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FFCP PHASE1:Mm9::chr13:101386644..101386666,-: Difference between revisions

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{{FFCP|EntrezGene=218518|HGNC=|MCL_coexpression_id=12|UniProt=A1BQX3|association_with_transcript=232bp_to_uc007rra.2_5end|description=CAGE_peak_2_at_Marveld2_5end|id=chr13:101386644..101386666,-|ontology_enrichment_celltype=CL:0000066!2.30e-07!25|ontology_enrichment_celltype_v019_2=CL:0000066,1.19e-09,25;CL:0002563,1.84e-07,9;CL:0002251,1.84e-07,9;CL:0000223,2.29e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!2.56e-17!130;UBERON:0000925!2.56e-17!130;UBERON:0006595!2.56e-17!130;UBERON:0001007!2.47e-16!128;UBERON:0001555!2.47e-16!128;UBERON:0007026!2.47e-16!128;UBERON:0000160!8.47e-16!43;UBERON:0004921!3.52e-15!126;UBERON:0004185!3.52e-15!126;UBERON:0005409!1.75e-14!59;UBERON:0000344!2.29e-10!15;UBERON:0002107!1.35e-09!22;UBERON:0007499!1.35e-09!22;UBERON:0006925!1.35e-09!22;UBERON:0009497!1.35e-09!22;UBERON:0000015!1.35e-09!22;UBERON:0002423!1.35e-09!22;UBERON:0006235!1.35e-09!22;UBERON:0008835!1.35e-09!22;UBERON:0003894!1.35e-09!22;UBERON:0004161!1.35e-09!22;UBERON:0008836!1.35e-09!22;UBERON:0002365!3.06e-09!25;UBERON:0002330!3.06e-09!25;UBERON:0001242!4.91e-09!13;UBERON:0000060!4.91e-09!13;UBERON:0001262!4.91e-09!13;UBERON:0004786!4.91e-09!13;UBERON:0009854!1.40e-08!23;UBERON:0009856!1.40e-08!23;UBERON:0005177!2.15e-08!85;UBERON:0000466!4.15e-08!79;UBERON:0009569!9.29e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.00e-18,118;UBERON:0000925,9.00e-18,118;UBERON:0006595,9.00e-18,118;UBERON:0001007,1.19e-16,116;UBERON:0001555,1.19e-16,116;UBERON:0007026,1.19e-16,116;UBERON:0004921,2.44e-15,114;UBERON:0000160,5.73e-15,31;UBERON:0005409,5.74e-14,47;UBERON:0000344,2.38e-12,15;UBERON:0002107,2.08e-11,22;UBERON:0007499,2.08e-11,22;UBERON:0006925,2.08e-11,22;UBERON:0009497,2.08e-11,22;UBERON:0000015,2.08e-11,22;UBERON:0002423,2.08e-11,22;UBERON:0006235,2.08e-11,22;UBERON:0008835,2.08e-11,22;UBERON:0003894,2.08e-11,22;UBERON:0004161,2.08e-11,22;UBERON:0008836,2.08e-11,22;UBERON:0001242,1.01e-10,13;UBERON:0001262,1.01e-10,13;UBERON:0004786,1.01e-10,13;UBERON:0002365,1.26e-10,25;UBERON:0002330,1.26e-10,25;UBERON:0009854,1.58e-10,23;UBERON:0009856,1.58e-10,23;UBERON:0005177,1.74e-10,79;UBERON:0004923,1.14e-08,24;UBERON:0002100,3.59e-08,90;UBERON:0000485,1.31e-07,11;UBERON:0003350,1.84e-07,9;UBERON:0004808,1.84e-07,9;UBERON:0001277,1.84e-07,9;UBERON:0009569,8.38e-07,66|phase1_expression=1.44133962394315,6.63053274514786,5.0049916332849,6.35174843744343,7.01254021924886,7.89032577985882,6.07392865548367,0,0,0,0,0,0,0,0,0,0,1.41957974411207,0.822686601634433,1.69755860719212,1.19060606211498,0,0,6.55968933452967,5.96464130774642,4.59385571292016,3.4460959692726,5.38678081714723,8.17100703662408,5.04060259519861,8.42575940490158,0,1.23012957516914,0,3.17736781726402,2.65975432573588,2.24586291888606,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0.672187598284928,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0.883474163806454,0,0.191690942036473,0.919218786610021,0,0.255374676170375,0.46081959976873,0.131886287730194,0.457438218012048,0,0.837548997004143,0,0,0,0.569486723196412,0.186399445825301,0,0.302286240427142,1.44932244350839,2.58127163094416,1.3599426674155,3.77792234146472,2.59910566979068,2.68816132258401,0.983110940922263,0,0,0,1.69012103732017,0,0,0,2.59789249213457,2.78695852022608,1.51657333504435,1.48439043634778,0.517875767294343,0,0.867426633830679,0.304465478312141,0,0.150722640552623,0.352766121407114,0.125666591329675,8.65182387070309,0,0.884610551949874,0.485300549842228,0,0,0,3.22058876712702,4.1889341362691,2.81002760729451,1.31796636956512,0,1.27070227073065,0.299581278809645,0,0.125654352112864,0,0,0,0.324482526135515,0.305518091550949,0.373220911830279,1.26361379216837,1.26265113531884,0.780722657776222,0.229902104433473,0.360124259610698,0.753524089178575,0.204109497453984,0.2562274405697,0.468508622798644,0.776110112217047,0.215567992932842,0.756424320671277,0.527853372491847,0.657587197282725,0,1.74126083261083,0.823128545631774,0.398068533636986,0,0,0.284163499395593,0.414251545071004,0.938104239924385,0.36012412292203,0.710234206755631,0,0.462801338662135,0.232533944750408,1.07309360559848,0.233530684734339,0.329119699826961,0.656669856316381,0.243206428637567,0,0.219550115291051,0,0,0.102904612379284,6.27795687669216,3.70230793328962,0.853153002140936,0.464473343720877,2.44848176511977,1.81515172161008,3.33567065767305,1.90225626112559,5.21981967698963,3.12928013975621,2.26201687920243,3.38226002469956,3.11942539390592,2.69645822596266,5.18731319699266,3.38540164532424,1.32767530667157,1.37098215131675,1.1270773567308,1.22190796707189,1.55161989734101,1.61312385747733,1.89709611372772,2.06654207171443,3.29697328466887,2.22114895059241,2.66807364378434,1.33476084572875,1.96558995113203,1.57403478669398,3.44862206360455,5.54707467430559,3.05551022137704,4.02774592431135,4.37765112292595,4.11842119782122,2.87536413054709,3.34926852901653,4.36852742360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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:218518
|HGNC=
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=uniprot:A1BQX3
|association_with_transcript=232bp_to_uc007rra.2_5end
|cluster_id=chr13:101386644..101386666,-
|description=CAGE_peak_2_at_Marveld2_5end
|id=chr13:101386644..101386666,-
|ontology_enrichment_celltype=CL:0000066!2.30e-07!25
|ontology_enrichment_celltype_v019_2=CL:0000066,1.19e-09,25;CL:0002563,1.84e-07,9;CL:0002251,1.84e-07,9;CL:0000223,2.29e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!2.56e-17!130;UBERON:0000925!2.56e-17!130;UBERON:0006595!2.56e-17!130;UBERON:0001007!2.47e-16!128;UBERON:0001555!2.47e-16!128;UBERON:0007026!2.47e-16!128;UBERON:0000160!8.47e-16!43;UBERON:0004921!3.52e-15!126;UBERON:0004185!3.52e-15!126;UBERON:0005409!1.75e-14!59;UBERON:0000344!2.29e-10!15;UBERON:0002107!1.35e-09!22;UBERON:0007499!1.35e-09!22;UBERON:0006925!1.35e-09!22;UBERON:0009497!1.35e-09!22;UBERON:0000015!1.35e-09!22;UBERON:0002423!1.35e-09!22;UBERON:0006235!1.35e-09!22;UBERON:0008835!1.35e-09!22;UBERON:0003894!1.35e-09!22;UBERON:0004161!1.35e-09!22;UBERON:0008836!1.35e-09!22;UBERON:0002365!3.06e-09!25;UBERON:0002330!3.06e-09!25;UBERON:0001242!4.91e-09!13;UBERON:0000060!4.91e-09!13;UBERON:0001262!4.91e-09!13;UBERON:0004786!4.91e-09!13;UBERON:0009854!1.40e-08!23;UBERON:0009856!1.40e-08!23;UBERON:0005177!2.15e-08!85;UBERON:0000466!4.15e-08!79;UBERON:0009569!9.29e-07!66
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.00e-18,118;UBERON:0000925,9.00e-18,118;UBERON:0006595,9.00e-18,118;UBERON:0001007,1.19e-16,116;UBERON:0001555,1.19e-16,116;UBERON:0007026,1.19e-16,116;UBERON:0004921,2.44e-15,114;UBERON:0000160,5.73e-15,31;UBERON:0005409,5.74e-14,47;UBERON:0000344,2.38e-12,15;UBERON:0002107,2.08e-11,22;UBERON:0007499,2.08e-11,22;UBERON:0006925,2.08e-11,22;UBERON:0009497,2.08e-11,22;UBERON:0000015,2.08e-11,22;UBERON:0002423,2.08e-11,22;UBERON:0006235,2.08e-11,22;UBERON:0008835,2.08e-11,22;UBERON:0003894,2.08e-11,22;UBERON:0004161,2.08e-11,22;UBERON:0008836,2.08e-11,22;UBERON:0001242,1.01e-10,13;UBERON:0001262,1.01e-10,13;UBERON:0004786,1.01e-10,13;UBERON:0002365,1.26e-10,25;UBERON:0002330,1.26e-10,25;UBERON:0009854,1.58e-10,23;UBERON:0009856,1.58e-10,23;UBERON:0005177,1.74e-10,79;UBERON:0004923,1.14e-08,24;UBERON:0002100,3.59e-08,90;UBERON:0000485,1.31e-07,11;UBERON:0003350,1.84e-07,9;UBERON:0004808,1.84e-07,9;UBERON:0001277,1.84e-07,9;UBERON:0009569,8.38e-07,66
|phase1_expression=1.44133962394315,6.63053274514786,5.0049916332849,6.35174843744343,7.01254021924886,7.89032577985882,6.07392865548367,0,0,0,0,0,0,0,0,0,0,1.41957974411207,0.822686601634433,1.69755860719212,1.19060606211498,0,0,6.55968933452967,5.96464130774642,4.59385571292016,3.4460959692726,5.38678081714723,8.17100703662408,5.04060259519861,8.42575940490158,0,1.23012957516914,0,3.17736781726402,2.65975432573588,2.24586291888606,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0.672187598284928,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.285650984403804,0.883474163806454,0,0.191690942036473,0.919218786610021,0,0.255374676170375,0.46081959976873,0.131886287730194,0.457438218012048,0,0.837548997004143,0,0,0,0.569486723196412,0.186399445825301,0,0.302286240427142,1.44932244350839,2.58127163094416,1.3599426674155,3.77792234146472,2.59910566979068,2.68816132258401,0.983110940922263,0,0,0,1.69012103732017,0,0,0,2.59789249213457,2.78695852022608,1.51657333504435,1.48439043634778,0.517875767294343,0,0.867426633830679,0.304465478312141,0,0.150722640552623,0.352766121407114,0.125666591329675,8.65182387070309,0,0.884610551949874,0.485300549842228,0,0,0,3.22058876712702,4.1889341362691,2.81002760729451,1.31796636956512,0,1.27070227073065,0.299581278809645,0,0.125654352112864,0,0,0,0.324482526135515,0.305518091550949,0.373220911830279,1.26361379216837,1.26265113531884,0.780722657776222,0.229902104433473,0.360124259610698,0.753524089178575,0.204109497453984,0.2562274405697,0.468508622798644,0.776110112217047,0.215567992932842,0.756424320671277,0.527853372491847,0.657587197282725,0,1.74126083261083,0.823128545631774,0.398068533636986,0,0,0.284163499395593,0.414251545071004,0.938104239924385,0.36012412292203,0.710234206755631,0,0.462801338662135,0.232533944750408,1.07309360559848,0.233530684734339,0.329119699826961,0.656669856316381,0.243206428637567,0,0.219550115291051,0,0,0.102904612379284,6.27795687669216,3.70230793328962,0.853153002140936,0.464473343720877,2.44848176511977,1.81515172161008,3.33567065767305,1.90225626112559,5.21981967698963,3.12928013975621,2.26201687920243,3.38226002469956,3.11942539390592,2.69645822596266,5.18731319699266,3.38540164532424,1.32767530667157,1.37098215131675,1.1270773567308,1.22190796707189,1.55161989734101,1.61312385747733,1.89709611372772,2.06654207171443,3.29697328466887,2.22114895059241,2.66807364378434,1.33476084572875,1.96558995113203,1.57403478669398,3.44862206360455,5.54707467430559,3.05551022137704,4.02774592431135,4.37765112292595,4.11842119782122,2.87536413054709,3.34926852901653,4.36852742360385,2.27320990152401,2.87035861635059,5.30687873499704,2.03228509183265,0.568474235311454,0.488894929326078,0.678980343100753,0.938760993154008,1.34005005953453,1.19021820443007,1.56106918286239,1.57635144106191,1.10732344824387,0.956728611944923,1.3109065177259,1.03610989119537,1.44649058581512,0,0,0.491764273019036,1.37968373152366,0.481651769963376,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,1.06839362200353,0.81443479676788,0.989820737835213,0,3.15614827001476,3.02323556964751,2.45186603682668,2.36241514304618,3.99665692327106,2.84271122485043,3.63533729477506,3.20847640546249,1.26414703174326,1.05418608574999,3.09406629744561,4.08527526904546,0.900305470156551,1.29358683782755,2.14337035031592,2.48276327099183,1.07021290561242,0.822745103010605,1.8267896946876,3.28540391289194,3.60114520468494,1.32317038832977,3.79238381765404,0.807322133479528,0.844380948994182,1.90995750405018,1.80554989719567,2.33184669303881,0.18542530201051,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,4.24946074984638,2.23922323717853,2.3493995546752,1.90934123603023,1.26534397432454,1.42323626988794,1.62008011232702,1.46361807210128,1.9652630737156,2.83215127408124,2.64491058321075,3.40282724579238,4.01806417204558,1.24267862617385,0,0.598066184175915,0.66183396182839,0.388902376688095,0.645799117388655,0.506868376472335,0.821500670520278,0.5208175393758,1.04859344425711,0.241584120826006,0,0,0.405450430580328,0.308132871494482,0.129920822977795,0,0.596044064343795,0.120195449519969,0,0.100966449948148,0,0.403304740547362,0.0974578807397524,0.288635524920988,0,1.58711268530648,0.665957860122194,1.70456327558004,3.18980771091749,2.51146472241848,0.375364950902364,0.915758121336325,3.21552568618599,4.51414893631827,0,0.920650473014354,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0.906284817968409,0,0.207574695168353,0,0.853668028770671,1.70174701947806,1.25767897576789,0.919217542250071,0.44449345560323,0.824140228955577,0,0.505394423527595,2.28131369901216,0.943131706930381,1.12369808963859,0.768301828858431,1.26358031702349,0,1.39061191133827,1.35036454324594,1.23625770240992,1.17759136107518,1.02860775715625,1.24233064311536,0.715308569841963,0.581385666529314,1.12931256498397,0.676916863133412,0.73171189149109,1.8414879800649,1.22223702461276,1.12228454331548,0.949080144993393,1.18205378850676,0.409231043169689,0,1.54325288784913,0.249810577937946,1.16965804222704,1.50409737833809,1.53030665655075,0.441182838239031,0.695603506861264
|short_description=p2@Marveld2
}}

Revision as of 12:48, 5 August 2015

Short description:p2@Marveld2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Marveld2_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 232bp_to_uc007rra.2_5end
EntrezGene:218518
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Marveld2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.35
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I77.89
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I25.39
Ileum epithelium, pool1.CNhs13199.10252-104B98.17
Ileum epithelium, pool2.CNhs13232.10253-104C15.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C88.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.23
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F62.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.46
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.78
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A88.65
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I24.19
colon, adult.CNhs10468.36-18H72.81
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.27
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.20
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I36.28
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D82.45
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D33.34
intestine, embryo E18.CNhs10526.1289-20F71.90
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E93.13
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F23.38
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I91.33
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G71.61
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F33.30
kidney, neonate N30.CNhs11203.1385-42H12.22
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F81.33
liver, embryo E13.CNhs10524.378-3H61.97
liver, embryo E14.CNhs10594.409-16E11.57
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F55.55
liver, embryo E17.CNhs10510.481-18A33.06
liver, embryo E18.CNhs10579.499-43G44.03
liver, neonate N00.CNhs11117.641-24F44.38
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H23.35
liver, neonate N10.CNhs11115.751-24B94.37
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H12.87
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B12.03
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F23.02
pancreas, embryo E16.CNhs11003.460-26E52.45
pancreas, embryo E17.CNhs10599.1558-45G32.36
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D73.64
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A52.14
pituitary gland, embryo E15.CNhs10592.427-16B92.48
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F81.32
skin, adult.CNhs10492.30-1C33.79
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C41.81
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D32.35
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A92.64
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I14.02
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B70.82
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D91.05
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.70
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G53.19
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F84.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell1.19e-0925
intestinal epithelial cell1.84e-079
epithelial cell of alimentary canal1.84e-079
endodermal cell2.29e-0720

Uber anatomy
Ontology termp-valuen
endoderm-derived structure9.00e-18118
endoderm9.00e-18118
presumptive endoderm9.00e-18118
digestive system1.19e-16116
digestive tract1.19e-16116
primitive gut1.19e-16116
subdivision of digestive tract2.44e-15114
intestine5.73e-1531
gastrointestinal system5.74e-1447
mucosa2.38e-1215
liver2.08e-1122
epithelial sac2.08e-1122
digestive gland2.08e-1122
epithelium of foregut-midgut junction2.08e-1122
anatomical boundary2.08e-1122
hepatobiliary system2.08e-1122
foregut-midgut junction2.08e-1122
hepatic diverticulum2.08e-1122
liver primordium2.08e-1122
septum transversum2.08e-1122
liver bud2.08e-1122
intestinal mucosa1.01e-1013
wall of intestine1.01e-1013
gastrointestinal system mucosa1.01e-1013
exocrine gland1.26e-1025
exocrine system1.26e-1025
digestive tract diverticulum1.58e-1023
sac1.58e-1023
trunk region element1.74e-1079
organ component layer1.14e-0824
trunk3.59e-0890
simple columnar epithelium1.31e-0711
epithelium of mucosa1.84e-079
gastrointestinal system epithelium1.84e-079
intestinal epithelium1.84e-079
subdivision of trunk8.38e-0766
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