FFCP PHASE1:Mm9::chr4:43591581..43591644,+: Difference between revisions
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{{FFCP|EntrezGene=242406|HGNC=|MCL_coexpression_id=789|UniProt=Q8BHT7,Q3TDM6|association_with_transcript=0bp_to_ENSMUST00000107886,ENSMUST00000117140,NM_172866,uc008sqj.1_5end|description=CAGE_peak_2_at_Rgp1_5end|id=chr4:43591581..43591644,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.03e-11!130;UBERON:0000925!1.03e-11!130;UBERON:0006595!1.03e-11!130;UBERON:0001007!7.66e-11!128;UBERON:0001555!7.66e-11!128;UBERON:0007026!7.66e-11!128;UBERON:0005409!2.55e-10!59;UBERON:0004921!3.23e-10!126;UBERON:0004185!3.23e-10!126;UBERON:0009854!1.48e-09!23;UBERON:0009856!1.48e-09!23;UBERON:0002107!6.44e-09!22;UBERON:0007499!6.44e-09!22;UBERON:0006925!6.44e-09!22;UBERON:0009497!6.44e-09!22;UBERON:0000015!6.44e-09!22;UBERON:0002423!6.44e-09!22;UBERON:0006235!6.44e-09!22;UBERON:0008835!6.44e-09!22;UBERON:0003894!6.44e-09!22;UBERON:0004161!6.44e-09!22;UBERON:0008836!6.44e-09!22;UBERON:0009569!7.93e-09!66;UBERON:0005172!1.28e-08!49;UBERON:0005173!1.28e-08!49;UBERON:0002417!1.28e-08!49;UBERON:0000916!1.28e-08!49;UBERON:0002365!1.81e-08!25;UBERON:0002330!1.81e-08!25;UBERON:0000160!3.21e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.85e-11,118;UBERON:0000925,1.85e-11,118;UBERON:0006595,1.85e-11,118;UBERON:0005409,3.88e-11,47;UBERON:0001007,1.37e-10,116;UBERON:0001555,1.37e-10,116;UBERON:0007026,1.37e-10,116;UBERON:0004921,5.72e-10,114;UBERON:0009854,1.47e-09,23;UBERON:0009856,1.47e-09,23;UBERON:0000160,2.38e-09,31;UBERON:0002100,4.60e-09,90;UBERON:0002107,6.38e-09,22;UBERON:0007499,6.38e-09,22;UBERON:0006925,6.38e-09,22;UBERON:0009497,6.38e-09,22;UBERON:0000015,6.38e-09,22;UBERON:0002423,6.38e-09,22;UBERON:0006235,6.38e-09,22;UBERON:0008835,6.38e-09,22;UBERON:0003894,6.38e-09,22;UBERON:0004161,6.38e-09,22;UBERON:0008836,6.38e-09,22;UBERON:0009569,7.86e-09,66;UBERON:0005177,8.44e-09,79;UBERON:0003104,1.27e-08,61;UBERON:0009142,1.27e-08,61;UBERON:0005172,1.27e-08,49;UBERON:0005173,1.27e-08,49;UBERON:0002417,1.27e-08,49;UBERON:0000916,1.27e-08,49;UBERON:0002365,1.80e-08,25;UBERON:0002330,1.80e-08,25;UBERON:0005256,1.90e-07,45|phase1_expression=1.60148847104794,16.0528687514106,20.0199665331396,18.1478526784098,28.0501608769954,5.87577451691614,7.70921713965235,0.774739940649458,0.422366166455,0.936258105287974,0.856089841127525,0.8774937489487,1.71200729931206,1.74840804837995,2.6648780945253,5.06188168474565,12.5921138063066,3.15462165358238,3.42786084014347,2.54633791078818,3.57181818634493,2.48227378002213,2.61199789138935,7.1996590257033,9.40578052375397,17.2269589234506,12.0613358924541,6.24866574789078,11.9714754257516,7.30887376303799,4.6563407237614,2.54012269383853,3.69038872550742,0,3.46621943701529,4.65457007003779,2.24586291888606,15.9042019680025,7.813353445238,9.42342739152837,15.8822501768374,32.1031377930469,18.4493934151838,4.65818226509636,3.85232338634155,3.85448179539531,3.9119567217402,0.65407546914134,2.19686182734472,1.74986909166855,3.07970127575798,0,1.34226084846189,0,1.68046899571232,1.28629718017973,0.85960031981627,2.06268836910977,1.01158230429799,1.05798195854407,1.26766280701236,5.08266798103698,2.66788438833342,1.3498495759221,2.96659908770092,0.7104801149461,3.59520132622086,1.92109152660777,0.622137673850866,0.540023753326763,0.210324961351382,0.856952953211411,1.54607978666129,0.244981598429908,0.862609239164127,0,0,1.27687338085188,1.22885226604995,0.659431438650969,0.823388792421687,1.04182674111352,0,1.12552522006336,0.61119299110724,0.294628585473668,0.427115042397309,1.1183966749518,1.51452386666368,2.87171928405785,12.4641730141721,10.3250865237766,5.439770669662,8.09554787456726,7.79731700937203,11.2006721774334,7.02222100658759,2.04516387093669,2.59786004602869,1.7666978725517,2.81686839553361,2.56652954828636,5.09610479413291,0,4.76280290224671,6.58735650235256,5.05524445014783,7.53613606145796,2.07150306917737,4.60170631100957,4.3371331691534,3.34912026143355,2.7673859670727,3.61734337326294,4.23319345688537,5.6549966098354,12.3597483867187,8.53136205827479,17.6922110389975,7.117741397686,6.8460870722722,4.84875253135222,24.2309289583559,1.46390398505774,3.14170060220183,12.2619386500124,2.15667224110656,1.19980546198682,3.04968544975355,1.79748767285787,4.11750542536764,1.13088916901578,1.91206752211504,1.27857728665165,1.87009240103604,1.29793010454206,3.56437773476107,6.59356944233493,4.29628689337247,9.46988351489133,2.21204753036596,2.5289231487682,2.34080768746954,1.9591626318643,2.4493139694478,3.58718416797579,3.27956035959051,4.65666067330228,5.82033580918674,3.21480336285293,3.51902248327898,2.84954452155847,5.28289773528636,5.57203466435466,5.14455341019859,3.78165106955137,0,1.54408744268829,2.27330799516474,3.31401236056803,2.11073453982987,1.98068267607116,1.42046841351126,3.14822770795846,2.46827380619805,2.32533944750408,4.02410102099429,4.90414437942112,5.10135534731789,7.55170334763838,9.56611952641098,6.28659945928929,8.342904381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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:242406 | |||
|HGNC= | |||
|MCL_coexpression_id=789 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BHT7,uniprot:Q3TDM6 | |||
|association_with_transcript=0bp_to_ENSMUST00000107886,ENSMUST00000117140,NM_172866,uc008sqj.1_5end | |||
|cluster_id=chr4:43591581..43591644,+ | |||
|description=CAGE_peak_2_at_Rgp1_5end | |||
|id=chr4:43591581..43591644,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.03e-11!130;UBERON:0000925!1.03e-11!130;UBERON:0006595!1.03e-11!130;UBERON:0001007!7.66e-11!128;UBERON:0001555!7.66e-11!128;UBERON:0007026!7.66e-11!128;UBERON:0005409!2.55e-10!59;UBERON:0004921!3.23e-10!126;UBERON:0004185!3.23e-10!126;UBERON:0009854!1.48e-09!23;UBERON:0009856!1.48e-09!23;UBERON:0002107!6.44e-09!22;UBERON:0007499!6.44e-09!22;UBERON:0006925!6.44e-09!22;UBERON:0009497!6.44e-09!22;UBERON:0000015!6.44e-09!22;UBERON:0002423!6.44e-09!22;UBERON:0006235!6.44e-09!22;UBERON:0008835!6.44e-09!22;UBERON:0003894!6.44e-09!22;UBERON:0004161!6.44e-09!22;UBERON:0008836!6.44e-09!22;UBERON:0009569!7.93e-09!66;UBERON:0005172!1.28e-08!49;UBERON:0005173!1.28e-08!49;UBERON:0002417!1.28e-08!49;UBERON:0000916!1.28e-08!49;UBERON:0002365!1.81e-08!25;UBERON:0002330!1.81e-08!25;UBERON:0000160!3.21e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.85e-11,118;UBERON:0000925,1.85e-11,118;UBERON:0006595,1.85e-11,118;UBERON:0005409,3.88e-11,47;UBERON:0001007,1.37e-10,116;UBERON:0001555,1.37e-10,116;UBERON:0007026,1.37e-10,116;UBERON:0004921,5.72e-10,114;UBERON:0009854,1.47e-09,23;UBERON:0009856,1.47e-09,23;UBERON:0000160,2.38e-09,31;UBERON:0002100,4.60e-09,90;UBERON:0002107,6.38e-09,22;UBERON:0007499,6.38e-09,22;UBERON:0006925,6.38e-09,22;UBERON:0009497,6.38e-09,22;UBERON:0000015,6.38e-09,22;UBERON:0002423,6.38e-09,22;UBERON:0006235,6.38e-09,22;UBERON:0008835,6.38e-09,22;UBERON:0003894,6.38e-09,22;UBERON:0004161,6.38e-09,22;UBERON:0008836,6.38e-09,22;UBERON:0009569,7.86e-09,66;UBERON:0005177,8.44e-09,79;UBERON:0003104,1.27e-08,61;UBERON:0009142,1.27e-08,61;UBERON:0005172,1.27e-08,49;UBERON:0005173,1.27e-08,49;UBERON:0002417,1.27e-08,49;UBERON:0000916,1.27e-08,49;UBERON:0002365,1.80e-08,25;UBERON:0002330,1.80e-08,25;UBERON:0005256,1.90e-07,45 | |||
|phase1_expression=1.60148847104794,16.0528687514106,20.0199665331396,18.1478526784098,28.0501608769954,5.87577451691614,7.70921713965235,0.774739940649458,0.422366166455,0.936258105287974,0.856089841127525,0.8774937489487,1.71200729931206,1.74840804837995,2.6648780945253,5.06188168474565,12.5921138063066,3.15462165358238,3.42786084014347,2.54633791078818,3.57181818634493,2.48227378002213,2.61199789138935,7.1996590257033,9.40578052375397,17.2269589234506,12.0613358924541,6.24866574789078,11.9714754257516,7.30887376303799,4.6563407237614,2.54012269383853,3.69038872550742,0,3.46621943701529,4.65457007003779,2.24586291888606,15.9042019680025,7.813353445238,9.42342739152837,15.8822501768374,32.1031377930469,18.4493934151838,4.65818226509636,3.85232338634155,3.85448179539531,3.9119567217402,0.65407546914134,2.19686182734472,1.74986909166855,3.07970127575798,0,1.34226084846189,0,1.68046899571232,1.28629718017973,0.85960031981627,2.06268836910977,1.01158230429799,1.05798195854407,1.26766280701236,5.08266798103698,2.66788438833342,1.3498495759221,2.96659908770092,0.7104801149461,3.59520132622086,1.92109152660777,0.622137673850866,0.540023753326763,0.210324961351382,0.856952953211411,1.54607978666129,0.244981598429908,0.862609239164127,0,0,1.27687338085188,1.22885226604995,0.659431438650969,0.823388792421687,1.04182674111352,0,1.12552522006336,0.61119299110724,0.294628585473668,0.427115042397309,1.1183966749518,1.51452386666368,2.87171928405785,12.4641730141721,10.3250865237766,5.439770669662,8.09554787456726,7.79731700937203,11.2006721774334,7.02222100658759,2.04516387093669,2.59786004602869,1.7666978725517,2.81686839553361,2.56652954828636,5.09610479413291,0,4.76280290224671,6.58735650235256,5.05524445014783,7.53613606145796,2.07150306917737,4.60170631100957,4.3371331691534,3.34912026143355,2.7673859670727,3.61734337326294,4.23319345688537,5.6549966098354,12.3597483867187,8.53136205827479,17.6922110389975,7.117741397686,6.8460870722722,4.84875253135222,24.2309289583559,1.46390398505774,3.14170060220183,12.2619386500124,2.15667224110656,1.19980546198682,3.04968544975355,1.79748767285787,4.11750542536764,1.13088916901578,1.91206752211504,1.27857728665165,1.87009240103604,1.29793010454206,3.56437773476107,6.59356944233493,4.29628689337247,9.46988351489133,2.21204753036596,2.5289231487682,2.34080768746954,1.9591626318643,2.4493139694478,3.58718416797579,3.27956035959051,4.65666067330228,5.82033580918674,3.21480336285293,3.51902248327898,2.84954452155847,5.28289773528636,5.57203466435466,5.14455341019859,3.78165106955137,0,1.54408744268829,2.27330799516474,3.31401236056803,2.11073453982987,1.98068267607116,1.42046841351126,3.14822770795846,2.46827380619805,2.32533944750408,4.02410102099429,4.90414437942112,5.10135534731789,7.55170334763838,9.56611952641098,6.28659945928929,8.34290438105992,7.91817870686193,2.3131894342054,1.13195073617213,26.7639214216876,12.6936271998501,4.26576501070468,3.94802342162745,3.22168653305233,5.04208811558356,6.22658522765637,7.79925067061493,16.6085171540579,6.42325923423642,4.52403375840485,10.1467800740987,9.94316844307513,12.5834717211591,12.9682829924817,15.1347367673319,3.41402221715547,3.77020091612105,5.63538678365402,4.07302655690629,2.71533482034676,6.31222379012867,7.8413306034079,7.82333784291891,8.63493003127561,8.63780147452604,10.3758419480502,8.3422552858047,8.45203678986773,8.31989815823959,9.73728582664814,11.0941493486112,10.4396599230382,8.63088412352432,6.97181475132652,6.86403532970204,5.75072826109418,8.93138274404408,5.92871578917665,8.84026072814891,8.61107584905178,8.68398338454061,4.61882975416512,1.51593129416388,3.58522948172457,2.37643120085263,2.81628297946203,5.69521275302174,6.18913466303636,7.02481132288076,5.99013547603526,4.87222317227305,6.218735977642,4.26044618260919,4.66249451037918,6.219909519005,3.01582567878545,2.71952841909355,2.95058563811422,4.96686143348518,1.28440471990234,1.99259867206745,4.26230857979356,4.54447668967871,2.52406575533005,1.56175497718655,1.07711698866399,3.34556317133573,1.78238939265915,2.54768877709949,2.02405350837447,2.63030272120181,2.37172666767914,0.963963949265421,7.09700426041343,3.38324646967785,4.56083486190013,8.24850614862677,2.65490276679926,1.94224508923985,3.62788268357701,3.58349651536206,6.20133975049623,3.07435147943927,5.68542244970086,5.45300594216258,4.63446591900138,4.10847785316561,7.37930260024991,6.18813259489121,4.42571487479924,2.52085531643834,1.94038025674132,2.7863814554107,4.96552654198366,4.28085162244969,3.45552943264454,3.95804433848979,10.7948985709307,13.9809166770121,6.61585194164886,11.7069239588451,10.172258881842,8.50412241486998,10.1466492402666,10.9974402829191,13.699599321603,0.741701208042039,3.75915937755276,2.88941615148511,4.8150577116125,6.40452753815949,7.51818252465638,6.40578884978263,7.81900777971734,5.45810664062266,6.90999869022119,11.4560474161814,5.3777118908793,3.86306987541013,4.53622431451565,2.92723614420256,6.11415178489297,6.74321731924104,8.84391976261094,8.899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| |||
|short_description=p2@Rgp1 | |||
}} |
Revision as of 12:03, 5 August 2015
Short description: | p2@Rgp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rgp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:789 |
Association with transcript: | 0bp_to_ENSMUST00000107886, ENSMUST00000117140, NM_172866, uc008sqj.1_5end |
EntrezGene: | 242406 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.85e-11 | 118 |
endoderm | 1.85e-11 | 118 |
presumptive endoderm | 1.85e-11 | 118 |
gastrointestinal system | 3.88e-11 | 47 |
digestive system | 1.37e-10 | 116 |
digestive tract | 1.37e-10 | 116 |
primitive gut | 1.37e-10 | 116 |
subdivision of digestive tract | 5.72e-10 | 114 |
digestive tract diverticulum | 1.47e-09 | 23 |
sac | 1.47e-09 | 23 |
intestine | 2.38e-09 | 31 |
trunk | 4.60e-09 | 90 |
liver | 6.38e-09 | 22 |
epithelial sac | 6.38e-09 | 22 |
digestive gland | 6.38e-09 | 22 |
epithelium of foregut-midgut junction | 6.38e-09 | 22 |
anatomical boundary | 6.38e-09 | 22 |
hepatobiliary system | 6.38e-09 | 22 |
foregut-midgut junction | 6.38e-09 | 22 |
hepatic diverticulum | 6.38e-09 | 22 |
liver primordium | 6.38e-09 | 22 |
septum transversum | 6.38e-09 | 22 |
liver bud | 6.38e-09 | 22 |
subdivision of trunk | 7.86e-09 | 66 |
trunk region element | 8.44e-09 | 79 |
mesenchyme | 1.27e-08 | 61 |
entire embryonic mesenchyme | 1.27e-08 | 61 |
abdomen element | 1.27e-08 | 49 |
abdominal segment element | 1.27e-08 | 49 |
abdominal segment of trunk | 1.27e-08 | 49 |
abdomen | 1.27e-08 | 49 |
exocrine gland | 1.80e-08 | 25 |
exocrine system | 1.80e-08 | 25 |
trunk mesenchyme | 1.90e-07 | 45 |