FFCP PHASE1:Mm9::chr17:66450806..66450874,-: Difference between revisions
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{{FFCP|EntrezGene=72900|HGNC=|MCL_coexpression_id=79|UniProt=F8WH34,D6RGN4,Q9D6J6|association_with_transcript=0bp_to_ENSMUST00000024909,ENSMUST00000147484,NM_028388,uc008dgw.1,uc008dgx.1_5end|description=CAGE_peak_1_at_Ndufv2_5end|id=chr17:66450806..66450874,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!7.37e-08!18;UBERON:0000948!7.37e-08!18;UBERON:0005498!7.37e-08!18;UBERON:0004140!7.37e-08!18;UBERON:0009881!7.37e-08!18;UBERON:0004141!7.37e-08!18;UBERON:0003084!7.37e-08!18;UBERON:0007005!7.37e-08!18;UBERON:0004139!7.37e-08!18;UBERON:0004291!7.37e-08!18;UBERON:0003914!2.56e-07!47;UBERON:0003103!3.73e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,7.37e-08,18;UBERON:0000948,7.37e-08,18;UBERON:0005498,7.37e-08,18;UBERON:0004140,7.37e-08,18;UBERON:0009881,7.37e-08,18;UBERON:0004141,7.37e-08,18;UBERON:0003084,7.37e-08,18;UBERON:0007005,7.37e-08,18;UBERON:0004139,7.37e-08,18;UBERON:0004291,7.37e-08,18;UBERON:0003914,2.56e-07,47;UBERON:0003103,3.73e-07,43|phase1_expression=135.64607349776,242.537908309356,231.594612849274,171.497207810973,153.274093363582,146.390725107168,145.073449809821,76.8283774477379,53.640503139785,44.0041309485348,89.5469973819391,77.059905589495,73.1027116806249,70.5482647521309,134.243234011712,112.171298133964,141.311499381886,75.2377264379397,73.2191075454645,72.5706304574632,241.097727578283,131.26263748757,150.712278333166,220.149573763728,214.956496359938,295.729461519235,291.625871399694,273.432994278393,264.322576463816,254.80246118729,246.120866827388,87.6342329374291,68.8872562094719,15.8481681015439,231.947850660274,300.884708098871,245.819904939892,90.821363869909,149.235050804046,129.833888505502,85.2935657644971,93.5772314393071,91.2759463698569,113.181239360044,113.947670690734,129.400460273985,118.141092996554,166.789244631042,155.537817376006,154.377339864981,154.125050209524,166.752974663367,61.743999029247,47.8739013727487,54.1111016619367,112.679632983745,127.220847332808,172.750150912943,181.882498312778,141.769582444905,163.528502104594,127.744388590063,121.833387067226,96.7392196077504,81.0870417304919,73.1794518394483,112.949241665439,71.8488230951307,147.965076764198,146.751454966548,157.533396052185,257.657187932231,248.256240029614,161.075400967665,136.483950729969,216.935633639965,186.095838888967,239.030696895471,241.008650679046,167.891244280537,147.020643269072,173.985065765958,326.644108831616,252.680411904224,240.810038496253,181.785837237253,214.838866325846,210.817773228415,129.870421566411,125.29764665705,75.9444960398396,227.151903523086,230.510282126927,323.82191498269,409.359142992032,415.768951226327,322.741277462766,137.537270320493,176.914269134554,156.882771082591,159.998124866309,128.326477414318,73.8935195149272,113.770672504533,104.781663849428,96.5301087460126,130.930831258829,266.04843974541,65.5112845627344,118.902153390925,120.051846122166,101.082538799631,130.758986944185,126.154850142545,108.651965393391,251.081849476692,61.7987419335935,454.909576870042,147.729962175629,284.547889057493,306.086344586105,226.921618467284,208.758772564297,149.025425678877,149.544948664807,198.745588952284,108.67231792687,170.972278333121,134.694440697449,217.496008415803,158.295208575245,173.026042859414,174.519617473046,157.776437172814,205.710164113964,217.07880998466,110.393870413743,152.522945967974,168.566079875261,140.575159732165,116.067435122732,111.042716441367,108.757526402431,111.672270016265,97.6323762821555,111.20270920725,127.434345401231,123.918914583989,105.628316537093,102.873707611294,104.339016629222,103.02199424096,88.6970725029657,101.689632624473,94.0424363384302,105.488161413801,165.02009901861,148.747090312305,134.12517171472,216.032180754528,219.985444262268,269.372843945678,225.854477748291,306.16514459896,390.758596943729,478.322324351589,512.670470074672,548.680343783329,727.025416917757,681.130808464166,770.477965923813,856.293326350171,864.588354016157,853.955442572245,172.858337719713,152.40173093372,217.745977986323,230.336443563947,119.654708550266,108.918999102546,116.109582651206,158.523250353947,175.233898549758,166.257197222377,238.213588895345,183.639334517272,172.918623654585,166.526567098443,149.927382994603,198.639089312583,227.593366518053,228.415040422759,139.405907200515,127.615588585067,121.724354526927,154.164055178903,168.350758861499,184.316934671757,225.248545236604,298.172498918796,395.793792888106,390.922215304264,245.166322601072,126.802280344231,114.004217165658,136.266440105221,133.279099752246,129.512134787048,147.173742329661,162.260621522257,193.265190315842,213.883340873515,87.6986059816863,174.534104456528,193.151319657913,275.563555840299,318.609806414916,283.194347040297,82.0304164339725,126.769754474454,106.416129616643,114.577932898252,99.7433555226134,98.3261731183458,91.8848453820013,103.225699716776,90.6402078610598,92.1293108938904,100.615959022874,95.53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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72900 | |||
|HGNC= | |||
|MCL_coexpression_id=79 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F8WH34,uniprot:D6RGN4,uniprot:Q9D6J6 | |||
|association_with_transcript=0bp_to_ENSMUST00000024909,ENSMUST00000147484,NM_028388,uc008dgw.1,uc008dgx.1_5end | |||
|cluster_id=chr17:66450806..66450874,- | |||
|description=CAGE_peak_1_at_Ndufv2_5end | |||
|id=chr17:66450806..66450874,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!7.37e-08!18;UBERON:0000948!7.37e-08!18;UBERON:0005498!7.37e-08!18;UBERON:0004140!7.37e-08!18;UBERON:0009881!7.37e-08!18;UBERON:0004141!7.37e-08!18;UBERON:0003084!7.37e-08!18;UBERON:0007005!7.37e-08!18;UBERON:0004139!7.37e-08!18;UBERON:0004291!7.37e-08!18;UBERON:0003914!2.56e-07!47;UBERON:0003103!3.73e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,7.37e-08,18;UBERON:0000948,7.37e-08,18;UBERON:0005498,7.37e-08,18;UBERON:0004140,7.37e-08,18;UBERON:0009881,7.37e-08,18;UBERON:0004141,7.37e-08,18;UBERON:0003084,7.37e-08,18;UBERON:0007005,7.37e-08,18;UBERON:0004139,7.37e-08,18;UBERON:0004291,7.37e-08,18;UBERON:0003914,2.56e-07,47;UBERON:0003103,3.73e-07,43 | |||
|phase1_expression=135.64607349776,242.537908309356,231.594612849274,171.497207810973,153.274093363582,146.390725107168,145.073449809821,76.8283774477379,53.640503139785,44.0041309485348,89.5469973819391,77.059905589495,73.1027116806249,70.5482647521309,134.243234011712,112.171298133964,141.311499381886,75.2377264379397,73.2191075454645,72.5706304574632,241.097727578283,131.26263748757,150.712278333166,220.149573763728,214.956496359938,295.729461519235,291.625871399694,273.432994278393,264.322576463816,254.80246118729,246.120866827388,87.6342329374291,68.8872562094719,15.8481681015439,231.947850660274,300.884708098871,245.819904939892,90.821363869909,149.235050804046,129.833888505502,85.2935657644971,93.5772314393071,91.2759463698569,113.181239360044,113.947670690734,129.400460273985,118.141092996554,166.789244631042,155.537817376006,154.377339864981,154.125050209524,166.752974663367,61.743999029247,47.8739013727487,54.1111016619367,112.679632983745,127.220847332808,172.750150912943,181.882498312778,141.769582444905,163.528502104594,127.744388590063,121.833387067226,96.7392196077504,81.0870417304919,73.1794518394483,112.949241665439,71.8488230951307,147.965076764198,146.751454966548,157.533396052185,257.657187932231,248.256240029614,161.075400967665,136.483950729969,216.935633639965,186.095838888967,239.030696895471,241.008650679046,167.891244280537,147.020643269072,173.985065765958,326.644108831616,252.680411904224,240.810038496253,181.785837237253,214.838866325846,210.817773228415,129.870421566411,125.29764665705,75.9444960398396,227.151903523086,230.510282126927,323.82191498269,409.359142992032,415.768951226327,322.741277462766,137.537270320493,176.914269134554,156.882771082591,159.998124866309,128.326477414318,73.8935195149272,113.770672504533,104.781663849428,96.5301087460126,130.930831258829,266.04843974541,65.5112845627344,118.902153390925,120.051846122166,101.082538799631,130.758986944185,126.154850142545,108.651965393391,251.081849476692,61.7987419335935,454.909576870042,147.729962175629,284.547889057493,306.086344586105,226.921618467284,208.758772564297,149.025425678877,149.544948664807,198.745588952284,108.67231792687,170.972278333121,134.694440697449,217.496008415803,158.295208575245,173.026042859414,174.519617473046,157.776437172814,205.710164113964,217.07880998466,110.393870413743,152.522945967974,168.566079875261,140.575159732165,116.067435122732,111.042716441367,108.757526402431,111.672270016265,97.6323762821555,111.20270920725,127.434345401231,123.918914583989,105.628316537093,102.873707611294,104.339016629222,103.02199424096,88.6970725029657,101.689632624473,94.0424363384302,105.488161413801,165.02009901861,148.747090312305,134.12517171472,216.032180754528,219.985444262268,269.372843945678,225.854477748291,306.16514459896,390.758596943729,478.322324351589,512.670470074672,548.680343783329,727.025416917757,681.130808464166,770.477965923813,856.293326350171,864.588354016157,853.955442572245,172.858337719713,152.40173093372,217.745977986323,230.336443563947,119.654708550266,108.918999102546,116.109582651206,158.523250353947,175.233898549758,166.257197222377,238.213588895345,183.639334517272,172.918623654585,166.526567098443,149.927382994603,198.639089312583,227.593366518053,228.415040422759,139.405907200515,127.615588585067,121.724354526927,154.164055178903,168.350758861499,184.316934671757,225.248545236604,298.172498918796,395.793792888106,390.922215304264,245.166322601072,126.802280344231,114.004217165658,136.266440105221,133.279099752246,129.512134787048,147.173742329661,162.260621522257,193.265190315842,213.883340873515,87.6986059816863,174.534104456528,193.151319657913,275.563555840299,318.609806414916,283.194347040297,82.0304164339725,126.769754474454,106.416129616643,114.577932898252,99.7433555226134,98.3261731183458,91.8848453820013,103.225699716776,90.6402078610598,92.1293108938904,100.615959022874,95.5323124792752,96.7035898449015,90.4056616134447,125.156765669596,208.315876902566,174.084552648739,114.237812970159,229.105691912579,270.290149281621,132.459435864354,625.118015758028,162.802241218788,156.956375207249,139.594361730854,131.432838873904,117.637699915504,125.402903139453,129.944235237641,128.300321623066,113.842880048599,159.375372945216,101.771041094329,82.9785713089409,101.967236555339,89.2488365281417,114.160818972368,134.743253066015,143.301366001292,182.946927363221,126.979813938732,127.278151248786,104.405030439961,117.421394621234,142.955448732273,146.641055682219,144.423493747748,150.577893142353,86.1312202557084,119.380505342759,103.228229658638,116.385010022155,104.808078082584,104.167389479609,107.121412411981,95.9064589710988,90.1139358964648,80.4961869282517,116.659522571075,91.8416428884044,105.113341779034,124.485877051714,101.347120058663,88.9643676618232,194.126237195481,214.53707442616,88.6819871340855,119.085222814779,92.0416801027467,106.616546664655,97.873067048254,94.4853855342939,79.2099483771366,80.0522307291324,81.2615845970012,284.491844168504,108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| |||
|short_description=p1@Ndufv2 | |||
}} |
Revision as of 05:59, 5 August 2015
Short description: | p1@Ndufv2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ndufv2_5end |
Coexpression cluster: | MCL_coexpression_mm9:79 |
Association with transcript: | 0bp_to_ENSMUST00000024909, ENSMUST00000147484, NM_028388, uc008dgw.1, uc008dgx.1_5end |
EntrezGene: | 72900 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 7.37e-08 | 18 |
heart | 7.37e-08 | 18 |
primitive heart tube | 7.37e-08 | 18 |
primary heart field | 7.37e-08 | 18 |
anterior lateral plate mesoderm | 7.37e-08 | 18 |
heart tube | 7.37e-08 | 18 |
heart primordium | 7.37e-08 | 18 |
cardiac mesoderm | 7.37e-08 | 18 |
cardiogenic plate | 7.37e-08 | 18 |
heart rudiment | 7.37e-08 | 18 |
epithelial tube | 2.56e-07 | 47 |
compound organ | 3.73e-07 | 43 |