FFCP PHASE1:Mm9::chr1:193101494..193101507,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:193101494..193101507,-|id=chr1:193101494..193101507,-|ontology_enrichment_celltype=CL:0000066!1.68e-19!25;CL:0002563!2.46e-19!9;CL:0002251!2.46e-19!9;CL:0000223!2.37e-16!20;CL:0000239!1.15e-13!6;CL:0000677!1.15e-13!6;CL:0000212!1.15e-13!6;CL:0000584!1.15e-13!6;CL:0002076!3.15e-13!15;CL:0000063!8.38e-12!66;CL:0000075!1.39e-11!7;CL:0000473!2.51e-07!3;CL:0000627!2.51e-07!3;CL:0000682!2.51e-07!3;CL:0000144!2.86e-07!121;CL:0000012!2.86e-07!121;CL:0002250!3.04e-07!3;CL:0002371!6.93e-07!118|ontology_enrichment_celltype_v019_2=CL:0000066,1.33e-32,25;CL:0002563,3.72e-31,9;CL:0002251,3.72e-31,9;CL:0000239,9.97e-27,6;CL:0000677,9.97e-27,6;CL:0000584,9.97e-27,6;CL:0000223,2.01e-25,20;CL:0000075,7.37e-23,7;CL:0002076,2.57e-18,15;CL:0000682,1.51e-13,3;CL:0000182,1.82e-08,5;CL:0002250,5.99e-07,3|ontology_enrichment_disease=DOID:0060100!3.51e-07!3;DOID:4045!3.51e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,8.98e-07,3;DOID:4045,8.98e-07,3|ontology_enrichment_uberon=UBERON:0003350!2.46e-19!9;UBERON:0004808!2.46e-19!9;UBERON:0001277!2.46e-19!9;UBERON:0000485!1.86e-15!11;UBERON:0001242!8.97e-13!13;UBERON:0000060!8.97e-13!13;UBERON:0001262!8.97e-13!13;UBERON:0004786!8.97e-13!13;UBERON:0000344!8.26e-11!15;UBERON:0004923!2.50e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.72e-31,9;UBERON:0004808,3.72e-31,9;UBERON:0001277,3.72e-31,9;UBERON:0000485,2.52e-25,11;UBERON:0001242,2.77e-21,13;UBERON:0001262,2.77e-21,13;UBERON:0004786,2.77e-21,13;UBERON:0000344,2.57e-18,15;UBERON:0004923,4.53e-11,24;UBERON:0000490,2.36e-09,66;UBERON:0000160,2.46e-08,31;UBERON:0003929,3.75e-08,55|phase1_expression=0,3.48975407639361,3.18499467572675,7.25914107136392,13.5241847085514,1.51091344720701,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0.42438965179803,0,0,0,0,0,2.29692785646008,1.7230479846363,1.50829862880122,0,0,0,0,0,0,2.59966457776147,0.498703936075477,3.26670970019791,2.92972141515835,1.5626706890476,0.523523743973798,184.704687241738,12.294818729252,3.88408282424923,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79728977403356,0,2.03991400112325,1.07940638327563,0,0,0,0,0,0,0,0,0,0,0,0.506719730950197,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0.568326998791185,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0.8244312647074,0,0.0603129249281559,0.358117032009409,1.31312719796049,0,0,0,0,0,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:193101494..193101507,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:193101494..193101507,- | |||
|description=CAGE_peak_at_chr1:193101494..193101507,- | |||
|id=chr1:193101494..193101507,- | |||
|ontology_enrichment_celltype=CL:0000066!1.68e-19!25;CL:0002563!2.46e-19!9;CL:0002251!2.46e-19!9;CL:0000223!2.37e-16!20;CL:0000239!1.15e-13!6;CL:0000677!1.15e-13!6;CL:0000212!1.15e-13!6;CL:0000584!1.15e-13!6;CL:0002076!3.15e-13!15;CL:0000063!8.38e-12!66;CL:0000075!1.39e-11!7;CL:0000473!2.51e-07!3;CL:0000627!2.51e-07!3;CL:0000682!2.51e-07!3;CL:0000144!2.86e-07!121;CL:0000012!2.86e-07!121;CL:0002250!3.04e-07!3;CL:0002371!6.93e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.33e-32,25;CL:0002563,3.72e-31,9;CL:0002251,3.72e-31,9;CL:0000239,9.97e-27,6;CL:0000677,9.97e-27,6;CL:0000584,9.97e-27,6;CL:0000223,2.01e-25,20;CL:0000075,7.37e-23,7;CL:0002076,2.57e-18,15;CL:0000682,1.51e-13,3;CL:0000182,1.82e-08,5;CL:0002250,5.99e-07,3 | |||
|ontology_enrichment_disease=DOID:0060100!3.51e-07!3;DOID:4045!3.51e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.98e-07,3;DOID:4045,8.98e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003350!2.46e-19!9;UBERON:0004808!2.46e-19!9;UBERON:0001277!2.46e-19!9;UBERON:0000485!1.86e-15!11;UBERON:0001242!8.97e-13!13;UBERON:0000060!8.97e-13!13;UBERON:0001262!8.97e-13!13;UBERON:0004786!8.97e-13!13;UBERON:0000344!8.26e-11!15;UBERON:0004923!2.50e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.72e-31,9;UBERON:0004808,3.72e-31,9;UBERON:0001277,3.72e-31,9;UBERON:0000485,2.52e-25,11;UBERON:0001242,2.77e-21,13;UBERON:0001262,2.77e-21,13;UBERON:0004786,2.77e-21,13;UBERON:0000344,2.57e-18,15;UBERON:0004923,4.53e-11,24;UBERON:0000490,2.36e-09,66;UBERON:0000160,2.46e-08,31;UBERON:0003929,3.75e-08,55 | |||
|phase1_expression=0,3.48975407639361,3.18499467572675,7.25914107136392,13.5241847085514,1.51091344720701,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0.274228867211478,0.42438965179803,0,0,0,0,0,2.29692785646008,1.7230479846363,1.50829862880122,0,0,0,0,0,0,2.59966457776147,0.498703936075477,3.26670970019791,2.92972141515835,1.5626706890476,0.523523743973798,184.704687241738,12.294818729252,3.88408282424923,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79728977403356,0,2.03991400112325,1.07940638327563,0,0,0,0,0,0,0,0,0,0,0,0.506719730950197,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508280908292259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0.568326998791185,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0.220528398054962,0.8244312647074,0,0.0603129249281559,0.358117032009409,1.31312719796049,0,0,0,0,0,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0.443971906748129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:193101494..193101507,- | |||
}} |
Latest revision as of 12:14, 5 August 2015
Short description: | p@chr1:193101494..193101507, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:193101494..193101507, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.33e-32 | 25 |
intestinal epithelial cell | 3.72e-31 | 9 |
epithelial cell of alimentary canal | 3.72e-31 | 9 |
brush border epithelial cell | 9.97e-27 | 6 |
gut absorptive cell | 9.97e-27 | 6 |
enterocyte | 9.97e-27 | 6 |
endodermal cell | 2.01e-25 | 20 |
columnar/cuboidal epithelial cell | 7.37e-23 | 7 |
endo-epithelial cell | 2.57e-18 | 15 |
M cell of gut | 1.51e-13 | 3 |
hepatocyte | 1.82e-08 | 5 |
intestinal crypt stem cell | 5.99e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.72e-31 | 9 |
gastrointestinal system epithelium | 3.72e-31 | 9 |
intestinal epithelium | 3.72e-31 | 9 |
simple columnar epithelium | 2.52e-25 | 11 |
intestinal mucosa | 2.77e-21 | 13 |
wall of intestine | 2.77e-21 | 13 |
gastrointestinal system mucosa | 2.77e-21 | 13 |
mucosa | 2.57e-18 | 15 |
organ component layer | 4.53e-11 | 24 |
unilaminar epithelium | 2.36e-09 | 66 |
intestine | 2.46e-08 | 31 |
gut epithelium | 3.75e-08 | 55 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.98e-07 | 3 |
muscle cancer | 8.98e-07 | 3 |