Personal tools

FFCP PHASE1:Mm9::chr2:72314282..72314316,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=66953|HGNC=|UniProt=A2AR39|association_with_transcript=0bp_to_ENSMUST00000157019_5end|description=CAGE_peak_2_at_Cdca7_5end|id=chr2:72314282..72314316,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001007,5.76e-09,116;UBERON:0001555,5.76e-09,116;UBERON:0007026,5.76e-09,116;UBERON:0000153,1.31e-08,43;UBERON:0004177,1.55e-08,29;UBERON:0005057,1.55e-08,29;UBERON:0004119,1.86e-08,118;UBERON:0000925,1.86e-08,118;UBERON:0006595,1.86e-08,118;UBERON:0004921,2.91e-08,114;UBERON:0005409,5.22e-08,47;UBERON:0006562,6.67e-08,24;UBERON:0001557,6.67e-08,24;UBERON:0001042,6.67e-08,24;UBERON:0008814,6.67e-08,24;UBERON:0009145,6.67e-08,24;UBERON:0002370,8.19e-08,23;UBERON:0000974,8.19e-08,23;UBERON:0004807,8.19e-08,23;UBERON:0005058,8.19e-08,23;UBERON:0003351,8.19e-08,23;UBERON:0009113,8.19e-08,23;UBERON:0003295,8.19e-08,23;UBERON:0009722,8.19e-08,23;UBERON:0005562,8.19e-08,23;UBERON:0007690,8.19e-08,23;UBERON:0003408,3.42e-07,24;UBERON:0000160,9.13e-07,31|phase1_expression=0.640595388419176,0,0.454999239389536,0.90739263392049,0.500895729946347,1.17515490338323,2.56973904655078,0.516493293766305,0.985521055061667,1.40438715793196,3.25314139628459,2.23362045186942,0,0,0.666219523631325,1.61980213911861,1.39912375625629,0.630924330716475,0.137114433605739,0.84877930359606,1.7008658030214,3.77305614563364,5.22399578277871,2.71987118748791,2.2940928106717,0.57423196411502,0.430761996159075,0.861884930743556,2.47030445293286,1.51218077855958,1.99557459589774,2.54012269383853,7.38077745101484,0,10.9763615505484,14.4624141461888,12.6585000882669,0.418531630736908,1.5626706890476,0.523523743973798,1.17646297606203,0,0.971020706062307,0,0.101376931219515,0.183546752161682,0.782391344348039,3.48840250208714,0.219686182734472,0.388859798148567,1.25987779462826,0,0.335565212115473,0,0,0.514518872071894,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,1.65903379693564,1.4850653216486,1.68259969081106,0.285650984403804,0,10.9016811301309,9.68039257284187,11.0306254393203,0,0,0.153606533256243,2.2420668914133,1.09785172322892,0.52091337055676,0,0,0,0.589257170947335,0.284743361598206,0,0.151452386666368,0.226714680320357,0.579728977403356,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0.70667914902068,0.14084341977668,0,0,0,0.432982082022428,0.760079596425296,0,1.1418387971906,0.776813650941515,0,1.56136794089522,0.913396434936424,0.461230994512117,0.60289056221049,0,0,0.247194967734374,0,0,0.808834249737046,1.54589062922275,0.969750506270444,0,0,0,1.27728527604296,2.63593273913025,1.79970819298022,1.52484272487678,0,0,1.7591609295801,0,0,0,0,1.32391173005411,0.373220911830279,0.505445516867349,0.210441855886474,3.6433724029557,2.98872735763515,2.16074555766419,1.65775299619287,0.748401490664606,0.2562274405697,0.468508622798644,0,4.74249584452253,5.29497024469894,3.16712023495108,1.97276159184817,2.78047249225598,2.089512999133,2.46938563689532,1.39323986772945,3.51106593656617,2.83082697826187,1.70498099637356,0.414251545071004,1.40715635988658,0.36012412292203,0.710234206755631,0.590292695242212,0.925602677324269,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.32833492815819,0,0.146199987425332,0.219550115291051,0,0.210289948564127,0.514523061896422,0,1.32225283331772,3.62590025909898,3.48355007790658,2.44848176511977,1.4117846723634,2.2237804384487,1.52180500890047,1.89811624617805,1.97638745668813,2.5133520880027,2.38747766449381,1.16978452271472,2.69645822596266,1.72910439899755,1.59313018603494,4.1726938209678,3.42745537829186,2.25415471346161,1.83286195060783,1.74557238450863,1.26244475802573,0.822074982615345,0.147610147979602,0.156998727841375,0,0.889357881261447,1.33476084572875,1.37591296579242,1.12431056192427,1.42002084971952,0.482354319504834,0.25462585178142,1.43848068725405,0.648540907100142,1.09824565275233,1.43768206527355,0,0.312037673114561,0.252578877947112,0.358794827043824,0,0,2.84237117655727,3.25929952884052,2.8856664581782,1.40814148973101,2.01007508930179,0,0.390267295715598,1.10344600874334,0.664394068946325,0.478364305972461,0,0,0.144649058581512,0,0,0,0.275936746304732,0.160550589987792,0,1.96721934452011,0,2.2085575359138,0.780877488593277,2.15423397732799,1.91175038362042,0.445597348164788,0.566153061577665,1.21443210502468,0,0.395287777946524,0.963963949265421,0.425820255624806,2.31485284767432,0.651547837414304,1.64970122972535,0,1.45668381692989,1.209294227859,0.754420319023592,0,0.614870295887855,0.258428293168221,0.363533729477506,1.42598951353889,0.948110273807448,0,0,0,1.8006109403131,1.16422815404479,2.35770738534752,1.06404140185364,0.535106452806212,0.329098041204242,0.913394847343798,0.704015124191131,0,0,0.65954501176592,0.807322133479528,1.38719727334758,1.07435109602823,1.47726809770555,2.33184669303881,0,1.36696704638282,2.47664241555867,0.925972636848558,2.0720530270516,1.0935538217682,2.51655990527175,1.01987057996313,1.95932033253121,1.65839968565309,0.954670618015114,3.79603192297362,2.64315307264903,1.94409613479242,1.46361807210128,2.40198820120795,1.75323650300267,0.991841468704031,0,0.777689839750757,0,0,1.34564891439581,0.992750942742586,0.972255941720238,1.6790777052105,1.18269287843545,1.17357238645754,0.781226309063701,2.51662426621706,0.724752362478018,0.288030006257865,10.1123558601017,3.85177909051312,5.44368072973584,8.57477431653447,13.0689487837261,12.1195626416572,10.0964177596774,10.9290250109187,12.317906893674,10.287918898425,11.1917065501893,12.4746087346883,9.1401249558313,6.89573722871257,1.36038230169127,0.665957860122194,1.52513556236109,0.503653849092235,0.579568782096571,0.375364950902364,2.93042598827624,1.50057865355346,0,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0.453142408984205,0,4.4628559461196,3.99024873401031,1.70733605754134,2.91728060481953,0.628839487883947,0.551530525350042,0.44449345560323,1.44224540067226,0.64183841918363,0,0.25347929989024,0.754505365544305,0.749132059759059,0.704276676453562,0.631790158511746,1.42888107384922,1.0429589335037,0.964546102318525,0.412085900803307,0.588795680537589,0.685738504770831,0.532427418478012,1.1921809497366,1.30811774969096,0.188218760830661,1.26921911837515,1.09756783723664,0,0.543216455383447,1.12228454331548,0.711810108745045,0.0985044823755635,0.818462086339379,0.619747364743864,1.35034627686799,0.249810577937946,0.935726433781634,0.859484216193193,0,0.441182838239031,0|short_description=p2@Cdca7}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:66953
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:A2AR39
|association_with_transcript=0bp_to_ENSMUST00000157019_5end
|cluster_id=chr2:72314282..72314316,+
|description=CAGE_peak_2_at_Cdca7_5end
|id=chr2:72314282..72314316,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0001007,5.76e-09,116;UBERON:0001555,5.76e-09,116;UBERON:0007026,5.76e-09,116;UBERON:0000153,1.31e-08,43;UBERON:0004177,1.55e-08,29;UBERON:0005057,1.55e-08,29;UBERON:0004119,1.86e-08,118;UBERON:0000925,1.86e-08,118;UBERON:0006595,1.86e-08,118;UBERON:0004921,2.91e-08,114;UBERON:0005409,5.22e-08,47;UBERON:0006562,6.67e-08,24;UBERON:0001557,6.67e-08,24;UBERON:0001042,6.67e-08,24;UBERON:0008814,6.67e-08,24;UBERON:0009145,6.67e-08,24;UBERON:0002370,8.19e-08,23;UBERON:0000974,8.19e-08,23;UBERON:0004807,8.19e-08,23;UBERON:0005058,8.19e-08,23;UBERON:0003351,8.19e-08,23;UBERON:0009113,8.19e-08,23;UBERON:0003295,8.19e-08,23;UBERON:0009722,8.19e-08,23;UBERON:0005562,8.19e-08,23;UBERON:0007690,8.19e-08,23;UBERON:0003408,3.42e-07,24;UBERON:0000160,9.13e-07,31
|phase1_expression=0.640595388419176,0,0.454999239389536,0.90739263392049,0.500895729946347,1.17515490338323,2.56973904655078,0.516493293766305,0.985521055061667,1.40438715793196,3.25314139628459,2.23362045186942,0,0,0.666219523631325,1.61980213911861,1.39912375625629,0.630924330716475,0.137114433605739,0.84877930359606,1.7008658030214,3.77305614563364,5.22399578277871,2.71987118748791,2.2940928106717,0.57423196411502,0.430761996159075,0.861884930743556,2.47030445293286,1.51218077855958,1.99557459589774,2.54012269383853,7.38077745101484,0,10.9763615505484,14.4624141461888,12.6585000882669,0.418531630736908,1.5626706890476,0.523523743973798,1.17646297606203,0,0.971020706062307,0,0.101376931219515,0.183546752161682,0.782391344348039,3.48840250208714,0.219686182734472,0.388859798148567,1.25987779462826,0,0.335565212115473,0,0,0.514518872071894,0,0,0,0.528990979272033,0.633831403506179,0,0,0,0,0,0.299600110518405,0,1.65903379693564,1.4850653216486,1.68259969081106,0.285650984403804,0,10.9016811301309,9.68039257284187,11.0306254393203,0,0,0.153606533256243,2.2420668914133,1.09785172322892,0.52091337055676,0,0,0,0.589257170947335,0.284743361598206,0,0.151452386666368,0.226714680320357,0.579728977403356,0,0,0,0,0,0.140444420131752,0.340860645156116,0,0.70667914902068,0.14084341977668,0,0,0,0.432982082022428,0.760079596425296,0,1.1418387971906,0.776813650941515,0,1.56136794089522,0.913396434936424,0.461230994512117,0.60289056221049,0,0,0.247194967734374,0,0,0.808834249737046,1.54589062922275,0.969750506270444,0,0,0,1.27728527604296,2.63593273913025,1.79970819298022,1.52484272487678,0,0,1.7591609295801,0,0,0,0,1.32391173005411,0.373220911830279,0.505445516867349,0.210441855886474,3.6433724029557,2.98872735763515,2.16074555766419,1.65775299619287,0.748401490664606,0.2562274405697,0.468508622798644,0,4.74249584452253,5.29497024469894,3.16712023495108,1.97276159184817,2.78047249225598,2.089512999133,2.46938563689532,1.39323986772945,3.51106593656617,2.83082697826187,1.70498099637356,0.414251545071004,1.40715635988658,0.36012412292203,0.710234206755631,0.590292695242212,0.925602677324269,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0.32833492815819,0,0.146199987425332,0.219550115291051,0,0.210289948564127,0.514523061896422,0,1.32225283331772,3.62590025909898,3.48355007790658,2.44848176511977,1.4117846723634,2.2237804384487,1.52180500890047,1.89811624617805,1.97638745668813,2.5133520880027,2.38747766449381,1.16978452271472,2.69645822596266,1.72910439899755,1.59313018603494,4.1726938209678,3.42745537829186,2.25415471346161,1.83286195060783,1.74557238450863,1.26244475802573,0.822074982615345,0.147610147979602,0.156998727841375,0,0.889357881261447,1.33476084572875,1.37591296579242,1.12431056192427,1.42002084971952,0.482354319504834,0.25462585178142,1.43848068725405,0.648540907100142,1.09824565275233,1.43768206527355,0,0.312037673114561,0.252578877947112,0.358794827043824,0,0,2.84237117655727,3.25929952884052,2.8856664581782,1.40814148973101,2.01007508930179,0,0.390267295715598,1.10344600874334,0.664394068946325,0.478364305972461,0,0,0.144649058581512,0,0,0,0.275936746304732,0.160550589987792,0,1.96721934452011,0,2.2085575359138,0.780877488593277,2.15423397732799,1.91175038362042,0.445597348164788,0.566153061577665,1.21443210502468,0,0.395287777946524,0.963963949265421,0.425820255624806,2.31485284767432,0.651547837414304,1.64970122972535,0,1.45668381692989,1.209294227859,0.754420319023592,0,0.614870295887855,0.258428293168221,0.363533729477506,1.42598951353889,0.948110273807448,0,0,0,1.8006109403131,1.16422815404479,2.35770738534752,1.06404140185364,0.535106452806212,0.329098041204242,0.913394847343798,0.704015124191131,0,0,0.65954501176592,0.807322133479528,1.38719727334758,1.07435109602823,1.47726809770555,2.33184669303881,0,1.36696704638282,2.47664241555867,0.925972636848558,2.0720530270516,1.0935538217682,2.51655990527175,1.01987057996313,1.95932033253121,1.65839968565309,0.954670618015114,3.79603192297362,2.64315307264903,1.94409613479242,1.46361807210128,2.40198820120795,1.75323650300267,0.991841468704031,0,0.777689839750757,0,0,1.34564891439581,0.992750942742586,0.972255941720238,1.6790777052105,1.18269287843545,1.17357238645754,0.781226309063701,2.51662426621706,0.724752362478018,0.288030006257865,10.1123558601017,3.85177909051312,5.44368072973584,8.57477431653447,13.0689487837261,12.1195626416572,10.0964177596774,10.9290250109187,12.317906893674,10.287918898425,11.1917065501893,12.4746087346883,9.1401249558313,6.89573722871257,1.36038230169127,0.665957860122194,1.52513556236109,0.503653849092235,0.579568782096571,0.375364950902364,2.93042598827624,1.50057865355346,0,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0.453142408984205,0,4.4628559461196,3.99024873401031,1.70733605754134,2.91728060481953,0.628839487883947,0.551530525350042,0.44449345560323,1.44224540067226,0.64183841918363,0,0.25347929989024,0.754505365544305,0.749132059759059,0.704276676453562,0.631790158511746,1.42888107384922,1.0429589335037,0.964546102318525,0.412085900803307,0.588795680537589,0.685738504770831,0.532427418478012,1.1921809497366,1.30811774969096,0.188218760830661,1.26921911837515,1.09756783723664,0,0.543216455383447,1.12228454331548,0.711810108745045,0.0985044823755635,0.818462086339379,0.619747364743864,1.35034627686799,0.249810577937946,0.935726433781634,0.859484216193193,0,0.441182838239031,0
|short_description=p2@Cdca7
}}

Revision as of 10:34, 5 August 2015

Short description:p2@Cdca7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cdca7_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000157019_5end
EntrezGene:66953
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cdca7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.40
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.25
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.23
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.22
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C11.51
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G67.38
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.98
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F614.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F712.66
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H11.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.66
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.90
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F29.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.56
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.52
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C63.64
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C60.75
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H25.29
forelimb, embryo E13.CNhs10589.384-1E23.17
forelimb, embryo E14.CNhs10577.413-26A81.97
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I61.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.83
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.70
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I53.63
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H41.41
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D11.90
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I94.17
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G71.26
kidney, neonate N10.CNhs11206.758-6D50.82
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G22.84
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C52.89
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.97
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H72.31
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F21.21
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E61.80
pituitary gland, embryo E13.CNhs11009.370-44C71.16
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H31.39
skin, neonate N06.CNhs11097.693-20I51.07
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G32.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.02
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E33.80
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D41.94
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B81.75
stomach, neonate N07.CNhs11210.718-18A90.99
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I51.68
testis, embryo E18.CNhs11027.503-18G51.18
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D92.52
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B510.11
thymus, embryo E14.CNhs11041.402-44I43.85
thymus, embryo E15.CNhs11005.430-45I25.44
thymus, embryo E16.CNhs11002.456-26C58.57
thymus, embryo E17.CNhs10581.478-18C113.07
thymus, embryo E18.CNhs10595.1273-19G412.12
thymus, neonate N02.CNhs11181.1541-43F810.10
thymus, neonate N03.CNhs11137.2104-43C710.93
thymus, neonate N06.CNhs11197.681-26C412.32
thymus, neonate N07.CNhs11211.713-19D310.29
thymus, neonate N10.CNhs11194.748-24E411.19
thymus, neonate N20.CNhs11186.820-7A212.47
thymus, neonate N25.CNhs11125.1362-25G79.14
thymus, neonate N30.CNhs11132.1393-42G26.90
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.53
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E52.93
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I84.46
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive system5.76e-09116
digestive tract5.76e-09116
primitive gut5.76e-09116
anterior region of body1.31e-0843
hemopoietic organ1.55e-0829
immune organ1.55e-0829
endoderm-derived structure1.86e-08118
endoderm1.86e-08118
presumptive endoderm1.86e-08118
subdivision of digestive tract2.91e-08114
gastrointestinal system5.22e-0847
pharynx6.67e-0824
upper respiratory tract6.67e-0824
chordate pharynx6.67e-0824
pharyngeal arch system6.67e-0824
pharyngeal region of foregut6.67e-0824
thymus8.19e-0823
neck8.19e-0823
respiratory system epithelium8.19e-0823
hemolymphoid system gland8.19e-0823
pharyngeal epithelium8.19e-0823
thymic region8.19e-0823
pharyngeal gland8.19e-0823
entire pharyngeal arch endoderm8.19e-0823
thymus primordium8.19e-0823
early pharyngeal endoderm8.19e-0823
gland of gut3.42e-0724
intestine9.13e-0731
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:72314282..72314316,%2B&oldid=3889991"