FFCP PHASE1:Mm9::chr12:82612045..82612070,-: Difference between revisions
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{{FFCP|EntrezGene=24071|HGNC=|MCL_coexpression_id=12|UniProt=Q9D6K5|association_with_transcript=346bp_to_ENSMUST00000114201_5end|description=CAGE_peak_2_at_Synj2bp_5end|id=chr12:82612045..82612070,-|ontology_enrichment_celltype=CL:0000239!7.90e-14!6;CL:0000677!7.90e-14!6;CL:0000212!7.90e-14!6;CL:0000584!7.90e-14!6;CL:0002563!6.79e-12!9;CL:0002251!6.79e-12!9;CL:0000075!9.77e-12!7;CL:0000473!6.22e-08!3;CL:0000627!6.22e-08!3;CL:0000682!6.22e-08!3;CL:0000066!1.69e-07!25|ontology_enrichment_celltype_v019_2=CL:0000682,4.27e-12,3;CL:0000239,7.72e-11,6;CL:0000677,7.72e-11,6;CL:0000584,7.72e-11,6;CL:0000075,2.67e-09,7;CL:0002563,3.05e-07,9;CL:0002251,3.05e-07,9;CL:0000066,7.60e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.90e-25!43;UBERON:0000344!3.72e-24!15;UBERON:0001242!2.74e-20!13;UBERON:0000060!2.74e-20!13;UBERON:0001262!2.74e-20!13;UBERON:0004786!2.74e-20!13;UBERON:0005409!6.61e-17!59;UBERON:0004923!6.72e-14!24;UBERON:0003350!6.79e-12!9;UBERON:0004808!6.79e-12!9;UBERON:0001277!6.79e-12!9;UBERON:0000485!1.60e-09!11;UBERON:0000331!5.05e-08!3;UBERON:0002116!5.05e-08!3;UBERON:0001204!5.05e-08!3;UBERON:0001168!5.05e-08!3;UBERON:0001007!2.07e-07!128;UBERON:0001555!2.07e-07!128;UBERON:0007026!2.07e-07!128;UBERON:0004119!3.38e-07!130;UBERON:0000925!3.38e-07!130;UBERON:0006595!3.38e-07!130|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.02e-29,31;UBERON:0000344,3.27e-24,15;UBERON:0001242,1.80e-18,13;UBERON:0001262,1.80e-18,13;UBERON:0004786,1.80e-18,13;UBERON:0005409,5.27e-18,47;UBERON:0002108,2.66e-15,4;UBERON:0004923,1.68e-14,24;UBERON:0000331,3.02e-12,3;UBERON:0002116,3.02e-12,3;UBERON:0001204,3.02e-12,3;UBERON:0001168,3.02e-12,3;UBERON:0001962,5.81e-08,2;UBERON:0001961,5.81e-08,2;UBERON:0001744,5.81e-08,2;UBERON:0001007,2.41e-07,116;UBERON:0001555,2.41e-07,116;UBERON:0007026,2.41e-07,116;UBERON:0003350,3.05e-07,9;UBERON:0004808,3.05e-07,9;UBERON:0001277,3.05e-07,9;UBERON:0004119,3.66e-07,118;UBERON:0000925,3.66e-07,118;UBERON:0006595,3.66e-07,118|phase1_expression=0,36.9913932097723,25.9349566452036,24.8020653271601,38.0680754759224,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51983330145495,3.89995777814189,32.1569899904411,16.7997178502039,16.3758136841276,30.5937705324762,34.0240675175907,4.43461021310609,0,0,0,0,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52799956237153,0,0,0,0,0,0,0,0,0,0,5.36664234679582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.034791410442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,71.7008759074842,25.9161555330273,0,0,0,0,0.22237804384487,0.570676878337677,15.1849299694244,2.79988223030818,0,0.198956472041151,0,8.08937467788799,27.4495323340862,28.0789195288658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06742634534577,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0.561142271657738,0,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p2@Synj2bp}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:24071 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D6K5 | |||
|association_with_transcript=346bp_to_ENSMUST00000114201_5end | |||
|cluster_id=chr12:82612045..82612070,- | |||
|description=CAGE_peak_2_at_Synj2bp_5end | |||
|id=chr12:82612045..82612070,- | |||
|ontology_enrichment_celltype=CL:0000239!7.90e-14!6;CL:0000677!7.90e-14!6;CL:0000212!7.90e-14!6;CL:0000584!7.90e-14!6;CL:0002563!6.79e-12!9;CL:0002251!6.79e-12!9;CL:0000075!9.77e-12!7;CL:0000473!6.22e-08!3;CL:0000627!6.22e-08!3;CL:0000682!6.22e-08!3;CL:0000066!1.69e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,4.27e-12,3;CL:0000239,7.72e-11,6;CL:0000677,7.72e-11,6;CL:0000584,7.72e-11,6;CL:0000075,2.67e-09,7;CL:0002563,3.05e-07,9;CL:0002251,3.05e-07,9;CL:0000066,7.60e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.90e-25!43;UBERON:0000344!3.72e-24!15;UBERON:0001242!2.74e-20!13;UBERON:0000060!2.74e-20!13;UBERON:0001262!2.74e-20!13;UBERON:0004786!2.74e-20!13;UBERON:0005409!6.61e-17!59;UBERON:0004923!6.72e-14!24;UBERON:0003350!6.79e-12!9;UBERON:0004808!6.79e-12!9;UBERON:0001277!6.79e-12!9;UBERON:0000485!1.60e-09!11;UBERON:0000331!5.05e-08!3;UBERON:0002116!5.05e-08!3;UBERON:0001204!5.05e-08!3;UBERON:0001168!5.05e-08!3;UBERON:0001007!2.07e-07!128;UBERON:0001555!2.07e-07!128;UBERON:0007026!2.07e-07!128;UBERON:0004119!3.38e-07!130;UBERON:0000925!3.38e-07!130;UBERON:0006595!3.38e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.02e-29,31;UBERON:0000344,3.27e-24,15;UBERON:0001242,1.80e-18,13;UBERON:0001262,1.80e-18,13;UBERON:0004786,1.80e-18,13;UBERON:0005409,5.27e-18,47;UBERON:0002108,2.66e-15,4;UBERON:0004923,1.68e-14,24;UBERON:0000331,3.02e-12,3;UBERON:0002116,3.02e-12,3;UBERON:0001204,3.02e-12,3;UBERON:0001168,3.02e-12,3;UBERON:0001962,5.81e-08,2;UBERON:0001961,5.81e-08,2;UBERON:0001744,5.81e-08,2;UBERON:0001007,2.41e-07,116;UBERON:0001555,2.41e-07,116;UBERON:0007026,2.41e-07,116;UBERON:0003350,3.05e-07,9;UBERON:0004808,3.05e-07,9;UBERON:0001277,3.05e-07,9;UBERON:0004119,3.66e-07,118;UBERON:0000925,3.66e-07,118;UBERON:0006595,3.66e-07,118 | |||
|phase1_expression=0,36.9913932097723,25.9349566452036,24.8020653271601,38.0680754759224,0.503637815735669,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51983330145495,3.89995777814189,32.1569899904411,16.7997178502039,16.3758136841276,30.5937705324762,34.0240675175907,4.43461021310609,0,0,0,0,0.664938581433969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52799956237153,0,0,0,0,0,0,0,0,0,0,5.36664234679582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.034791410442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,71.7008759074842,25.9161555330273,0,0,0,0,0.22237804384487,0.570676878337677,15.1849299694244,2.79988223030818,0,0.198956472041151,0,8.08937467788799,27.4495323340862,28.0789195288658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06742634534577,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62332752966866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0.561142271657738,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p2@Synj2bp | |||
}} |
Revision as of 08:24, 5 August 2015
Short description: | p2@Synj2bp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Synj2bp_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 346bp_to_ENSMUST00000114201_5end |
EntrezGene: | 24071 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 4.27e-12 | 3 |
brush border epithelial cell | 7.72e-11 | 6 |
gut absorptive cell | 7.72e-11 | 6 |
enterocyte | 7.72e-11 | 6 |
columnar/cuboidal epithelial cell | 2.67e-09 | 7 |
intestinal epithelial cell | 3.05e-07 | 9 |
epithelial cell of alimentary canal | 3.05e-07 | 9 |
epithelial cell | 7.60e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.02e-29 | 31 |
mucosa | 3.27e-24 | 15 |
intestinal mucosa | 1.80e-18 | 13 |
wall of intestine | 1.80e-18 | 13 |
gastrointestinal system mucosa | 1.80e-18 | 13 |
gastrointestinal system | 5.27e-18 | 47 |
small intestine | 2.66e-15 | 4 |
organ component layer | 1.68e-14 | 24 |
ileal mucosa | 3.02e-12 | 3 |
ileum | 3.02e-12 | 3 |
mucosa of small intestine | 3.02e-12 | 3 |
wall of small intestine | 3.02e-12 | 3 |
gut-associated lymphoid tissue | 5.81e-08 | 2 |
mucosa-associated lymphoid tissue | 5.81e-08 | 2 |
lymphoid tissue | 5.81e-08 | 2 |
digestive system | 2.41e-07 | 116 |
digestive tract | 2.41e-07 | 116 |
primitive gut | 2.41e-07 | 116 |
epithelium of mucosa | 3.05e-07 | 9 |
gastrointestinal system epithelium | 3.05e-07 | 9 |
intestinal epithelium | 3.05e-07 | 9 |
endoderm-derived structure | 3.66e-07 | 118 |
endoderm | 3.66e-07 | 118 |
presumptive endoderm | 3.66e-07 | 118 |