FFCP PHASE1:Mm9::chr9:65756830..65756890,+: Difference between revisions
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{{FFCP|EntrezGene=214897|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000124688,ENSMUST00000130798_5end|description=CAGE_peak_1_at_Csnk1g1_5end|id=chr9:65756830..65756890,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002780!2.62e-08!39;UBERON:0001890!2.62e-08!39;UBERON:0006240!2.62e-08!39;UBERON:0003080!4.22e-08!40;UBERON:0003056!1.35e-07!49;UBERON:0002791!2.08e-07!29;UBERON:0003528!2.08e-07!29;UBERON:0001893!2.08e-07!29;UBERON:0000955!5.14e-07!50;UBERON:0006238!5.14e-07!50;UBERON:0002616!7.85e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.62e-08,39;UBERON:0001890,2.62e-08,39;UBERON:0006240,2.62e-08,39;UBERON:0003080,4.22e-08,40;UBERON:0003056,1.35e-07,49;UBERON:0003528,2.08e-07,29;UBERON:0002791,2.08e-07,29;UBERON:0001893,2.08e-07,29;UBERON:0000955,2.17e-07,47;UBERON:0006238,2.17e-07,47;UBERON:0002616,3.33e-07,46;UBERON:0010371,5.49e-07,73|phase1_expression=7.68714466103011,16.40184415905,18.654968814971,24.4996011158532,25.5456822272637,13.0945832091274,14.2503710763271,6.71441281896197,5.490760163915,6.55380673701582,6.50628279256919,5.10541817570153,4.28001824828014,4.89554253546385,1.66554880907831,3.23960427823721,1.39912375625629,4.57420139769445,3.56497527374921,2.12194825899015,7.313722952992,5.56029326724958,6.00759515019551,14.5593104742,10.5528269290898,8.03924749761028,8.18447792702242,12.7128027284675,13.3016393619462,8.56902441183765,9.3126814475228,8.89042942843484,10.4561013889377,0,8.08784535303569,6.64938581433969,11.0251452381679,9.20769587621197,9.37602413428561,5.23523743973798,5.29408339227913,9.56263678941824,7.76816564849846,10.5753327099485,9.22530074097583,11.0128051297009,1.56478268869608,2.39827672018491,4.39372365468944,6.41618666945135,6.29938897314131,1.43752564364972,1.8456086666351,6.5282592781021,2.68875039313971,6.94600477297057,12.0344044774278,11.8604581223812,11.5320382689971,9.52183762689659,8.23980824558033,5.76035704517525,3.55717918444456,0.449949858640699,1.97773272513395,0.7104801149461,2.39680088414724,1.92109152660777,10.9910989046986,9.45041568321835,9.88527318351495,6.28432165688368,3.53389665522582,12.2490799214954,10.7346927540425,11.9498442259303,7.70811166995721,8.81042632787795,9.98442466165583,14.7712642257817,13.174220678747,9.37644067002168,6.14202597803038,7.87867654044352,10.8486755921535,9.1334861496837,8.11518580554887,15.4711540034999,5.52801211332244,7.02815508993105,11.3047150593654,8.60423876981386,1.3599426674155,1.61910957491345,3.24888208723835,2.68816132258401,4.63466586434781,8.862376774059,4.41636207824877,3.88673531961374,8.59144860637751,21.815501160434,7.64415719119937,14.2213340630666,11.4740251735943,11.1478340809043,7.58286667522175,6.8510327831436,14.2415836005944,7.71899123137089,6.7659277438793,9.43842982767638,7.37969591219387,7.53613202763113,11.9940481278419,5.40366342717605,5.6854842578906,9.39895819979426,5.30766331169925,8.41187619726528,5.74187947997023,8.24287930329878,5.59175283654366,16.9812862266697,22.8296910426666,9.70736809792647,5.51149572727233,3.59941638596045,4.06624726633807,8.53806644607489,15.0975198930147,12.942398267625,16.1656617778817,17.9000820131231,11.2205544062162,13.1415423084884,9.77657892963036,7.96204611904595,10.6143558542143,7.78634866779954,9.62891277924007,5.0578462975364,9.36323074987816,13.1113191517072,10.4095843701532,11.1458936647819,8.24575176125614,10.3481348295606,6.25147179505242,10.0226222488944,10.0292140773451,5.91828477554452,9.73165372289593,9.75106066262066,11.1122353660289,10.7478504081986,6.31991868581911,3.60287069960601,4.26245249093389,8.07790512888457,8.20841209933837,9.18316513451176,9.46978942340841,11.8058539048442,10.0273623376796,10.6965614585188,11.8040296615832,11.6765342367169,8.22799249567402,7.38753588355929,10.4578764314154,10.3801991071986,8.34290438105992,8.72341721942416,16.6129059365661,15.8473103064098,12.2254949704005,13.2225283331772,7.89166526980366,11.3795969211615,8.24751752461397,9.27744213267376,7.78323153457046,5.51654315726422,6.64340686162316,5.59976446061637,9.0480675168097,9.15199771389294,9.35827618171777,3.59527763461689,9.07779809473716,10.7536287557358,4.74169752382704,12.3388393618507,7.88954149711563,12.6263823264095,9.30971938404604,10.3099655238768,8.41045943752622,9.15182917473533,8.16393384775149,6.91024117962083,3.85388415213294,4.50481785433454,3.34150291692445,2.47348323623339,4.66578279193557,3.37648023653384,2.80088436959562,2.87696137450811,3.72911021582581,3.56929837144506,12.9391385874619,6.69853705803306,7.80094182786401,6.31447194867779,3.76734568396016,2.8946611281802,10.5309318394965,6.44270800019648,7.65935389277522,11.712410918488,14.7854856421756,11.3904255060435,8.56957107189649,11.3177515757523,13.24135210492,11.5161638617363,13.7131101045439,12.2897486036803,8.28887912956299,12.2951699794285,9.04747703635634,2.71952841909355,9.83528546038072,8.55403913544671,7.86697890940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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:214897 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000124688,ENSMUST00000130798_5end | |||
|cluster_id=chr9:65756830..65756890,+ | |||
|description=CAGE_peak_1_at_Csnk1g1_5end | |||
|id=chr9:65756830..65756890,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!2.62e-08!39;UBERON:0001890!2.62e-08!39;UBERON:0006240!2.62e-08!39;UBERON:0003080!4.22e-08!40;UBERON:0003056!1.35e-07!49;UBERON:0002791!2.08e-07!29;UBERON:0003528!2.08e-07!29;UBERON:0001893!2.08e-07!29;UBERON:0000955!5.14e-07!50;UBERON:0006238!5.14e-07!50;UBERON:0002616!7.85e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.62e-08,39;UBERON:0001890,2.62e-08,39;UBERON:0006240,2.62e-08,39;UBERON:0003080,4.22e-08,40;UBERON:0003056,1.35e-07,49;UBERON:0003528,2.08e-07,29;UBERON:0002791,2.08e-07,29;UBERON:0001893,2.08e-07,29;UBERON:0000955,2.17e-07,47;UBERON:0006238,2.17e-07,47;UBERON:0002616,3.33e-07,46;UBERON:0010371,5.49e-07,73 | |||
|phase1_expression=7.68714466103011,16.40184415905,18.654968814971,24.4996011158532,25.5456822272637,13.0945832091274,14.2503710763271,6.71441281896197,5.490760163915,6.55380673701582,6.50628279256919,5.10541817570153,4.28001824828014,4.89554253546385,1.66554880907831,3.23960427823721,1.39912375625629,4.57420139769445,3.56497527374921,2.12194825899015,7.313722952992,5.56029326724958,6.00759515019551,14.5593104742,10.5528269290898,8.03924749761028,8.18447792702242,12.7128027284675,13.3016393619462,8.56902441183765,9.3126814475228,8.89042942843484,10.4561013889377,0,8.08784535303569,6.64938581433969,11.0251452381679,9.20769587621197,9.37602413428561,5.23523743973798,5.29408339227913,9.56263678941824,7.76816564849846,10.5753327099485,9.22530074097583,11.0128051297009,1.56478268869608,2.39827672018491,4.39372365468944,6.41618666945135,6.29938897314131,1.43752564364972,1.8456086666351,6.5282592781021,2.68875039313971,6.94600477297057,12.0344044774278,11.8604581223812,11.5320382689971,9.52183762689659,8.23980824558033,5.76035704517525,3.55717918444456,0.449949858640699,1.97773272513395,0.7104801149461,2.39680088414724,1.92109152660777,10.9910989046986,9.45041568321835,9.88527318351495,6.28432165688368,3.53389665522582,12.2490799214954,10.7346927540425,11.9498442259303,7.70811166995721,8.81042632787795,9.98442466165583,14.7712642257817,13.174220678747,9.37644067002168,6.14202597803038,7.87867654044352,10.8486755921535,9.1334861496837,8.11518580554887,15.4711540034999,5.52801211332244,7.02815508993105,11.3047150593654,8.60423876981386,1.3599426674155,1.61910957491345,3.24888208723835,2.68816132258401,4.63466586434781,8.862376774059,4.41636207824877,3.88673531961374,8.59144860637751,21.815501160434,7.64415719119937,14.2213340630666,11.4740251735943,11.1478340809043,7.58286667522175,6.8510327831436,14.2415836005944,7.71899123137089,6.7659277438793,9.43842982767638,7.37969591219387,7.53613202763113,11.9940481278419,5.40366342717605,5.6854842578906,9.39895819979426,5.30766331169925,8.41187619726528,5.74187947997023,8.24287930329878,5.59175283654366,16.9812862266697,22.8296910426666,9.70736809792647,5.51149572727233,3.59941638596045,4.06624726633807,8.53806644607489,15.0975198930147,12.942398267625,16.1656617778817,17.9000820131231,11.2205544062162,13.1415423084884,9.77657892963036,7.96204611904595,10.6143558542143,7.78634866779954,9.62891277924007,5.0578462975364,9.36323074987816,13.1113191517072,10.4095843701532,11.1458936647819,8.24575176125614,10.3481348295606,6.25147179505242,10.0226222488944,10.0292140773451,5.91828477554452,9.73165372289593,9.75106066262066,11.1122353660289,10.7478504081986,6.31991868581911,3.60287069960601,4.26245249093389,8.07790512888457,8.20841209933837,9.18316513451176,9.46978942340841,11.8058539048442,10.0273623376796,10.6965614585188,11.8040296615832,11.6765342367169,8.22799249567402,7.38753588355929,10.4578764314154,10.3801991071986,8.34290438105992,8.72341721942416,16.6129059365661,15.8473103064098,12.2254949704005,13.2225283331772,7.89166526980366,11.3795969211615,8.24751752461397,9.27744213267376,7.78323153457046,5.51654315726422,6.64340686162316,5.59976446061637,9.0480675168097,9.15199771389294,9.35827618171777,3.59527763461689,9.07779809473716,10.7536287557358,4.74169752382704,12.3388393618507,7.88954149711563,12.6263823264095,9.30971938404604,10.3099655238768,8.41045943752622,9.15182917473533,8.16393384775149,6.91024117962083,3.85388415213294,4.50481785433454,3.34150291692445,2.47348323623339,4.66578279193557,3.37648023653384,2.80088436959562,2.87696137450811,3.72911021582581,3.56929837144506,12.9391385874619,6.69853705803306,7.80094182786401,6.31447194867779,3.76734568396016,2.8946611281802,10.5309318394965,6.44270800019648,7.65935389277522,11.712410918488,14.7854856421756,11.3904255060435,8.56957107189649,11.3177515757523,13.24135210492,11.5161638617363,13.7131101045439,12.2897486036803,8.28887912956299,12.2951699794285,9.04747703635634,2.71952841909355,9.83528546038072,8.55403913544671,7.86697890940181,8.90808818100744,10.4918365041072,5.04941854408746,6.31016438832513,6.63745865304285,9.04778270477756,10.5146271099123,7.79795359288379,8.77537245445381,6.07216052512342,8.18316402151673,8.30104333687699,11.2462460747632,12.9165477539524,6.58842733568844,12.2165219515182,13.3625799607754,21.2392221343941,6.31229654002952,10.5813244937663,9.24164890803901,4.42952839321159,9.22305443831782,14.9888410037568,12.3601468022352,9.26893183800275,11.6933600436252,14.7586052004998,13.4076206222643,13.6175842301515,11.1637878299412,6.46793418913772,11.1455258216428,12.4138163549592,13.7343989553594,10.2020392773315,4.87143918583359,7.50949465803873,5.93129798418696,11.2469483008031,15.0046490176747,15.1776561094151,12.364149610272,13.4890748723544,16.2499490747611,10.7847909553045,10.198391610578,5.98048082792484,6.3979929068599,7.03739204004904,3.95573759709851,5.19438065339896,4.57556346413045,4.41943917984024,4.47844647435706,5.66619892598138,2.86401185404534,8.38290382990009,7.72613975082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| |||
|short_description=p1@Csnk1g1 | |||
}} |
Revision as of 12:25, 5 August 2015
Short description: | p1@Csnk1g1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Csnk1g1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000124688, ENSMUST00000130798_5end |
EntrezGene: | 214897 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 2.62e-08 | 39 |
forebrain | 2.62e-08 | 39 |
future forebrain | 2.62e-08 | 39 |
anterior neural tube | 4.22e-08 | 40 |
pre-chordal neural plate | 1.35e-07 | 49 |
brain grey matter | 2.08e-07 | 29 |
regional part of telencephalon | 2.08e-07 | 29 |
telencephalon | 2.08e-07 | 29 |
brain | 2.17e-07 | 47 |
future brain | 2.17e-07 | 47 |
regional part of brain | 3.33e-07 | 46 |
ecto-epithelium | 5.49e-07 | 73 |