FFCP PHASE1:Mm9::chr11:116485552..116485570,-: Difference between revisions
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{{FFCP|EntrezGene=217344|HGNC=|UniProt=Q80WQ6,Q8BJ16|association_with_transcript=0bp_to_ENSMUST00000126819,NM_001167680,uc007mls.2,uc007mlu.2_5end|description=CAGE_peak_2_at_Rhbdf2_5end|id=chr11:116485552..116485570,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.10e-14!130;UBERON:0000925!2.10e-14!130;UBERON:0006595!2.10e-14!130;UBERON:0001007!5.06e-14!128;UBERON:0001555!5.06e-14!128;UBERON:0007026!5.06e-14!128;UBERON:0004921!3.52e-13!126;UBERON:0004185!3.52e-13!126;UBERON:0000926!6.92e-11!193;UBERON:0004120!6.92e-11!193;UBERON:0006603!6.92e-11!193;UBERON:0000466!2.97e-08!79;UBERON:0003104!1.16e-07!131;UBERON:0009142!1.16e-07!131;UBERON:0000077!1.59e-07!97;UBERON:0002405!1.97e-07!70;UBERON:0000160!4.74e-07!43;UBERON:0005409!8.22e-07!59;UBERON:0002100!8.68e-07!98;UBERON:0004923!9.34e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.32e-13,118;UBERON:0000925,7.32e-13,118;UBERON:0006595,7.32e-13,118;UBERON:0001007,1.66e-12,116;UBERON:0001555,1.66e-12,116;UBERON:0007026,1.66e-12,116;UBERON:0004921,1.05e-11,114;UBERON:0002100,1.56e-09,90;UBERON:0005177,1.89e-07,79;UBERON:0004923,9.08e-07,24|phase1_expression=2.5623815536767,18.8446720125255,17.2899710968024,16.3330674105688,25.0447864973174,12.7588246653036,16.1192722010913,3.22808308603941,9.29205566201001,8.89445200023575,5.47897498321616,4.62678522172951,4.10881751834894,5.33264454755884,5.3297561890506,7.08663435864391,6.29605690315332,13.4071420277251,16.7279608999001,7.63901373236454,3.82694805679814,4.26951090163807,3.91799683708403,12.7993938234725,12.6175104586944,15.5042630311055,13.7843838770904,12.4973314957816,8.17100703662408,5.79669298447841,7.09537634096975,18.4158895303293,23.3724619282137,15.8481681015439,5.48818077527422,4.82080471539628,3.06254034393554,28.4601508901097,7.813353445238,18.3233310390829,29.4115744015507,35.5183652178392,22.8189865924642,10.9530231638752,11.2528393653661,7.89251034295231,0.782391344348039,1.74420125104357,1.75748946187577,1.1665793944457,2.51975558925653,1.43752564364972,8.55691290894455,3.62681071005672,4.03312558970957,3.34437266846731,4.87106847895886,5.67239301505187,0.202316460859598,0,0,2.03306719241479,2.66788438833342,29.2467408116455,35.5991890524111,36.2344858622511,10.7856039786626,9.22123932771731,0.414758449233911,0.270011876663381,0.420649922702764,0.571301968807607,1.10434270475807,0.122490799214954,0,0.919218786610021,0,0.383062014255563,0.46081959976873,0.527545150920775,0.274462930807229,0,0.279182999001381,0,0.15279824777681,0.589257170947335,0.996601765593721,0.931997229126503,1.96888102666279,0.982430281388212,11.8844440367688,0.860423876981386,30.5987100168488,5.39703191637817,6.49776417447669,6.72040330646003,5.19644354487482,1.36344258062446,0.519572009205738,1.7666978725517,5.7745802108439,0,0,14.2213340630666,6.71122227134764,9.88103475352884,8.08839112023653,8.33542321949138,18.9024655062435,6.38301197978747,1.73485326766136,5.78484408793068,5.30415643688935,4.37095657602605,4.8211369925639,4.90099706185734,11.6181634835156,6.36237170447611,12.3845477272982,3.39710384889559,8.61281921995535,3.87900202508178,5.59175283654366,0.292780797011547,1.67557365450764,12.0064815948038,3.47463861067169,3.59941638596045,4.57452817463033,1.64769703345305,0,0.125654352112864,0.521472960576829,0.511430914660661,0.41557608911912,0.324482526135515,3.66621709861139,10.2013715900276,3.79084137650512,7.36546495602659,2.34216797332867,0.919608417733892,1.62055916824814,2.10986744970001,2.10913147369116,2.17793324484245,3.09215691047105,6.20888089773638,2.37124792226126,1.89106080167819,2.11141348996739,2.41115305670332,3.33656699070717,3.83077383174383,5.35033554660653,4.97585667046233,3.51106593656617,3.60287069960601,7.10408748488982,4.34964122324554,3.51789089971644,4.14142741360334,3.55117103377815,3.34499193970586,4.16521204795921,3.72054311600653,3.48755421819505,3.73649095574942,4.27855609775049,5.41752631461014,4.53985333456792,5.11699955988663,6.80605357402257,6.1734952629771,0.420579897128254,1.02904612379284,16.5209391491899,13.7514294665043,1.49301775374664,2.09013004674395,5.15469845288373,7.46229041106367,8.67274370994994,6.27744566171445,12.8122846617018,6.91735609840846,5.27803938480566,7.56034593756373,8.77338392036041,14.3811105384675,7.78096979548899,9.75792238946399,3.03468641524931,5.36968009265725,1.1270773567308,3.66572390121566,4.07300223052014,5.33032231166421,4.99568643281633,6.05201606716369,5.02395929092399,5.92306386824642,5.92905254174298,5.83957870006329,5.50365186316968,10.3436571697033,9.73728582664814,9.88826354984909,6.3656462945355,11.7955416354832,8.2688965655268,5.49122826376163,7.18841032636773,10.0478055870496,6.55279113540577,9.34541848404313,6.09951205974501,7.71909634181387,12.9327233116623,1.32643988239339,4.56301934037672,4.92260748748046,6.57132695207806,14.2380318825543,11.6641384034147,14.2447562936193,10.0886492227962,9.74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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:217344 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80WQ6,uniprot:Q8BJ16 | |||
|association_with_transcript=0bp_to_ENSMUST00000126819,NM_001167680,uc007mls.2,uc007mlu.2_5end | |||
|cluster_id=chr11:116485552..116485570,- | |||
|description=CAGE_peak_2_at_Rhbdf2_5end | |||
|id=chr11:116485552..116485570,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.10e-14!130;UBERON:0000925!2.10e-14!130;UBERON:0006595!2.10e-14!130;UBERON:0001007!5.06e-14!128;UBERON:0001555!5.06e-14!128;UBERON:0007026!5.06e-14!128;UBERON:0004921!3.52e-13!126;UBERON:0004185!3.52e-13!126;UBERON:0000926!6.92e-11!193;UBERON:0004120!6.92e-11!193;UBERON:0006603!6.92e-11!193;UBERON:0000466!2.97e-08!79;UBERON:0003104!1.16e-07!131;UBERON:0009142!1.16e-07!131;UBERON:0000077!1.59e-07!97;UBERON:0002405!1.97e-07!70;UBERON:0000160!4.74e-07!43;UBERON:0005409!8.22e-07!59;UBERON:0002100!8.68e-07!98;UBERON:0004923!9.34e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.32e-13,118;UBERON:0000925,7.32e-13,118;UBERON:0006595,7.32e-13,118;UBERON:0001007,1.66e-12,116;UBERON:0001555,1.66e-12,116;UBERON:0007026,1.66e-12,116;UBERON:0004921,1.05e-11,114;UBERON:0002100,1.56e-09,90;UBERON:0005177,1.89e-07,79;UBERON:0004923,9.08e-07,24 | |||
|phase1_expression=2.5623815536767,18.8446720125255,17.2899710968024,16.3330674105688,25.0447864973174,12.7588246653036,16.1192722010913,3.22808308603941,9.29205566201001,8.89445200023575,5.47897498321616,4.62678522172951,4.10881751834894,5.33264454755884,5.3297561890506,7.08663435864391,6.29605690315332,13.4071420277251,16.7279608999001,7.63901373236454,3.82694805679814,4.26951090163807,3.91799683708403,12.7993938234725,12.6175104586944,15.5042630311055,13.7843838770904,12.4973314957816,8.17100703662408,5.79669298447841,7.09537634096975,18.4158895303293,23.3724619282137,15.8481681015439,5.48818077527422,4.82080471539628,3.06254034393554,28.4601508901097,7.813353445238,18.3233310390829,29.4115744015507,35.5183652178392,22.8189865924642,10.9530231638752,11.2528393653661,7.89251034295231,0.782391344348039,1.74420125104357,1.75748946187577,1.1665793944457,2.51975558925653,1.43752564364972,8.55691290894455,3.62681071005672,4.03312558970957,3.34437266846731,4.87106847895886,5.67239301505187,0.202316460859598,0,0,2.03306719241479,2.66788438833342,29.2467408116455,35.5991890524111,36.2344858622511,10.7856039786626,9.22123932771731,0.414758449233911,0.270011876663381,0.420649922702764,0.571301968807607,1.10434270475807,0.122490799214954,0,0.919218786610021,0,0.383062014255563,0.46081959976873,0.527545150920775,0.274462930807229,0,0.279182999001381,0,0.15279824777681,0.589257170947335,0.996601765593721,0.931997229126503,1.96888102666279,0.982430281388212,11.8844440367688,0.860423876981386,30.5987100168488,5.39703191637817,6.49776417447669,6.72040330646003,5.19644354487482,1.36344258062446,0.519572009205738,1.7666978725517,5.7745802108439,0,0,14.2213340630666,6.71122227134764,9.88103475352884,8.08839112023653,8.33542321949138,18.9024655062435,6.38301197978747,1.73485326766136,5.78484408793068,5.30415643688935,4.37095657602605,4.8211369925639,4.90099706185734,11.6181634835156,6.36237170447611,12.3845477272982,3.39710384889559,8.61281921995535,3.87900202508178,5.59175283654366,0.292780797011547,1.67557365450764,12.0064815948038,3.47463861067169,3.59941638596045,4.57452817463033,1.64769703345305,0,0.125654352112864,0.521472960576829,0.511430914660661,0.41557608911912,0.324482526135515,3.66621709861139,10.2013715900276,3.79084137650512,7.36546495602659,2.34216797332867,0.919608417733892,1.62055916824814,2.10986744970001,2.10913147369116,2.17793324484245,3.09215691047105,6.20888089773638,2.37124792226126,1.89106080167819,2.11141348996739,2.41115305670332,3.33656699070717,3.83077383174383,5.35033554660653,4.97585667046233,3.51106593656617,3.60287069960601,7.10408748488982,4.34964122324554,3.51789089971644,4.14142741360334,3.55117103377815,3.34499193970586,4.16521204795921,3.72054311600653,3.48755421819505,3.73649095574942,4.27855609775049,5.41752631461014,4.53985333456792,5.11699955988663,6.80605357402257,6.1734952629771,0.420579897128254,1.02904612379284,16.5209391491899,13.7514294665043,1.49301775374664,2.09013004674395,5.15469845288373,7.46229041106367,8.67274370994994,6.27744566171445,12.8122846617018,6.91735609840846,5.27803938480566,7.56034593756373,8.77338392036041,14.3811105384675,7.78096979548899,9.75792238946399,3.03468641524931,5.36968009265725,1.1270773567308,3.66572390121566,4.07300223052014,5.33032231166421,4.99568643281633,6.05201606716369,5.02395929092399,5.92306386824642,5.92905254174298,5.83957870006329,5.50365186316968,10.3436571697033,9.73728582664814,9.88826354984909,6.3656462945355,11.7955416354832,8.2688965655268,5.49122826376163,7.18841032636773,10.0478055870496,6.55279113540577,9.34541848404313,6.09951205974501,7.71909634181387,12.9327233116623,1.32643988239339,4.56301934037672,4.92260748748046,6.57132695207806,14.2380318825543,11.6641384034147,14.2447562936193,10.0886492227962,9.7444463445461,11.799652880654,8.52089236521838,13.1240586218081,13.5970115066621,21.1107797514981,21.2123216689297,9.83528546038072,14.9005843004556,1.12385412991454,0.820481806145422,1.47541450839008,8.58401152494868,2.52406575533005,1.56175497718655,0.215423397732799,2.62865677747807,3.56477878531831,4.81230102341015,2.42886421004937,2.92255857911312,4.34816555741176,0,13.3423680095772,3.91744328067962,4.0721739838394,9.56826713240706,13.2745138339963,4.12727081463468,3.62788268357701,5.65815239267694,5.31543407185391,4.91896236710284,5.94385074286909,9.08834323693764,7.48644494607915,7.26884543252377,8.4334886859999,13.4076206222643,3.06395645178409,0.900305470156551,2.71653235943784,4.92975180572662,1.77340233642274,1.78368817602071,2.63278432963394,3.95804433848979,6.57080782578389,7.20229040936989,6.83638033970382,12.036696464728,9.04200789497071,9.46912921372047,13.2503301843481,12.8029901801148,9.61886760878507,0.556275906031529,10.423123728669,4.95328483111734,9.81530995059472,7.15800136617826,10.3887613067979,8.23601423543482,4.24946074984638,5.318155188299,6.49539876880792,6.68269432610579,2.84702394223022,3.04979200690273,4.21220829205025,5.01811910434725,3.05707589244649,2.83215127408124,5.62043498932284,5.496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| |||
|short_description=p2@Rhbdf2 | |||
}} |
Revision as of 12:16, 5 August 2015
Short description: | p2@Rhbdf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rhbdf2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000126819, NM_001167680, uc007mls.2, uc007mlu.2_5end |
EntrezGene: | 217344 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.32e-13 | 118 |
endoderm | 7.32e-13 | 118 |
presumptive endoderm | 7.32e-13 | 118 |
digestive system | 1.66e-12 | 116 |
digestive tract | 1.66e-12 | 116 |
primitive gut | 1.66e-12 | 116 |
subdivision of digestive tract | 1.05e-11 | 114 |
trunk | 1.56e-09 | 90 |
trunk region element | 1.89e-07 | 79 |
organ component layer | 9.08e-07 | 24 |