121975..66121990,-: Difference between revisions

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{{FFCP|EntrezGene=106572|HGNC=|MCL_coexpression_id=176|UniProt=Q3TM43|association_with_transcript=0bp_to_ENSMUST00000165932_5end|description=CAGE_peak_1_at_Rab31_5end|id=chr17:66121975..66121990,-|ontology_enrichment_celltype=CL:0000055!5.17e-16!50;CL:0002319!6.60e-14!43;CL:0000221!1.11e-13!44;CL:0000133!1.11e-13!44;CL:0000393!4.30e-11!39;CL:0000211!4.30e-11!39;CL:0002321!3.96e-10!70;CL:0000220!3.96e-10!70;CL:0000540!1.62e-08!33;CL:0000047!1.62e-08!33;CL:0000031!1.62e-08!33;CL:0000404!1.62e-08!33;CL:0000333!3.98e-07!10;CL:0000095!3.98e-07!10;CL:0000243!3.98e-07!10;CL:0000123!3.98e-07!10;CL:0000125!3.98e-07!10;CL:0000030!3.98e-07!10;CL:0000339!3.98e-07!10|ontology_enrichment_celltype_v019_2=CL:0002319,6.59e-14,43;CL:0000221,1.11e-13,44;CL:0000133,1.11e-13,44;CL:0000393,4.29e-11,39;CL:0000211,4.29e-11,39;CL:0002321,4.41e-10,70;CL:0000540,1.62e-08,33;CL:0000047,1.62e-08,33;CL:0000031,1.62e-08,33;CL:0000404,1.62e-08,33;CL:0000333,3.97e-07,10;CL:0000095,3.97e-07,10;CL:0000243,3.97e-07,10;CL:0000123,3.97e-07,10;CL:0000125,3.97e-07,10;CL:0000030,3.97e-07,10;CL:0000339,3.97e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.92e-16!75;UBERON:0001016!1.92e-16!75;UBERON:0001017!2.09e-15!73;UBERON:0005743!2.09e-15!73;UBERON:0004121!5.08e-11!102;UBERON:0000924!5.08e-11!102;UBERON:0006601!5.08e-11!102;UBERON:0002020!2.32e-08!34;UBERON:0001049!9.26e-08!52;UBERON:0005068!9.26e-08!52;UBERON:0006241!9.26e-08!52;UBERON:0007135!9.26e-08!52;UBERON:0000955!1.08e-07!50;UBERON:0006238!1.08e-07!50;UBERON:0002616!1.80e-07!49;UBERON:0002791!2.76e-07!29;UBERON:0003528!2.76e-07!29;UBERON:0001893!2.76e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.91e-16,75;UBERON:0001017,2.08e-15,73;UBERON:0004121,5.02e-11,95;UBERON:0000924,5.02e-11,95;UBERON:0006601,5.02e-11,95;UBERON:0000073,1.48e-08,54;UBERON:0002020,2.32e-08,34;UBERON:0001049,9.25e-08,52;UBERON:0005068,9.25e-08,52;UBERON:0006241,9.25e-08,52;UBERON:0007135,9.25e-08,52;UBERON:0003528,2.76e-07,29;UBERON:0002791,2.76e-07,29;UBERON:0001893,2.76e-07,29|phase1_expression=20.8193501236232,24.4282785347553,26.8449551239826,5.44435580352294,3.50627010962443,9.9048770428015,7.94282978024787,0.129123323441576,0.140788722151667,0,0,0.159544317990673,0,0,7.66152452176024,3.03712901084739,2.79824751251259,5.52058789376916,7.40417941470989,4.2438965179803,31.0408009051405,3.47518329203099,1.04479915655574,12.1594241322989,15.8292403936347,20.0981187440257,23.6919097887491,20.0388246397877,6.65081968097309,4.28451220591882,11.9734475753865,0,0,0,0.288851619751275,0.166234645358492,0,184.990980785713,170.331105106188,110.463509978471,168.23420557687,148.903915720941,126.2326917881,41.0423626600382,46.1265037048791,57.8172269309297,28.9484797408774,412.939646184566,231.768922784868,201.234945541883,163.224167615173,205.566167041909,4.86569557567435,0,0.672187598284928,82.0657600954671,78.7966959831581,64.9746836269577,21.2432283902578,26.9785399428737,31.691570175309,68.7854400100338,38.239676232779,91.339821304062,86.0313735433268,81.7052132188015,180.958466753116,195.18289910335,18.7678198278345,16.4707244764663,18.2982716375702,51.9884791614923,51.2415015007743,26.4580126304301,30.8622416678721,17.4651569455904,64.9683697896393,63.7159817045087,68.8157268987971,37.0600468521845,34.2163787073012,38.5475894212002,54.999050803272,56.276261003168,56.2297551818661,36.8285731842085,35.8776635613739,20.1311401491325,59.9751451198818,80.0302821530859,33.3344162006929,11.185510400758,8.15965600449301,0.539703191637817,5.19821133958135,1.34408066129201,13.4826643326482,59.6506129023202,52.4767729297795,52.2942570275304,17.8871143116384,46.1975318691544,61.153257529595,63.9960032837998,30.30874574157,37.2439002248395,26.2872711407687,11.0758363327488,14.7594593678888,30.5790806473539,12.4909435271618,16.1366703505435,17.5267777914604,21.4026149584724,20.9307898701555,31.6679810150782,66.4954463205466,11.2787498397531,41.5766959416441,23.6179600923217,19.8757366614354,21.819386391085,26.0948465705371,30.1564220921894,33.9303665037797,10.7291963187608,24.6819156482196,26.3957201637099,29.3532224538779,48.5321671671626,48.0375632959558,17.591609295801,30.7669046740329,39.1244649715406,49.8691306942944,54.5130643907666,26.9874314203338,22.5176616804268,4.0435641349388,4.8401626853889,13.5325260681212,11.7250073261071,10.6236656585156,13.2620239695429,12.654788842147,12.6832583082001,12.6497328155634,8.53721123438752,15.3053274982318,18.9106080167819,14.7798944297717,18.4124415239163,13.0682207136031,14.9748431604532,23.2533814140976,22.0928036168527,33.004019803722,30.1097051324217,38.362072418405,14.2916783049496,12.4298811789981,15.6653993471083,10.4167683657493,11.8058539048442,15.2724441758504,19.3003174142839,16.901224288176,13.778310399326,21.0636607889255,26.9234641089716,20.9968216723766,18.2749984281665,20.8572609526498,16.7758023450465,34.2772616159527,25.8290577072004,10.2429822724977,12.9580777665137,14.5036010363959,13.23749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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:106572
|HGNC=
|MCL_coexpression_id=176
|TSSclassifier=NA
|UniProt=uniprot:Q3TM43
|association_with_transcript=0bp_to_ENSMUST00000165932_5end
|cluster_id=chr17:66121975..66121990,-
|description=CAGE_peak_1_at_Rab31_5end
|id=chr17:66121975..66121990,-
|ontology_enrichment_celltype=CL:0000055!5.17e-16!50;CL:0002319!6.60e-14!43;CL:0000221!1.11e-13!44;CL:0000133!1.11e-13!44;CL:0000393!4.30e-11!39;CL:0000211!4.30e-11!39;CL:0002321!3.96e-10!70;CL:0000220!3.96e-10!70;CL:0000540!1.62e-08!33;CL:0000047!1.62e-08!33;CL:0000031!1.62e-08!33;CL:0000404!1.62e-08!33;CL:0000333!3.98e-07!10;CL:0000095!3.98e-07!10;CL:0000243!3.98e-07!10;CL:0000123!3.98e-07!10;CL:0000125!3.98e-07!10;CL:0000030!3.98e-07!10;CL:0000339!3.98e-07!10
|ontology_enrichment_celltype_v019_2=CL:0002319,6.59e-14,43;CL:0000221,1.11e-13,44;CL:0000133,1.11e-13,44;CL:0000393,4.29e-11,39;CL:0000211,4.29e-11,39;CL:0002321,4.41e-10,70;CL:0000540,1.62e-08,33;CL:0000047,1.62e-08,33;CL:0000031,1.62e-08,33;CL:0000404,1.62e-08,33;CL:0000333,3.97e-07,10;CL:0000095,3.97e-07,10;CL:0000243,3.97e-07,10;CL:0000123,3.97e-07,10;CL:0000125,3.97e-07,10;CL:0000030,3.97e-07,10;CL:0000339,3.97e-07,10
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.92e-16!75;UBERON:0001016!1.92e-16!75;UBERON:0001017!2.09e-15!73;UBERON:0005743!2.09e-15!73;UBERON:0004121!5.08e-11!102;UBERON:0000924!5.08e-11!102;UBERON:0006601!5.08e-11!102;UBERON:0002020!2.32e-08!34;UBERON:0001049!9.26e-08!52;UBERON:0005068!9.26e-08!52;UBERON:0006241!9.26e-08!52;UBERON:0007135!9.26e-08!52;UBERON:0000955!1.08e-07!50;UBERON:0006238!1.08e-07!50;UBERON:0002616!1.80e-07!49;UBERON:0002791!2.76e-07!29;UBERON:0003528!2.76e-07!29;UBERON:0001893!2.76e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.91e-16,75;UBERON:0001017,2.08e-15,73;UBERON:0004121,5.02e-11,95;UBERON:0000924,5.02e-11,95;UBERON:0006601,5.02e-11,95;UBERON:0000073,1.48e-08,54;UBERON:0002020,2.32e-08,34;UBERON:0001049,9.25e-08,52;UBERON:0005068,9.25e-08,52;UBERON:0006241,9.25e-08,52;UBERON:0007135,9.25e-08,52;UBERON:0003528,2.76e-07,29;UBERON:0002791,2.76e-07,29;UBERON:0001893,2.76e-07,29
|phase1_expression=20.8193501236232,24.4282785347553,26.8449551239826,5.44435580352294,3.50627010962443,9.9048770428015,7.94282978024787,0.129123323441576,0.140788722151667,0,0,0.159544317990673,0,0,7.66152452176024,3.03712901084739,2.79824751251259,5.52058789376916,7.40417941470989,4.2438965179803,31.0408009051405,3.47518329203099,1.04479915655574,12.1594241322989,15.8292403936347,20.0981187440257,23.6919097887491,20.0388246397877,6.65081968097309,4.28451220591882,11.9734475753865,0,0,0,0.288851619751275,0.166234645358492,0,184.990980785713,170.331105106188,110.463509978471,168.23420557687,148.903915720941,126.2326917881,41.0423626600382,46.1265037048791,57.8172269309297,28.9484797408774,412.939646184566,231.768922784868,201.234945541883,163.224167615173,205.566167041909,4.86569557567435,0,0.672187598284928,82.0657600954671,78.7966959831581,64.9746836269577,21.2432283902578,26.9785399428737,31.691570175309,68.7854400100338,38.239676232779,91.339821304062,86.0313735433268,81.7052132188015,180.958466753116,195.18289910335,18.7678198278345,16.4707244764663,18.2982716375702,51.9884791614923,51.2415015007743,26.4580126304301,30.8622416678721,17.4651569455904,64.9683697896393,63.7159817045087,68.8157268987971,37.0600468521845,34.2163787073012,38.5475894212002,54.999050803272,56.276261003168,56.2297551818661,36.8285731842085,35.8776635613739,20.1311401491325,59.9751451198818,80.0302821530859,33.3344162006929,11.185510400758,8.15965600449301,0.539703191637817,5.19821133958135,1.34408066129201,13.4826643326482,59.6506129023202,52.4767729297795,52.2942570275304,17.8871143116384,46.1975318691544,61.153257529595,63.9960032837998,30.30874574157,37.2439002248395,26.2872711407687,11.0758363327488,14.7594593678888,30.5790806473539,12.4909435271618,16.1366703505435,17.5267777914604,21.4026149584724,20.9307898701555,31.6679810150782,66.4954463205466,11.2787498397531,41.5766959416441,23.6179600923217,19.8757366614354,21.819386391085,26.0948465705371,30.1564220921894,33.9303665037797,10.7291963187608,24.6819156482196,26.3957201637099,29.3532224538779,48.5321671671626,48.0375632959558,17.591609295801,30.7669046740329,39.1244649715406,49.8691306942944,54.5130643907666,26.9874314203338,22.5176616804268,4.0435641349388,4.8401626853889,13.5325260681212,11.7250073261071,10.6236656585156,13.2620239695429,12.654788842147,12.6832583082001,12.6497328155634,8.53721123438752,15.3053274982318,18.9106080167819,14.7798944297717,18.4124415239163,13.0682207136031,14.9748431604532,23.2533814140976,22.0928036168527,33.004019803722,30.1097051324217,38.362072418405,14.2916783049496,12.4298811789981,15.6653993471083,10.4167683657493,11.8058539048442,15.2724441758504,19.3003174142839,16.901224288176,13.778310399326,21.0636607889255,26.9234641089716,20.9968216723766,18.2749984281665,20.8572609526498,16.7758023450465,34.2772616159527,25.8290577072004,10.2429822724977,12.9580777665137,14.5036010363959,13.237490296045,11.5980715189884,9.68080918192044,10.8965241483986,19.2127882373685,14.2358718463353,19.2697777027093,17.8447998248191,18.9008648439093,17.1568396664826,11.6846523125049,11.6714546932335,9.75792238946399,14.9837641752935,12.3388393618507,12.3978509240388,11.6081256871829,12.8008641530633,16.4117818543345,18.7812515259044,15.941895981797,18.9968460688064,14.1906738510071,6.22550516883013,2.66952169145751,4.91397487783007,4.49724224769707,6.08580364165509,6.75296047306767,8.91190481234969,5.4662266115654,8.59316701907687,8.78596522201861,14.3768206527355,10.7920874823866,11.5453939052387,10.8608917517258,5.9201146462231,6.27176577772377,32.3318082791558,17.4332098828846,13.2001630918041,16.1257831486429,10.5610611729826,12.2279567932526,11.1880511216426,18.7328301943487,26.9556096421587,31.0050565508285,39.0664183210843,33.5919795167263,37.8180110286311,40.5017364028232,108.569724436276,72.3394559478884,3.44234991113325,8.82997588175144,62.9358312752144,70.2098002687297,34.2624035837252,19.6927323219411,51.1123315454336,51.5379142471563,49.5473814785438,71.6906393857656,55.0312724983513,54.3506939114558,65.5793336713329,51.4370309923909,43.4816555741176,36.9519513885078,41.3045647956062,24.5730533060812,30.6227483584723,35.6335465620677,0,11.4106898992841,5.13950046840077,6.60117779145643,9.44966057218473,9.53048958626175,16.5394107627662,15.6319503675327,13.5469003786194,11.6933600436252,6.32511651449993,4.12542172992747,2.7235168460303,13.8647042404109,11.7716402242307,13.5032332069903,8.86701168211368,9.81028496811388,11.1893334009442,9.74287837166718,66.41209338203,65.8797740386481,13.4522322813527,15.8290802823821,25.1884505645613,19.5413876767225,20.7707878565457,22.1590214655833,16.3229268512716,70.4616147639937,14.5240248678175,26.004745363366,19.8158144285592,10.360265135258,7.79157098009843,10.066239621087,22.6071311891828,29.3898049879682,22.9411956515344,15.2747298882418,12.4952717464548,13.6224042974989,11.4485661271109,10.245326504709,15.0670168984863,14.5653494095606,17.1919187908699,22.2492550686425,13.73918716893,4.34937519160848,40.0221986465775,36.7810703268188,33.7535320532479,37.9179817270893,40.4270247485298,38.859908862879,41.6618197192427,79.8152879093414,117.652184445648,52.1821700984173,36.5798107947489,3.47612232690996,12.1635129174099,8.01145465885653,2.85825810551149,2.68540043501222,3.17890167650024,1.9231271923195,2.36303243479324,1.31256384932592,1.600342939755,1.41156659191577,2.33898913775406,2.50150788264857,2.10378423926824,17.2315091547561,25.9723565447656,31.8484190963639,30.2192309455341,19.1257698091869,105.102186252662,38.8281443446602,59.5944093839803,4.01257683228291,51.9571695207701,55.6993536173684,53.2792827498639,60.3204670026343,43.8452812653211,46.8344216381614,41.1763725141402,36.4760174611619,30.3605414019417,40.9030646283938,15.1529527472898,16.3600198094423,12.4635532200518,11.1829089851415,16.5594398476106,17.0974462858513,16.4462578573195,20.6035057238894,19.8969909946925,13.6456494352451,12.4204856946217,17.9195024316772,15.0762827026511,16.0062881012173,16.3116731833942,15.7176918123414,16.9191115879489,18.326375944052,13.5988347265091,15.3086876939773,13.3719008430312,16.1502983604997,20.9823847153642,15.4067201630268,18.3513291809895,15.3998586362851,14.2683818840763,18.1518100892112,14.1236278399696,14.0285567914435,17.0834426098811,15.4652037329635,22.9169384175026,17.0430525304563,17.747408210265,20.4844673909116,18.4805970671873,19.5532659183951,20.8504281955039,25.1474217796248,27.3604046032097
|short_description=p1@Rab31
}}

Revision as of 05:49, 5 August 2015

Short description:p1@Rab31
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rab31_5end
Coexpression cluster:MCL_coexpression_mm9:176
Association with transcript: 0bp_to_ENSMUST00000165932_5end
EntrezGene:106572
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Rab31

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G720.82
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I524.43
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I626.84
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I79.90
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I87.94
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.80
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A25.52
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.40
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.24
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A331.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.48
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D112.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D215.83
GP2+ M cell, pool1.CNhs13228.11845-124H920.10
GP2+ M cell, pool2.CNhs13231.11846-124I123.69
GP2+ M cell, pool3.CNhs13240.11847-124I220.04
Ileum epithelium, pool1.CNhs13199.10252-104B96.65
Ileum epithelium, pool2.CNhs13232.10253-104C14.28
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C811.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8184.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1170.33
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3110.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9168.23
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2148.90
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4126.23
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D841.04
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D946.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B357.82
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B728.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C2412.94
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8231.77
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3201.23
Mouse Astrocytes, donor2.CNhs12078.11552-120C4163.22
Mouse Astrocytes, donor3.CNhs12107.11633-122C4205.57
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.87
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C182.07
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E178.80
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C564.97
Mouse Granule cells, donor1.CNhs12131.11713-123C321.24
Mouse Granule cells, donor2.CNhs12357.11731-123E326.98
Mouse Granule cells, donor3.CNhs12108.11636-122C731.69
Mouse Meningeal cells, donor1.CNhs12132.11716-123C668.79
Mouse Meningeal cells, donor3.CNhs12109.11639-122D138.24
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C791.34
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E786.03
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D281.71
Mouse Microglia, donor1.CNhs12629.11718-123C8180.96
Mouse Microglia, donor2.CNhs12634.11736-123E8195.18
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D518.77
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.47
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.30
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F151.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D551.24
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D226.46
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F230.86
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D617.47
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D364.97
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F363.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D768.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D437.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F434.22
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D838.55
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E455.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E556.28
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I656.23
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D636.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F635.88
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E120.13
Mouse Schwann, donor1.CNhs12507.11728-123D959.98
Mouse Schwann, donor2.CNhs12573.11746-123F980.03
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G333.33
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F711.19
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I759.65
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E352.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I852.29
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H146.20
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I861.15
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B664.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G130.31
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G237.24
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G326.29
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.08
accessory axillary lymph node, adult.CNhs10475.1063-29H914.76
adrenal gland, adult.CNhs10508.49-24D730.58
adrenal gland, embryo E14.CNhs11038.406-44C512.49
adrenal gland, embryo E16.CNhs11004.1254-43D616.14
adrenal gland, embryo E17.CNhs11043.1263-45I117.53
adrenal gland, embryo E18.CNhs11026.1262-18F521.40
adrenal gland, neonate N00.CNhs11191.1311-23C120.93
adrenal gland, neonate N25.CNhs11223.1377-27I331.67
amnion, adult pregnant day17.5.CNhs10488.583-22A866.50
aorta, adult.CNhs10498.46-23H111.28
bone (os femoris), adult.CNhs10483.56-12G241.58
bone (os femoris), neonate N02.CNhs11227.1985-43F523.62
bone (os femoris), neonate N16.CNhs11225.1525-43A619.88
bone (os femoris), neonate N20.CNhs11195.1350-25C321.82
cecum, adult.CNhs10467.37-13H426.09
cerebellum, adult.CNhs10494.15-8B230.16
cerebellum, neonate N30.CNhs11135.1395-42I233.93
colon, adult.CNhs10468.36-18H710.73
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C724.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D126.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D429.35
corpora quadrigemina, adult.CNhs10501.16-22A448.53
corpus striatum, adult.CNhs10487.19-21D848.04
corpus striatum, neonate N00.CNhs11226.630-43F117.59
cortex, adult.CNhs10473.12-14D530.77
cortex, neonate N30.CNhs11107.1392-42F239.12
diencephalon, adult.CNhs10482.20-12F249.87
diencephalon, neonate N30.CNhs11201.1388-42B254.51
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B126.99
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A222.52
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G44.84
eyeball, embryo E12.CNhs11016.345-16C613.53
eyeball, embryo E14.CNhs10521.399-16E211.73
eyeball, embryo E15.CNhs10593.426-16C910.62
eyeball, embryo E17.CNhs11023.1261-18D413.26
eyeball, neonate N00.CNhs11207.633-15C612.65
eyeball, neonate N01.CNhs11140.1532-43E712.68
eyeball, neonate N02.CNhs11205.1551-44G812.65
eyeball, neonate N16.CNhs11188.777-19A28.54
forelimb, embryo E11.CNhs10596.335-25E215.31
forelimb, embryo E12.CNhs10600.359-14H218.91
forelimb, embryo E13.CNhs10589.384-1E214.78
forelimb, embryo E14.CNhs10577.413-26A818.41
forelimb, embryo E15.CNhs11007.437-20E713.07
forelimb, embryo E17.CNhs10598.1517-43C414.97
forelimb, embryo E18.CNhs11008.1520-43B523.25
gonad, embryo E13.CNhs11044.1564-45I622.09
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C833.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D230.11
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D538.36
heart, embryo E11.CNhs10586.331-24E914.29
heart, embryo E12.CNhs11015.353-12F512.43
heart, embryo E13.CNhs11013.376-3I915.67
heart, embryo E14.CNhs10597.403-26D410.42
heart, embryo E15.CNhs11017.431-16C811.81
heart, embryo E16.CNhs11021.457-17C615.27
heart, embryo E17.CNhs11025.479-18E519.30
heart, embryo E18.CNhs11030.1283-20G316.90
heart, neonate N00.CNhs11213.639-21E313.78
heart, neonate N03.CNhs11221.1349-25I221.06
heart, neonate N10.CNhs11118.749-24G126.92
heart, neonate N16.CNhs11209.782-15G121.00
heart, neonate N20.CNhs11127.821-26I618.27
heart, neonate N25.CNhs11196.1351-25D320.86
heart, neonate N30.CNhs11202.1390-42D216.78
hippocampus, adult.CNhs10478.13-16E834.28
hippocampus, neonate N00.CNhs11228.627-43G125.83
intestinal mucosa, adult.CNhs10506.860-29I310.24
intestine, adult.CNhs10496.178-9A312.96
intestine, embryo E12.CNhs11019.1251-16I514.50
intestine, embryo E13.CNhs11010.381-16D513.24
intestine, embryo E15.CNhs10602.976-16D811.60
intestine, embryo E16.CNhs10585.463-22H49.68
intestine, embryo E17.CNhs10582.482-18D310.90
intestine, embryo E18.CNhs10526.1289-20F719.21
intestine, neonate N00.CNhs11126.644-26D114.24
intestine, neonate N01.CNhs11192.1322-23E919.27
intestine, neonate N06.CNhs11102.688-20B817.84
intestine, neonate N07.CNhs11095.720-20F218.90
intestine, neonate N10.CNhs11098.755-23A517.16
intestine, neonate N20.CNhs11187.827-18D111.68
intestine, neonate N25.CNhs11121.1352-25E311.67
intestine, neonate N30.CNhs11131.1384-42G19.76
kidney, embryo E14.CNhs10606.411-4I914.98
kidney, embryo E15.CNhs10997.434-16F812.34
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I211.61
kidney, embryo E18.CNhs11001.1288-20C712.80
kidney, neonate N00.CNhs11214.646-21G716.41
kidney, neonate N10.CNhs11206.758-6D518.78
kidney, neonate N20.CNhs11113.832-19I115.94
kidney, neonate N25.CNhs11122.1353-25F319.00
kidney, neonate N30.CNhs11203.1385-42H114.19
liver, adult pregnant day01.CNhs10466.508-5B26.23
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H64.91
liver, embryo E14.CNhs10594.409-16E14.50
liver, embryo E15.CNhs10520.433-16D76.09
liver, embryo E16.CNhs10523.462-17F56.75
liver, embryo E17.CNhs10510.481-18A38.91
liver, embryo E18.CNhs10579.499-43G45.47
liver, neonate N00.CNhs11117.641-24F48.59
liver, neonate N03.CNhs11123.1345-25G28.79
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H210.79
liver, neonate N10.CNhs11115.751-24B911.55
liver, neonate N20.CNhs11220.823-25A310.86
liver, neonate N25.CNhs11198.1368-26H15.92
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B132.33
lung, embryo E12.CNhs10522.354-16G217.43
lung, embryo E14.CNhs10604.404-26F813.20
lung, embryo E15.CNhs11020.432-17C516.13
lung, embryo E16.CNhs10998.458-17B610.56
lung, embryo E17.CNhs10605.480-44A612.23
lung, embryo E18.CNhs10583.1287-20I611.19
lung, neonate N00.CNhs11224.640-42C618.73
lung, neonate N06.CNhs11212.683-20E526.96
lung, neonate N07.CNhs11111.715-19A331.01
lung, neonate N10.CNhs11219.750-23E639.07
lung, neonate N20.CNhs11109.822-18A433.59
lung, neonate N25.CNhs11119.1359-25C737.82
lung, neonate N30.CNhs11133.1394-42H240.50
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1108.57
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A172.34
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H28.83
medulla oblongata, adult.CNhs10477.17-12C262.94
medulla oblongata, neonate N30.CNhs11200.1396-42A370.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C734.26
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C219.69
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E151.11
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E251.54
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E349.55
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D771.69
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D855.03
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D954.35
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D465.58
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D551.44
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D643.48
olfactory brain, adult.CNhs10489.18-22I936.95
ovary, adult.CNhs10507.91-2I741.30
ovary, embryo E18.CNhs11040.505-44H724.57
ovary, neonate N00.CNhs11217.1299-22I430.62
oviduct, adult pregnant day01.CNhs10500.988-6G635.63
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F411.41
pancreas, embryo E15.CNhs11042.1556-45F25.14
pancreas, embryo E16.CNhs11003.460-26E56.60
pancreas, embryo E17.CNhs10599.1558-45G39.45
pancreas, embryo E18.CNhs10580.1535-43I79.53
pancreas, neonate N00.CNhs11105.645-26G916.54
pancreas, neonate N01.CNhs11138.1531-43D715.63
pancreas, neonate N02.CNhs11139.1539-43D813.55
pancreas, neonate N16.CNhs11136.787-43B611.69
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E613.86
pituitary gland, embryo E13.CNhs11009.370-44C711.77
pituitary gland, embryo E14.CNhs11037.398-44A513.50
pituitary gland, embryo E15.CNhs10592.427-16B98.87
pituitary gland, embryo E16.CNhs11036.449-43F69.81
pituitary gland, embryo E17.CNhs11039.1265-44F511.19
pituitary gland, neonate N00.CNhs11190.1308-22E99.74
placenta, adult pregnant day10.CNhs10472.539-13I766.41
placenta, adult pregnant day17.CNhs10464.577-18G365.88
prostate, adult.CNhs10470.859-1F813.45
skin, adult.CNhs10492.30-1C315.83
skin, neonate N00.CNhs11124.650-25G425.19
skin, neonate N03.CNhs11215.662-22H319.54
skin, neonate N06.CNhs11097.693-20I520.77
skin, neonate N10.CNhs11108.762-6C422.16
small intestine, neonate N16.CNhs11114.790-21I116.32
spinal cord, adult.CNhs10505.24-13C970.46
spleen, adult.CNhs10465.25-2G214.52
spleen, embryo E16.CNhs11035.461-43C126.00
spleen, embryo E18.CNhs11011.1271-21F219.82
spleen, neonate N10.CNhs11116.752-24D110.36
spleen, neonate N20.CNhs11112.824-19H17.79
spleen, neonate N25.CNhs11099.1354-25G310.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C622.61
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C929.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D322.94
stomach, adult.CNhs10503.33-1H615.27
stomach, embryo E12.CNhs10588.356-43E312.50
stomach, embryo E15.CNhs10603.1252-16G813.62
stomach, embryo E16.CNhs11022.459-17D411.45
stomach, embryo E17.CNhs11006.1035-18D510.25
stomach, embryo E18.CNhs10999.1286-20C615.07
stomach, neonate N03.CNhs11193.1340-24B814.57
stomach, neonate N07.CNhs11210.718-18A917.19
stomach, neonate N25.CNhs11104.1355-25E422.25
stomach, neonate N30.CNhs11134.1386-42I113.74
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G540.02
testis, embryo E13.CNhs11031.389-23F536.78
testis, embryo E15.CNhs11034.443-27C533.75
testis, embryo E16.CNhs11033.470-26G537.92
testis, embryo E17.CNhs11029.486-18I540.43
testis, embryo E18.CNhs11027.503-18G538.86
testis, neonate N00.CNhs11189.1300-22B741.66
testis, neonate N07.CNhs11222.726-26I479.82
testis, neonate N10.CNhs11204.763-44D9117.65
testis, neonate N20.CNhs11110.839-18H352.18
testis, neonate N30.CNhs11130.1391-42E236.58
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I412.16
thymus, embryo E15.CNhs11005.430-45I28.01
thymus, embryo E16.CNhs11002.456-26C52.86
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F81.92
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D31.60
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A22.34
thymus, neonate N25.CNhs11125.1362-25G72.50
thymus, neonate N30.CNhs11132.1393-42G22.10
tongue, adult.CNhs10499.32-1B417.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H325.97
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F731.85
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G530.22
urinary bladder, adult.CNhs10481.879-12E419.13
uterus, adult pregnant day19.CNhs10497.590-15F5105.10
uterus, adult.CNhs10509.92-27E538.83
vagina, adult.CNhs10502.89-27D559.59
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A151.96
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A255.70
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A353.28
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D760.32
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A443.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A546.83
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A641.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A736.48
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A830.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A940.90
whole body, embryo E11.CNhs11014.324-5I815.15
whole body, embryo E12.CNhs10587.857-27C916.36
whole body, embryo E13.CNhs10512.372-23H212.46
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B116.56
whole body, embryo E16.CNhs10514.453-14F217.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.90
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.65
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G512.42
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G517.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.08
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.01
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.31
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G515.72
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.92
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.31
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G516.15
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G520.98
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G515.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.40
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.27
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G518.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G515.47
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G522.92
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.04
whole body, embryo E17.5.CNhs10513.490-9F917.75
whole body, embryo E17.CNhs10517.475-3I520.48
whole body, embryo E18.CNhs10516.493-3B318.48
whole body, neonate N00.CNhs10525.657-19C219.55
whole body, neonate N01.CNhs10576.659-23C620.85
whole body, neonate N06.CNhs10515.692-21D125.15
whole body, neonate N10.CNhs10518.761-6B427.36





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system1.91e-1675
central nervous system2.08e-1573
ectoderm-derived structure5.02e-1195
ectoderm5.02e-1195
presumptive ectoderm5.02e-1195
regional part of nervous system1.48e-0854
gray matter2.32e-0834
neural tube9.25e-0852
neural rod9.25e-0852
future spinal cord9.25e-0852
neural keel9.25e-0852
brain grey matter2.76e-0729
regional part of telencephalon2.76e-0729
telencephalon2.76e-0729
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