FFCP PHASE1:Mm9::chr6:29997979..29998049,+: Difference between revisions
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{{FFCP|EntrezGene=18181|HGNC=|MCL_coexpression_id=49|UniProt=Q99K73,D3Z3B4,Q9WU00,D3YV66,D3YVX7,Q8C4C0,Q8CAV3,G3XA39,E9Q7X0,Q3UYQ3|association_with_transcript=0bp_to_ENSMUST00000115206,ENSMUST00000115208,ENSMUST00000115211,ENSMUST00000115212,ENSMUST00000123194,ENSMUST00000133928,ENSMUST00000146988,NM_001164226,NM_001164227,NM_001164228,NM_001164230,NM_010938,uc009ber.1,uc009bes.1,uc009bet.1,uc009beu.1,uc009bev.1,uc009bew.1_5end|description=CAGE_peak_1_at_Nrf1_5end|id=chr6:29997979..29998049,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.76e-11!29;UBERON:0002390!6.48e-10!45;UBERON:0003061!6.48e-10!45;UBERON:0005057!8.02e-10!51;UBERON:0002405!4.12e-09!70;UBERON:0002193!4.75e-09!48;UBERON:0000065!7.08e-09!41;UBERON:0001004!1.98e-08!42;UBERON:0002370!4.60e-08!23;UBERON:0000974!4.60e-08!23;UBERON:0004807!4.60e-08!23;UBERON:0005058!4.60e-08!23;UBERON:0003351!4.60e-08!23;UBERON:0009113!4.60e-08!23;UBERON:0003295!4.60e-08!23;UBERON:0009722!4.60e-08!23;UBERON:0005562!4.60e-08!23;UBERON:0007690!4.60e-08!23;UBERON:0005911!5.70e-08!69;UBERON:0006562!9.53e-08!24;UBERON:0001557!9.53e-08!24;UBERON:0001042!9.53e-08!24;UBERON:0008814!9.53e-08!24;UBERON:0009145!9.53e-08!24;UBERON:0003408!1.86e-07!24;UBERON:0001048!1.93e-07!147;UBERON:0001041!2.99e-07!92;UBERON:0000072!7.28e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.76e-11,29;UBERON:0005057,3.76e-11,29;UBERON:0001041,5.67e-10,80;UBERON:0002390,6.48e-10,45;UBERON:0003061,6.48e-10,45;UBERON:0001048,4.52e-09,134;UBERON:0002193,4.75e-09,48;UBERON:0002405,4.75e-09,48;UBERON:0000077,5.36e-09,35;UBERON:0000065,7.08e-09,41;UBERON:0001004,1.98e-08,42;UBERON:0002370,4.60e-08,23;UBERON:0000974,4.60e-08,23;UBERON:0004807,4.60e-08,23;UBERON:0005058,4.60e-08,23;UBERON:0003351,4.60e-08,23;UBERON:0009113,4.60e-08,23;UBERON:0003295,4.60e-08,23;UBERON:0009722,4.60e-08,23;UBERON:0005562,4.60e-08,23;UBERON:0007690,4.60e-08,23;UBERON:0000153,5.04e-08,43;UBERON:0005911,5.70e-08,69;UBERON:0004921,7.22e-08,114;UBERON:0006562,9.53e-08,24;UBERON:0001557,9.53e-08,24;UBERON:0001042,9.53e-08,24;UBERON:0008814,9.53e-08,24;UBERON:0009145,9.53e-08,24;UBERON:0003408,1.86e-07,24;UBERON:0004119,3.24e-07,118;UBERON:0000925,3.24e-07,118;UBERON:0006595,3.24e-07,118;UBERON:0001007,3.45e-07,116;UBERON:0001555,3.45e-07,116;UBERON:0007026,3.45e-07,116;UBERON:0007811,4.76e-07,36;UBERON:0000072,7.28e-07,27|phase1_expression=12.4916100741739,13.9590163055744,13.6499771816861,17.5429242557961,14.5259761684441,15.1091344720701,16.8201101228778,37.4457637980571,36.4642790372817,42.1316147379588,29.2782725665614,33.7436232550273,26.3649124094057,32.957491711962,44.3035983214831,48.7965394409481,63.6601309096613,29.8111746263535,33.593036233406,33.9511721438424,13.9470995847754,16.7801707529496,20.112383763698,9.91953021319121,11.0116454912242,8.03924749761028,8.18447792702242,11.2045040996662,14.251756459228,13.1055667475164,11.7517170647311,34.2916563668201,30.1381745916439,0,21.086168241843,15.6260566636983,16.3335485009895,45.6199477503229,24.2213956802378,33.5055196143231,42.352667138233,47.8131839470912,32.0436833000561,12.5896817975577,10.9487085717076,8.81024410376071,8.60630478782843,13.0815093828268,6.37089929929968,11.0825042472342,11.198913730029,12.9377307928474,34.0598690297205,36.9934692425786,38.6507869013834,9.51859913333004,13.7536051170603,14.4388185837684,12.9482534950143,15.340738398889,22.1840991227163,12.876092218627,19.5644855144451,10.3488467487361,15.8218618010716,20.6039233334369,16.4780060785123,12.6792040756113,23.433852381716,23.6260392080459,21.8737959805437,7.7125765789027,8.61387309711293,21.5583806618319,25.1115134067779,18.3843757322004,4.40463523997555,6.63974158042976,8.1411462625809,16.353899678544,14.729510619988,15.106487746146,6.97957497503452,5.6276261003168,8.09830713217094,8.83885756421003,13.0981946335175,11.7431650869939,16.2054053733014,10.8823046553771,18.2614627882057,14.6272059086836,23.7989966797713,8.63525106620507,12.3457519315057,14.7848872742121,12.4995533917259,12.2709832256202,14.2882302531578,10.9535268098205,9.15482228548423,10.2661181931454,12.7402619853323,0,13.2059535016841,14.6948721975557,18.1988800205322,11.6467557313441,32.3672354558965,12.0238132642508,14.5727674483554,12.7875500891099,11.5307748628029,10.0984169170257,13.5227013206061,10.3046604890334,14.0901131608593,13.3031408366319,36.2690326299448,16.8237523945306,26.0592991783264,26.183263669302,16.775258509631,12.5895742714965,14.4518227701284,18.6483650302272,20.3685711660064,14.3976655438418,18.5522531526674,7.9389038884556,10.0650132620098,9.5497307605777,9.03886464999838,8.43861009190091,7.2725815595846,6.48965052271031,15.4795833052481,22.2688477392066,9.85618757891331,12.6265113531884,24.9831250488391,20.921091503446,22.147641966058,20.7972648613287,24.0168842004187,26.0070852178245,23.9876414872906,15.5222022443409,27.5927030954038,27.231275544166,23.4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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18181 | |||
|HGNC= | |||
|MCL_coexpression_id=49 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99K73,uniprot:D3Z3B4,uniprot:Q9WU00,uniprot:D3YV66,uniprot:D3YVX7,uniprot:Q8C4C0,uniprot:Q8CAV3,uniprot:G3XA39,uniprot:E9Q7X0,uniprot:Q3UYQ3 | |||
|association_with_transcript=0bp_to_ENSMUST00000115206,ENSMUST00000115208,ENSMUST00000115211,ENSMUST00000115212,ENSMUST00000123194,ENSMUST00000133928,ENSMUST00000146988,NM_001164226,NM_001164227,NM_001164228,NM_001164230,NM_010938,uc009ber.1,uc009bes.1,uc009bet.1,uc009beu.1,uc009bev.1,uc009bew.1_5end | |||
|cluster_id=chr6:29997979..29998049,+ | |||
|description=CAGE_peak_1_at_Nrf1_5end | |||
|id=chr6:29997979..29998049,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.76e-11!29;UBERON:0002390!6.48e-10!45;UBERON:0003061!6.48e-10!45;UBERON:0005057!8.02e-10!51;UBERON:0002405!4.12e-09!70;UBERON:0002193!4.75e-09!48;UBERON:0000065!7.08e-09!41;UBERON:0001004!1.98e-08!42;UBERON:0002370!4.60e-08!23;UBERON:0000974!4.60e-08!23;UBERON:0004807!4.60e-08!23;UBERON:0005058!4.60e-08!23;UBERON:0003351!4.60e-08!23;UBERON:0009113!4.60e-08!23;UBERON:0003295!4.60e-08!23;UBERON:0009722!4.60e-08!23;UBERON:0005562!4.60e-08!23;UBERON:0007690!4.60e-08!23;UBERON:0005911!5.70e-08!69;UBERON:0006562!9.53e-08!24;UBERON:0001557!9.53e-08!24;UBERON:0001042!9.53e-08!24;UBERON:0008814!9.53e-08!24;UBERON:0009145!9.53e-08!24;UBERON:0003408!1.86e-07!24;UBERON:0001048!1.93e-07!147;UBERON:0001041!2.99e-07!92;UBERON:0000072!7.28e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.76e-11,29;UBERON:0005057,3.76e-11,29;UBERON:0001041,5.67e-10,80;UBERON:0002390,6.48e-10,45;UBERON:0003061,6.48e-10,45;UBERON:0001048,4.52e-09,134;UBERON:0002193,4.75e-09,48;UBERON:0002405,4.75e-09,48;UBERON:0000077,5.36e-09,35;UBERON:0000065,7.08e-09,41;UBERON:0001004,1.98e-08,42;UBERON:0002370,4.60e-08,23;UBERON:0000974,4.60e-08,23;UBERON:0004807,4.60e-08,23;UBERON:0005058,4.60e-08,23;UBERON:0003351,4.60e-08,23;UBERON:0009113,4.60e-08,23;UBERON:0003295,4.60e-08,23;UBERON:0009722,4.60e-08,23;UBERON:0005562,4.60e-08,23;UBERON:0007690,4.60e-08,23;UBERON:0000153,5.04e-08,43;UBERON:0005911,5.70e-08,69;UBERON:0004921,7.22e-08,114;UBERON:0006562,9.53e-08,24;UBERON:0001557,9.53e-08,24;UBERON:0001042,9.53e-08,24;UBERON:0008814,9.53e-08,24;UBERON:0009145,9.53e-08,24;UBERON:0003408,1.86e-07,24;UBERON:0004119,3.24e-07,118;UBERON:0000925,3.24e-07,118;UBERON:0006595,3.24e-07,118;UBERON:0001007,3.45e-07,116;UBERON:0001555,3.45e-07,116;UBERON:0007026,3.45e-07,116;UBERON:0007811,4.76e-07,36;UBERON:0000072,7.28e-07,27 | |||
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| |||
|short_description=p1@Nrf1 | |||
}} |
Revision as of 13:12, 5 August 2015
Short description: | p1@Nrf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nrf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:49 |
Association with transcript: | 0bp_to_ENSMUST00000115206, ENSMUST00000115208, ENSMUST00000115211, ENSMUST00000115212, ENSMUST00000123194, ENSMUST00000133928, ENSMUST00000146988, NM_001164226, NM_001164227, NM_001164228, NM_001164230, NM_010938, uc009ber.1, uc009bes.1, uc009bet.1, uc009beu.1, uc009bev.1, uc009bew.1_5end |
EntrezGene: | 18181 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data