FFCP PHASE1:Mm9::chr1:179726582..179726645,-: Difference between revisions
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{{FFCP|EntrezGene=11566|HGNC=|MCL_coexpression_id=589|UniProt=P46664,B9EIE9,Q8C909|association_with_transcript=0bp_to_ENSMUST00000016105,ENSMUST00000161808,NM_007422,uc007dut.1,uc007duu.1_5end|description=CAGE_peak_1_at_Adss_5end|id=chr1:179726582..179726645,-|ontology_enrichment_celltype=CL:0000063!7.53e-08!66|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!3.05e-17!130;UBERON:0000925!3.05e-17!130;UBERON:0006595!3.05e-17!130;UBERON:0001007!9.30e-17!128;UBERON:0001555!9.30e-17!128;UBERON:0007026!9.30e-17!128;UBERON:0004921!1.07e-15!126;UBERON:0004185!1.07e-15!126;UBERON:0005409!1.36e-08!59;UBERON:0000344!1.80e-08!15;UBERON:0000065!2.51e-08!41;UBERON:0001004!2.65e-08!42;UBERON:0005911!3.02e-08!69;UBERON:0003104!3.26e-08!131;UBERON:0009142!3.26e-08!131;UBERON:0000072!1.29e-07!27;UBERON:0000160!1.60e-07!43;UBERON:0000490!2.10e-07!66;UBERON:0001242!2.34e-07!13;UBERON:0000060!2.34e-07!13;UBERON:0001262!2.34e-07!13;UBERON:0004786!2.34e-07!13;UBERON:0000077!3.26e-07!97;UBERON:0003929!4.94e-07!55;UBERON:0004923!6.55e-07!24;UBERON:0002370!8.57e-07!23;UBERON:0000974!8.57e-07!23;UBERON:0004807!8.57e-07!23;UBERON:0005058!8.57e-07!23;UBERON:0003351!8.57e-07!23;UBERON:0009113!8.57e-07!23;UBERON:0003295!8.57e-07!23;UBERON:0009722!8.57e-07!23;UBERON:0005562!8.57e-07!23;UBERON:0007690!8.57e-07!23;UBERON:0001041!9.00e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.44e-18,118;UBERON:0000925,2.44e-18,118;UBERON:0006595,2.44e-18,118;UBERON:0001007,7.39e-18,116;UBERON:0001555,7.39e-18,116;UBERON:0007026,7.39e-18,116;UBERON:0004921,9.27e-17,114;UBERON:0005409,2.45e-10,47;UBERON:0000160,7.47e-10,31;UBERON:0000344,1.80e-08,15;UBERON:0000065,2.51e-08,41;UBERON:0001004,2.65e-08,42;UBERON:0005911,3.02e-08,69;UBERON:0000072,1.29e-07,27;UBERON:0001041,1.66e-07,80;UBERON:0000490,2.10e-07,66;UBERON:0001242,2.34e-07,13;UBERON:0001262,2.34e-07,13;UBERON:0004786,2.34e-07,13;UBERON:0003929,4.94e-07,55;UBERON:0004923,6.55e-07,24;UBERON:0002370,8.57e-07,23;UBERON:0000974,8.57e-07,23;UBERON:0004807,8.57e-07,23;UBERON:0005058,8.57e-07,23;UBERON:0003351,8.57e-07,23;UBERON:0009113,8.57e-07,23;UBERON:0003295,8.57e-07,23;UBERON:0009722,8.57e-07,23;UBERON:0005562,8.57e-07,23;UBERON:0007690,8.57e-07,23|phase1_expression=67.2625157840135,420.51536620543,392.66434359317,75.0111244040938,103.184520368948,160.324704675855,133.15920513945,121.763294005406,309.453611289363,312.944271692505,150.671812038444,168.31925548016,78.0675328486298,83.2242231028855,65.9557328395012,66.2094124364731,37.7763414189199,73.1872223631111,73.0819931118588,66.6291753322907,42.691731655837,74.8653772054675,70.0015434892347,156.792574337539,153.474809033937,319.272972047951,243.811289826036,251.670399777118,84.37039823863,97.0315999575733,156.098279501335,33.6566256933605,37.5189520426588,79.2408405077194,78.5676405723467,81.9536801617367,88.2011619053435,56.5017701494825,87.5095585866656,102.610653818864,52.3526024347603,59.4249571913848,79.6236978971092,80.4480666863939,78.6684986263433,79.2921969338464,31.2956537739216,29.8694464241212,36.4679063339223,56.3846707315422,50.1151389418798,27.3129872293446,76.6766509683855,79.0644734792365,88.392669174468,48.622033410794,53.5817532685475,42.8007836590277,22.0524942336962,20.1016572123373,15.8457850876545,37.6117430596737,35.5717918444456,17.5480444869873,18.7884608887725,18.4724829885986,18.5752068521411,19.2109152660777,36.4987435325841,30.6463480012938,33.6519938162211,26.8511925339575,31.1424642741775,32.5825525911778,27.5076501822338,28.4957823849107,64.9683697896393,45.7120670344972,58.06326957086,25.5859398196576,22.9633985442048,26.045668527838,46.0651948352279,52.8996853429779,52.1042024918922,33.8822873294718,42.85387592053,41.0078780815661,61.8682999532114,45.4185076241781,95.365416782852,57.6483997577529,114.235184062902,44.255661714301,56.5305483179472,59.5875759839456,50.1386579870354,98.5087264501174,83.131521472918,83.3881395844403,45.6332680076445,61.5967091588726,33.1246811618639,42.6640021891999,219.088933503349,206.995010093156,173.394884640071,63.8287887629545,75.8687999086213,57.4471078180872,52.392568683373,56.6305789660583,61.8049532646237,54.5615958800494,66.3200308245375,67.1059597700467,62.2931318690622,59.1411369802439,45.9997487013935,45.7800185351168,39.9723148413312,42.1841470227643,68.9649516507052,38.9398460025358,34.5587066242201,94.7745674823874,169.298770926865,161.97373736822,168.240980644738,62.6124872712159,58.1025765579656,39.0785035071008,53.5378906192212,51.6545223807268,57.7650763875577,57.4334071259862,78.5181495285939,60.4617877165052,51.302719962036,55.7670918099156,55.5614291450745,44.8309103645272,51.4977691243299,45.5128549863859,56.7424402922074,51.5017155545096,40.0106363870042,42.6860561719376,61.0057419999943,61.6485821347091,54.896750739152,51.7301928529077,55.0533553466684,50.148311979192,45.4778521461555,68.4677877855617,228.921499064115,161.099789853812,158.847396162136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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11566 | |||
|HGNC= | |||
|MCL_coexpression_id=589 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P46664,uniprot:B9EIE9,uniprot:Q8C909 | |||
|association_with_transcript=0bp_to_ENSMUST00000016105,ENSMUST00000161808,NM_007422,uc007dut.1,uc007duu.1_5end | |||
|cluster_id=chr1:179726582..179726645,- | |||
|description=CAGE_peak_1_at_Adss_5end | |||
|id=chr1:179726582..179726645,- | |||
|ontology_enrichment_celltype=CL:0000063!7.53e-08!66 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!3.05e-17!130;UBERON:0000925!3.05e-17!130;UBERON:0006595!3.05e-17!130;UBERON:0001007!9.30e-17!128;UBERON:0001555!9.30e-17!128;UBERON:0007026!9.30e-17!128;UBERON:0004921!1.07e-15!126;UBERON:0004185!1.07e-15!126;UBERON:0005409!1.36e-08!59;UBERON:0000344!1.80e-08!15;UBERON:0000065!2.51e-08!41;UBERON:0001004!2.65e-08!42;UBERON:0005911!3.02e-08!69;UBERON:0003104!3.26e-08!131;UBERON:0009142!3.26e-08!131;UBERON:0000072!1.29e-07!27;UBERON:0000160!1.60e-07!43;UBERON:0000490!2.10e-07!66;UBERON:0001242!2.34e-07!13;UBERON:0000060!2.34e-07!13;UBERON:0001262!2.34e-07!13;UBERON:0004786!2.34e-07!13;UBERON:0000077!3.26e-07!97;UBERON:0003929!4.94e-07!55;UBERON:0004923!6.55e-07!24;UBERON:0002370!8.57e-07!23;UBERON:0000974!8.57e-07!23;UBERON:0004807!8.57e-07!23;UBERON:0005058!8.57e-07!23;UBERON:0003351!8.57e-07!23;UBERON:0009113!8.57e-07!23;UBERON:0003295!8.57e-07!23;UBERON:0009722!8.57e-07!23;UBERON:0005562!8.57e-07!23;UBERON:0007690!8.57e-07!23;UBERON:0001041!9.00e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.44e-18,118;UBERON:0000925,2.44e-18,118;UBERON:0006595,2.44e-18,118;UBERON:0001007,7.39e-18,116;UBERON:0001555,7.39e-18,116;UBERON:0007026,7.39e-18,116;UBERON:0004921,9.27e-17,114;UBERON:0005409,2.45e-10,47;UBERON:0000160,7.47e-10,31;UBERON:0000344,1.80e-08,15;UBERON:0000065,2.51e-08,41;UBERON:0001004,2.65e-08,42;UBERON:0005911,3.02e-08,69;UBERON:0000072,1.29e-07,27;UBERON:0001041,1.66e-07,80;UBERON:0000490,2.10e-07,66;UBERON:0001242,2.34e-07,13;UBERON:0001262,2.34e-07,13;UBERON:0004786,2.34e-07,13;UBERON:0003929,4.94e-07,55;UBERON:0004923,6.55e-07,24;UBERON:0002370,8.57e-07,23;UBERON:0000974,8.57e-07,23;UBERON:0004807,8.57e-07,23;UBERON:0005058,8.57e-07,23;UBERON:0003351,8.57e-07,23;UBERON:0009113,8.57e-07,23;UBERON:0003295,8.57e-07,23;UBERON:0009722,8.57e-07,23;UBERON:0005562,8.57e-07,23;UBERON:0007690,8.57e-07,23 | |||
|phase1_expression=67.2625157840135,420.51536620543,392.66434359317,75.0111244040938,103.184520368948,160.324704675855,133.15920513945,121.763294005406,309.453611289363,312.944271692505,150.671812038444,168.31925548016,78.0675328486298,83.2242231028855,65.9557328395012,66.2094124364731,37.7763414189199,73.1872223631111,73.0819931118588,66.6291753322907,42.691731655837,74.8653772054675,70.0015434892347,156.792574337539,153.474809033937,319.272972047951,243.811289826036,251.670399777118,84.37039823863,97.0315999575733,156.098279501335,33.6566256933605,37.5189520426588,79.2408405077194,78.5676405723467,81.9536801617367,88.2011619053435,56.5017701494825,87.5095585866656,102.610653818864,52.3526024347603,59.4249571913848,79.6236978971092,80.4480666863939,78.6684986263433,79.2921969338464,31.2956537739216,29.8694464241212,36.4679063339223,56.3846707315422,50.1151389418798,27.3129872293446,76.6766509683855,79.0644734792365,88.392669174468,48.622033410794,53.5817532685475,42.8007836590277,22.0524942336962,20.1016572123373,15.8457850876545,37.6117430596737,35.5717918444456,17.5480444869873,18.7884608887725,18.4724829885986,18.5752068521411,19.2109152660777,36.4987435325841,30.6463480012938,33.6519938162211,26.8511925339575,31.1424642741775,32.5825525911778,27.5076501822338,28.4957823849107,64.9683697896393,45.7120670344972,58.06326957086,25.5859398196576,22.9633985442048,26.045668527838,46.0651948352279,52.8996853429779,52.1042024918922,33.8822873294718,42.85387592053,41.0078780815661,61.8682999532114,45.4185076241781,95.365416782852,57.6483997577529,114.235184062902,44.255661714301,56.5305483179472,59.5875759839456,50.1386579870354,98.5087264501174,83.131521472918,83.3881395844403,45.6332680076445,61.5967091588726,33.1246811618639,42.6640021891999,219.088933503349,206.995010093156,173.394884640071,63.8287887629545,75.8687999086213,57.4471078180872,52.392568683373,56.6305789660583,61.8049532646237,54.5615958800494,66.3200308245375,67.1059597700467,62.2931318690622,59.1411369802439,45.9997487013935,45.7800185351168,39.9723148413312,42.1841470227643,68.9649516507052,38.9398460025358,34.5587066242201,94.7745674823874,169.298770926865,161.97373736822,168.240980644738,62.6124872712159,58.1025765579656,39.0785035071008,53.5378906192212,51.6545223807268,57.7650763875577,57.4334071259862,78.5181495285939,60.4617877165052,51.302719962036,55.7670918099156,55.5614291450745,44.8309103645272,51.4977691243299,45.5128549863859,56.7424402922074,51.5017155545096,40.0106363870042,42.6860561719376,61.0057419999943,61.6485821347091,54.896750739152,51.7301928529077,55.0533553466684,50.148311979192,45.4778521461555,68.4677877855617,228.921499064115,161.099789853812,158.847396162136,42.6679091423134,47.3742641161814,44.6553912423317,45.6917339679456,34.6305047875431,35.9442373027591,31.8571504308059,30.0466209567573,38.4157976387988,30.7726919338208,27.9084688934462,26.5095007214948,23.2457980006278,28.1024147572545,26.3044580770329,60.1429252893404,49.188404717298,134.480444674406,124.027315765202,64.1997634111054,61.7749547148766,66.6244775035222,59.9000068131327,60.042071838115,57.0676878337677,88.2624054472792,64.7266892065363,65.5984894968703,68.639982854197,64.7280769235479,109.655967855815,90.7779809473716,101.960331906236,56.9003702859245,69.5773441793249,72.1329508307715,64.9647735826552,63.4224633038136,77.500080978802,69.2440081510617,81.1855813887812,78.342365192846,98.964525465284,72.6308936363515,45.2150236490615,50.31910274898,55.5409417590589,48.6864291332407,47.5119004712261,44.0502723581856,38.5512824184086,61.2871157209634,49.6956157870427,64.6956929373095,58.0539878362865,48.3658393327569,57.3354052939944,76.9614904009003,78.6382939822288,69.0976931223101,64.4270800019648,66.9786053176726,65.861093280773,67.8254817553771,72.8652219871899,57.6065610944153,59.9060298923442,75.8225043150779,56.4734958604376,62.6657240823924,64.2344193685693,69.41936271009,66.2492688303323,48.2532108605671,48.9515115436839,45.7340773907704,59.878273948127,65.1835395350435,61.1845004011301,102.459340860422,33.5786333181816,70.3583329298252,63.6415153203521,52.9941558422685,64.9995130430942,56.3680645428457,50.1045459496233,57.483119637835,63.711777024666,66.0130589170694,33.4174169078679,57.7696146797653,44.8725321241483,90.5651494005883,71.7620034930529,46.460798418987,59.2384752218155,49.5810633422192,64.5029372765172,37.7986422887389,45.8078370436452,82.6970538138308,59.9830653637884,58.1090726767096,54.6743591228962,65.3595373164992,60.8499705164302,56.5129745551288,55.2787558676122,42.5590069645262,49.940529162361,57.6355759337389,52.6188011926108,51.9974905102702,38.6670485375541,87.532547107764,61.219468479644,48.9573043682015,57.0506435177521,67.3306659321926,45.9584487952548,45.9583524412075,45.7953110288721,94.4397910680716,56.740142415216,52.1156186433451,48.2945271033941,57.4103034846106,64.7987492096137,61.7857909299034,61.0837722461415,173.377998593732,166.962082622124,169.847767805637,69.6909551151033,62.9508627226459,64.6555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| |||
|short_description=p1@Adss | |||
}} |
Revision as of 09:15, 5 August 2015
Short description: | p1@Adss |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Adss_5end |
Coexpression cluster: | MCL_coexpression_mm9:589 |
Association with transcript: | 0bp_to_ENSMUST00000016105, ENSMUST00000161808, NM_007422, uc007dut.1, uc007duu.1_5end |
EntrezGene: | 11566 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.44e-18 | 118 |
endoderm | 2.44e-18 | 118 |
presumptive endoderm | 2.44e-18 | 118 |
digestive system | 7.39e-18 | 116 |
digestive tract | 7.39e-18 | 116 |
primitive gut | 7.39e-18 | 116 |
subdivision of digestive tract | 9.27e-17 | 114 |
gastrointestinal system | 2.45e-10 | 47 |
intestine | 7.47e-10 | 31 |
mucosa | 1.80e-08 | 15 |
respiratory tract | 2.51e-08 | 41 |
respiratory system | 2.65e-08 | 42 |
endo-epithelium | 3.02e-08 | 69 |
segment of respiratory tract | 1.29e-07 | 27 |
foregut | 1.66e-07 | 80 |
unilaminar epithelium | 2.10e-07 | 66 |
intestinal mucosa | 2.34e-07 | 13 |
wall of intestine | 2.34e-07 | 13 |
gastrointestinal system mucosa | 2.34e-07 | 13 |
gut epithelium | 4.94e-07 | 55 |
organ component layer | 6.55e-07 | 24 |
thymus | 8.57e-07 | 23 |
neck | 8.57e-07 | 23 |
respiratory system epithelium | 8.57e-07 | 23 |
hemolymphoid system gland | 8.57e-07 | 23 |
pharyngeal epithelium | 8.57e-07 | 23 |
thymic region | 8.57e-07 | 23 |
pharyngeal gland | 8.57e-07 | 23 |
entire pharyngeal arch endoderm | 8.57e-07 | 23 |
thymus primordium | 8.57e-07 | 23 |
early pharyngeal endoderm | 8.57e-07 | 23 |