Personal tools

FFCP PHASE1:Mm9::chr11:109583395..109583409,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=208659|HGNC=|UniProt=Q8CID3,A2AGP7|association_with_transcript=160bp_to_ENSMUST00000020938,NM_153782,uc007mcv.1,uc007mcw.1_5end|description=CAGE_peak_3_at_Fam20a_5end|id=chr11:109583395..109583409,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!3.79e-12!122;UBERON:0000025!3.81e-11!114;UBERON:0005177!2.97e-08!85;UBERON:0002100!6.00e-08!98;UBERON:0000468!7.23e-08!333;UBERON:0000479!6.45e-07!349|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.81e-10,122;UBERON:0000025,1.20e-09,114|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866554859253824,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.183546752161682,3.9119567217402,0.218025156380447,0,0.388859798148567,2.65974201088189,0,0,0,0,19.0371982666601,9.74213695791773,9.7977697532714,0,0,0.633831403506179,2.03306719241479,0,1.7997994345628,2.96659908770092,4.2628806896766,2.69640099466564,2.68952813725088,0.103689612308478,0.270011876663381,0.210324961351382,4.85606673486466,2.42955395046775,0.244981598429908,0.0958454710182364,0,0,1.53224805702225,1.68967186581868,0.131886287730194,0.0914876436024097,0,1.3959149950069,1.12552522006336,1.5279824777681,5.89257170947335,2.84743361598206,0.559198337475902,0.151452386666368,1.51143120213571,5.50742528533188,0.860423876981386,6.79971333707751,3.77792234146472,7.79731700937203,2.24013443548668,0.280888840263504,3.40860645156115,0.519572009205738,1.7666978725517,0.845060518660083,1.28326477414318,0,0,0,0,0,0.91347103775248,0.258937883647172,1.7813056687779,0.520455980298408,0.304465478312141,0.230615497256059,1.95939432718409,1.29347577849275,1.25666591329675,1.23597483867187,2.02439099687876,0,2.75003644910596,3.09178125844551,4.363877278217,1.86391761218122,7.02673912827713,5.65506108396329,0.255457055208591,0,0,0.127070227073065,4.6435098215495,5.94750783664214,0.376963056338593,1.56441888173049,1.53429274398198,3.32460871295296,1.94689515681309,0.81471491080253,3.6078021476927,0.758168275301024,0.841767423545896,0.130120442962704,0.229902104433473,0.720248519221397,0.753524089178575,0.884474488967262,0.512454881139399,0.749613796477831,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0.876782929710299,1.39023624612799,1.0447564995665,2.46938563689532,0.398068533636986,0,0,0,0,0,1.08037236876609,0.710234206755631,1.18058539048442,0.925602677324269,0.465067889500816,1.87791380979733,1.5179494507732,1.6455984991348,1.80584210487005,2.1888578577381,1.16959989940266,1.3173006917463,2.81833479396781,1.68231958851302,0.411618449517138,0.991256348951394,0.528901133327089,0.213288250535234,0,0.902072229254653,0.80673409849337,0.22237804384487,0.380451252225118,0.474529061544512,0.988193728344065,0.251335208800269,1.1937388322469,1.9496408711912,0,0.864552199498777,1.1948476395262,0.189667900953082,0.571242563048644,0,0.203651327845314,0.581857461502877,1.19230893813542,2.02356918797623,1.77132177575523,1.09899109488962,1.72756029490521,3.55743152504579,0.166845105716094,0.196558995113203,0.449724224769707,0.811440485554012,1.20588579876208,1.2731292589071,1.15078454980324,2.91843408195064,0.549122826376163,2.87536413054709,1.86070473834252,2.18426371180192,2.27320990152401,2.69096120282868,3.37710464954357,4.80358294433172,0.947457058852424,1.14075483509418,0.339490171550376,0.704070744865506,2.34508760418542,2.14239276797412,3.12213836572478,3.15270288212382,3.76489972402917,3.6674596791222,2.78567635016755,3.7990696010497,5.06271705035291,0,0,11.8023425524569,33.9402197954821,3.21101179975584,2.57865710502847,0.163934945376675,1.00988370881749,0,0.390438744296638,0,0.477937595905104,0.445597348164788,0.283076530788832,0,0.292255857911312,0.395287777946524,0.963963949265421,2.41298144854057,0.534196811001766,2.11753047159649,3.79431282836832,0,2.18502572539483,1.51161778482376,0.943025398779491,1.47650946440386,2.15204603560749,1.55056975900933,3.27180356529755,1.42598951353889,1.26414703174326,1.05418608574999,2.06271086496374,0,0.36012218806262,0.646793418913773,0.643011105094777,0.886701168211368,0.891844088010353,0.329098041204242,1.522324745573,0.938686832254841,0.63549621259146,1.10264199027481,2.80306630000516,2.9063596805263,1.5078231232039,1.67121281604391,1.64140899745061,2.04036585640896,4.26478194624172,1.02522528478712,1.857481811669,0.555583582109135,0.376736914009382,0.410082683163076,0.228778173206523,0,0,0,0.954670618015114,0,0.203319467126849,0.324016022465404,0.209088296014469,0,0.134864346384821,0.909188012978695,1.83229159388821,0.777689839750757,0.621339313086926,0,0.747582730219894,1.15820943319968,0.583353565032143,0.516639293910924,1.01373675294467,0.352071715937262,0.5208175393758,0.314578033277133,0,0.288030006257865,0.632022241256357,2.22997736819181,0.821687657318618,0.129920822977795,0.716106782669926,0.596044064343795,0.120195449519969,0,0.100966449948148,0.15241361331,0.100826185136841,0,0.192423683280659,0.233753804363138,3.85441652145859,0,0,0,2.51146472241848,3.94133198447482,7.14291334642334,1.92931541171159,0.501572104035363,2.82375921308533,1.38097570952153,2.86447756719698,1.54667864109319,1.37016503954128,0.755393897389701,0.675022500231806,0.45032120322422,1.35942722695261,3.10656187051092,0.207574695168353,0,0.341467211508268,1.45864030240976,0.209613162627982,0.919217542250071,0.888986911206461,0.618105171716683,2.24643446714271,1.51618327058278,1.52087579934144,1.32038438970253,1.68554713445788,1.21647789569252,1.20614484806788,0.952587382566147,1.62238056322798,1.15745532278223,2.06042950401653,1.76638704161277,0.685738504770831,0.887379030796687,0.715308569841963,1.59881058295561,1.12931256498397,0.930760686808441,1.64635175585495,0.526139422875686,1.08643291076689,1.68342681497322,1.66089025373844,1.0835493061312,2.45538625901814,0.619747364743864,2.12197272079256,1.99848462350357,1.63752125911786,2.14871054048298,4.01705497344571,3.52946270591225,2.31867835620421|short_description=p3@Fam20a}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:208659
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q8CID3,uniprot:A2AGP7
|association_with_transcript=160bp_to_ENSMUST00000020938,NM_153782,uc007mcv.1,uc007mcw.1_5end
|cluster_id=chr11:109583395..109583409,-
|description=CAGE_peak_3_at_Fam20a_5end
|id=chr11:109583395..109583409,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!3.79e-12!122;UBERON:0000025!3.81e-11!114;UBERON:0005177!2.97e-08!85;UBERON:0002100!6.00e-08!98;UBERON:0000468!7.23e-08!333;UBERON:0000479!6.45e-07!349
|ontology_enrichment_uberon_v019_2=UBERON:0004111,3.81e-10,122;UBERON:0000025,1.20e-09,114
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866554859253824,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0.251793635951155,0.405507724878058,0.183546752161682,3.9119567217402,0.218025156380447,0,0.388859798148567,2.65974201088189,0,0,0,0,19.0371982666601,9.74213695791773,9.7977697532714,0,0,0.633831403506179,2.03306719241479,0,1.7997994345628,2.96659908770092,4.2628806896766,2.69640099466564,2.68952813725088,0.103689612308478,0.270011876663381,0.210324961351382,4.85606673486466,2.42955395046775,0.244981598429908,0.0958454710182364,0,0,1.53224805702225,1.68967186581868,0.131886287730194,0.0914876436024097,0,1.3959149950069,1.12552522006336,1.5279824777681,5.89257170947335,2.84743361598206,0.559198337475902,0.151452386666368,1.51143120213571,5.50742528533188,0.860423876981386,6.79971333707751,3.77792234146472,7.79731700937203,2.24013443548668,0.280888840263504,3.40860645156115,0.519572009205738,1.7666978725517,0.845060518660083,1.28326477414318,0,0,0,0,0,0.91347103775248,0.258937883647172,1.7813056687779,0.520455980298408,0.304465478312141,0.230615497256059,1.95939432718409,1.29347577849275,1.25666591329675,1.23597483867187,2.02439099687876,0,2.75003644910596,3.09178125844551,4.363877278217,1.86391761218122,7.02673912827713,5.65506108396329,0.255457055208591,0,0,0.127070227073065,4.6435098215495,5.94750783664214,0.376963056338593,1.56441888173049,1.53429274398198,3.32460871295296,1.94689515681309,0.81471491080253,3.6078021476927,0.758168275301024,0.841767423545896,0.130120442962704,0.229902104433473,0.720248519221397,0.753524089178575,0.884474488967262,0.512454881139399,0.749613796477831,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0.876782929710299,1.39023624612799,1.0447564995665,2.46938563689532,0.398068533636986,0,0,0,0,0,1.08037236876609,0.710234206755631,1.18058539048442,0.925602677324269,0.465067889500816,1.87791380979733,1.5179494507732,1.6455984991348,1.80584210487005,2.1888578577381,1.16959989940266,1.3173006917463,2.81833479396781,1.68231958851302,0.411618449517138,0.991256348951394,0.528901133327089,0.213288250535234,0,0.902072229254653,0.80673409849337,0.22237804384487,0.380451252225118,0.474529061544512,0.988193728344065,0.251335208800269,1.1937388322469,1.9496408711912,0,0.864552199498777,1.1948476395262,0.189667900953082,0.571242563048644,0,0.203651327845314,0.581857461502877,1.19230893813542,2.02356918797623,1.77132177575523,1.09899109488962,1.72756029490521,3.55743152504579,0.166845105716094,0.196558995113203,0.449724224769707,0.811440485554012,1.20588579876208,1.2731292589071,1.15078454980324,2.91843408195064,0.549122826376163,2.87536413054709,1.86070473834252,2.18426371180192,2.27320990152401,2.69096120282868,3.37710464954357,4.80358294433172,0.947457058852424,1.14075483509418,0.339490171550376,0.704070744865506,2.34508760418542,2.14239276797412,3.12213836572478,3.15270288212382,3.76489972402917,3.6674596791222,2.78567635016755,3.7990696010497,5.06271705035291,0,0,11.8023425524569,33.9402197954821,3.21101179975584,2.57865710502847,0.163934945376675,1.00988370881749,0,0.390438744296638,0,0.477937595905104,0.445597348164788,0.283076530788832,0,0.292255857911312,0.395287777946524,0.963963949265421,2.41298144854057,0.534196811001766,2.11753047159649,3.79431282836832,0,2.18502572539483,1.51161778482376,0.943025398779491,1.47650946440386,2.15204603560749,1.55056975900933,3.27180356529755,1.42598951353889,1.26414703174326,1.05418608574999,2.06271086496374,0,0.36012218806262,0.646793418913773,0.643011105094777,0.886701168211368,0.891844088010353,0.329098041204242,1.522324745573,0.938686832254841,0.63549621259146,1.10264199027481,2.80306630000516,2.9063596805263,1.5078231232039,1.67121281604391,1.64140899745061,2.04036585640896,4.26478194624172,1.02522528478712,1.857481811669,0.555583582109135,0.376736914009382,0.410082683163076,0.228778173206523,0,0,0,0.954670618015114,0,0.203319467126849,0.324016022465404,0.209088296014469,0,0.134864346384821,0.909188012978695,1.83229159388821,0.777689839750757,0.621339313086926,0,0.747582730219894,1.15820943319968,0.583353565032143,0.516639293910924,1.01373675294467,0.352071715937262,0.5208175393758,0.314578033277133,0,0.288030006257865,0.632022241256357,2.22997736819181,0.821687657318618,0.129920822977795,0.716106782669926,0.596044064343795,0.120195449519969,0,0.100966449948148,0.15241361331,0.100826185136841,0,0.192423683280659,0.233753804363138,3.85441652145859,0,0,0,2.51146472241848,3.94133198447482,7.14291334642334,1.92931541171159,0.501572104035363,2.82375921308533,1.38097570952153,2.86447756719698,1.54667864109319,1.37016503954128,0.755393897389701,0.675022500231806,0.45032120322422,1.35942722695261,3.10656187051092,0.207574695168353,0,0.341467211508268,1.45864030240976,0.209613162627982,0.919217542250071,0.888986911206461,0.618105171716683,2.24643446714271,1.51618327058278,1.52087579934144,1.32038438970253,1.68554713445788,1.21647789569252,1.20614484806788,0.952587382566147,1.62238056322798,1.15745532278223,2.06042950401653,1.76638704161277,0.685738504770831,0.887379030796687,0.715308569841963,1.59881058295561,1.12931256498397,0.930760686808441,1.64635175585495,0.526139422875686,1.08643291076689,1.68342681497322,1.66089025373844,1.0835493061312,2.45538625901814,0.619747364743864,2.12197272079256,1.99848462350357,1.63752125911786,2.14871054048298,4.01705497344571,3.52946270591225,2.31867835620421
|short_description=p3@Fam20a
}}

Revision as of 09:18, 5 August 2015

Short description:p3@Fam20a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Fam20a_5end
Coexpression cluster:NA
Association with transcript: 160bp_to_ENSMUST00000020938, NM_153782, uc007mcv.1, uc007mcw.1_5end
EntrezGene:208659
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Fam20a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.91
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.66
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C119.04
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E19.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C59.80
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D24.26
Mouse Microglia, donor1.CNhs12629.11718-123C82.70
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.69
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.89
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.80
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.24
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.77
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.26
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H12.02
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A63.09
bone (os femoris), neonate N20.CNhs11195.1350-25C34.36
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A44.64
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D51.56
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F23.32
diencephalon, neonate N30.CNhs11201.1388-42B21.95
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.81
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.61
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.88
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G12.19
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D22.82
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G71.19
kidney, neonate N10.CNhs11206.758-6D52.02
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H11.73
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.21
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B14.80
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I62.14
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A33.76
lung, neonate N10.CNhs11219.750-23E63.67
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C73.80
lung, neonate N30.CNhs11133.1394-42H25.06
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B611.80
mammary gland, adult pregnant day19.CNhs10476.588-5H233.94
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A32.58
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G63.79
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I72.15
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D73.27
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.64
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G42.91
skin, neonate N03.CNhs11215.662-22H31.51
skin, neonate N06.CNhs11097.693-20I51.67
skin, neonate N10.CNhs11108.762-6C41.64
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.52
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F53.94
uterus, adult.CNhs10509.92-27E57.14
vagina, adult.CNhs10502.89-27D51.93
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.11
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anatomical conduit3.81e-10122
tube1.20e-09114
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:109583395..109583409,-&oldid=3883386"