FFCP PHASE1:Mm9::chr17:88049792..88049806,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=358|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:88049792..88049806,+|id=chr17:88049792..88049806,+|ontology_enrichment_celltype=CL:0000066!1.16e-14!25;CL:0002076!4.25e-12!15;CL:0002563!4.59e-12!9;CL:0002251!4.59e-12!9;CL:0000075!1.17e-09!7;CL:0000223!1.33e-09!20;CL:0000239!1.10e-08!6;CL:0000677!1.10e-08!6;CL:0000212!1.10e-08!6;CL:0000584!1.10e-08!6|ontology_enrichment_celltype_v019_2=CL:0000068,3.06e-18,3;CL:0002202,3.06e-18,3;CL:0000069,3.06e-18,3;CL:0002632,3.06e-18,3;CL:0002368,3.06e-18,3;CL:0000307,3.06e-18,3;CL:0000377,3.06e-18,3;CL:0002076,1.28e-13,15;CL:0000066,7.11e-11,25;CL:0000223,3.91e-10,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.61e-20!15;UBERON:0000160!1.30e-18!43;UBERON:0001242!4.10e-17!13;UBERON:0000060!4.10e-17!13;UBERON:0001262!4.10e-17!13;UBERON:0004786!4.10e-17!13;UBERON:0005409!2.04e-15!59;UBERON:0000485!4.82e-14!11;UBERON:0003350!4.59e-12!9;UBERON:0004808!4.59e-12!9;UBERON:0001277!4.59e-12!9;UBERON:0004923!1.17e-10!24;UBERON:0001007!1.69e-09!128;UBERON:0001555!1.69e-09!128;UBERON:0007026!1.69e-09!128;UBERON:0004119!3.66e-09!130;UBERON:0000925!3.66e-09!130;UBERON:0006595!3.66e-09!130;UBERON:0004921!3.34e-08!126;UBERON:0004185!3.34e-08!126|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.50e-25,15;UBERON:0000331,5.18e-19,3;UBERON:0002116,5.18e-19,3;UBERON:0001204,5.18e-19,3;UBERON:0001168,5.18e-19,3;UBERON:0003126,3.06e-18,3;UBERON:0001005,3.06e-18,3;UBERON:0007196,3.06e-18,3;UBERON:0001558,3.06e-18,3;UBERON:0001242,4.22e-16,13;UBERON:0001262,4.22e-16,13;UBERON:0004786,4.22e-16,13;UBERON:0004923,3.21e-15,24;UBERON:0002108,2.06e-14,4;UBERON:0000160,2.75e-14,31;UBERON:0001962,1.83e-13,2;UBERON:0001961,1.83e-13,2;UBERON:0001744,1.83e-13,2;UBERON:0002465,2.85e-09,3;UBERON:0005409,4.45e-09,47;UBERON:0001007,2.28e-08,116;UBERON:0001555,2.28e-08,116;UBERON:0007026,2.28e-08,116;UBERON:0004119,3.38e-08,118;UBERON:0000925,3.38e-08,118;UBERON:0006595,3.38e-08,118;UBERON:0003199,1.59e-07,1|phase1_expression=0.480446541314382,0.697950815278722,0.909998478779072,0.90739263392049,1.50268718983904,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,6.39969691173627,6.19405058881359,2.29692785646008,0.86152399231815,0.861884930743556,8.7410772949932,3.2763916868791,1.99557459589774,0,0,0,0.288851619751275,0.997407872150954,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,1.73192832808971,1.77351905832569,3.0331466700887,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.32225283331772,0,0.232236671860439,0,0.403367049246685,0,0.190225626112559,1.42358718463353,0.494096864172033,0.502670417600539,0.397912944082302,0.58489226135736,0.898819408654221,0.864552199498777,0.995706366271836,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0.234690248288502,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0.388844919875379,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.0897138566094757,0.167884616364078,0,0.375364950902364,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:88049792..88049806,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=358 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:88049792..88049806,+ | |||
|description=CAGE_peak_at_chr17:88049792..88049806,+ | |||
|id=chr17:88049792..88049806,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.16e-14!25;CL:0002076!4.25e-12!15;CL:0002563!4.59e-12!9;CL:0002251!4.59e-12!9;CL:0000075!1.17e-09!7;CL:0000223!1.33e-09!20;CL:0000239!1.10e-08!6;CL:0000677!1.10e-08!6;CL:0000212!1.10e-08!6;CL:0000584!1.10e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.06e-18,3;CL:0002202,3.06e-18,3;CL:0000069,3.06e-18,3;CL:0002632,3.06e-18,3;CL:0002368,3.06e-18,3;CL:0000307,3.06e-18,3;CL:0000377,3.06e-18,3;CL:0002076,1.28e-13,15;CL:0000066,7.11e-11,25;CL:0000223,3.91e-10,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.61e-20!15;UBERON:0000160!1.30e-18!43;UBERON:0001242!4.10e-17!13;UBERON:0000060!4.10e-17!13;UBERON:0001262!4.10e-17!13;UBERON:0004786!4.10e-17!13;UBERON:0005409!2.04e-15!59;UBERON:0000485!4.82e-14!11;UBERON:0003350!4.59e-12!9;UBERON:0004808!4.59e-12!9;UBERON:0001277!4.59e-12!9;UBERON:0004923!1.17e-10!24;UBERON:0001007!1.69e-09!128;UBERON:0001555!1.69e-09!128;UBERON:0007026!1.69e-09!128;UBERON:0004119!3.66e-09!130;UBERON:0000925!3.66e-09!130;UBERON:0006595!3.66e-09!130;UBERON:0004921!3.34e-08!126;UBERON:0004185!3.34e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.50e-25,15;UBERON:0000331,5.18e-19,3;UBERON:0002116,5.18e-19,3;UBERON:0001204,5.18e-19,3;UBERON:0001168,5.18e-19,3;UBERON:0003126,3.06e-18,3;UBERON:0001005,3.06e-18,3;UBERON:0007196,3.06e-18,3;UBERON:0001558,3.06e-18,3;UBERON:0001242,4.22e-16,13;UBERON:0001262,4.22e-16,13;UBERON:0004786,4.22e-16,13;UBERON:0004923,3.21e-15,24;UBERON:0002108,2.06e-14,4;UBERON:0000160,2.75e-14,31;UBERON:0001962,1.83e-13,2;UBERON:0001961,1.83e-13,2;UBERON:0001744,1.83e-13,2;UBERON:0002465,2.85e-09,3;UBERON:0005409,4.45e-09,47;UBERON:0001007,2.28e-08,116;UBERON:0001555,2.28e-08,116;UBERON:0007026,2.28e-08,116;UBERON:0004119,3.38e-08,118;UBERON:0000925,3.38e-08,118;UBERON:0006595,3.38e-08,118;UBERON:0003199,1.59e-07,1 | |||
|phase1_expression=0.480446541314382,0.697950815278722,0.909998478779072,0.90739263392049,1.50268718983904,0.839396359559449,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,6.39969691173627,6.19405058881359,2.29692785646008,0.86152399231815,0.861884930743556,8.7410772949932,3.2763916868791,1.99557459589774,0,0,0,0.288851619751275,0.997407872150954,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,1.73192832808971,1.77351905832569,3.0331466700887,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,1.32225283331772,0,0.232236671860439,0,0.403367049246685,0,0.190225626112559,1.42358718463353,0.494096864172033,0.502670417600539,0.397912944082302,0.58489226135736,0.898819408654221,0.864552199498777,0.995706366271836,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.189491411770485,0,0,0.234690248288502,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0.388844919875379,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.0897138566094757,0.167884616364078,0,0.375364950902364,0,0,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:88049792..88049806,+ | |||
}} |
Latest revision as of 11:35, 5 August 2015
Short description: | p@chr17:88049792..88049806, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:88049792..88049806, + |
Coexpression cluster: | MCL_coexpression_mm9:358 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.06e-18 | 3 |
epithelial cell of tracheobronchial tree | 3.06e-18 | 3 |
branched duct epithelial cell | 3.06e-18 | 3 |
epithelial cell of lower respiratory tract | 3.06e-18 | 3 |
respiratory epithelial cell | 3.06e-18 | 3 |
tracheal epithelial cell | 3.06e-18 | 3 |
tracheoblast | 3.06e-18 | 3 |
endo-epithelial cell | 1.28e-13 | 15 |
epithelial cell | 7.11e-11 | 25 |
endodermal cell | 3.91e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.50e-25 | 15 |
ileal mucosa | 5.18e-19 | 3 |
ileum | 5.18e-19 | 3 |
mucosa of small intestine | 5.18e-19 | 3 |
wall of small intestine | 5.18e-19 | 3 |
trachea | 3.06e-18 | 3 |
respiratory airway | 3.06e-18 | 3 |
tracheobronchial tree | 3.06e-18 | 3 |
lower respiratory tract | 3.06e-18 | 3 |
intestinal mucosa | 4.22e-16 | 13 |
wall of intestine | 4.22e-16 | 13 |
gastrointestinal system mucosa | 4.22e-16 | 13 |
organ component layer | 3.21e-15 | 24 |
small intestine | 2.06e-14 | 4 |
intestine | 2.75e-14 | 31 |
gut-associated lymphoid tissue | 1.83e-13 | 2 |
mucosa-associated lymphoid tissue | 1.83e-13 | 2 |
lymphoid tissue | 1.83e-13 | 2 |
lymphoid system | 2.85e-09 | 3 |
gastrointestinal system | 4.45e-09 | 47 |
digestive system | 2.28e-08 | 116 |
digestive tract | 2.28e-08 | 116 |
primitive gut | 2.28e-08 | 116 |
endoderm-derived structure | 3.38e-08 | 118 |
endoderm | 3.38e-08 | 118 |
presumptive endoderm | 3.38e-08 | 118 |
egg chamber | 1.59e-07 | 1 |