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FFCP PHASE1:Mm9::chr1:23929122..23929205,-: Difference between revisions

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{{FFCP|EntrezGene=98366|HGNC=|UniProt=Q91VZ6|association_with_transcript=0bp_to_ENSMUST00000027339,NM_028534,uc007amh.1_5end|description=CAGE_peak_1_at_Smap1_5end|id=chr1:23929122..23929205,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!1.69e-10!102;UBERON:0000924!1.69e-10!102;UBERON:0006601!1.69e-10!102;UBERON:0002020!6.04e-10!34;UBERON:0000955!1.39e-09!50;UBERON:0006238!1.39e-09!50;UBERON:0001017!1.48e-09!73;UBERON:0005743!1.48e-09!73;UBERON:0001049!1.65e-09!52;UBERON:0005068!1.65e-09!52;UBERON:0006241!1.65e-09!52;UBERON:0007135!1.65e-09!52;UBERON:0000033!3.08e-09!63;UBERON:0002616!4.86e-09!49;UBERON:0000073!7.23e-09!75;UBERON:0001016!7.23e-09!75;UBERON:0002791!1.26e-08!29;UBERON:0003528!1.26e-08!29;UBERON:0001893!1.26e-08!29;UBERON:0002346!5.42e-08!71;UBERON:0003075!5.42e-08!71;UBERON:0007284!5.42e-08!71;UBERON:0003080!6.46e-08!40;UBERON:0003056!7.58e-08!49;UBERON:0002780!1.22e-07!39;UBERON:0001890!1.22e-07!39;UBERON:0006240!1.22e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.22e-11,95;UBERON:0000924,2.22e-11,95;UBERON:0006601,2.22e-11,95;UBERON:0010371,4.63e-11,73;UBERON:0000073,2.23e-10,54;UBERON:0002020,6.04e-10,34;UBERON:0001017,1.48e-09,73;UBERON:0001049,1.65e-09,52;UBERON:0005068,1.65e-09,52;UBERON:0006241,1.65e-09,52;UBERON:0007135,1.65e-09,52;UBERON:0002346,5.34e-09,64;UBERON:0003075,5.34e-09,64;UBERON:0007284,5.34e-09,64;UBERON:0001016,7.23e-09,75;UBERON:0003528,1.26e-08,29;UBERON:0002791,1.26e-08,29;UBERON:0001893,1.26e-08,29;UBERON:0000955,1.91e-08,47;UBERON:0006238,1.91e-08,47;UBERON:0002616,6.34e-08,46;UBERON:0003080,6.46e-08,40;UBERON:0003056,7.58e-08,49;UBERON:0002780,1.22e-07,39;UBERON:0001890,1.22e-07,39;UBERON:0006240,1.22e-07,39|phase1_expression=26.424559772291,40.4811472861659,46.4099224177327,22.6848158480123,37.0662840160297,19.809754085603,14.2503710763271,26.4702813055231,8.16574588479667,8.42632294759177,5.82141091966717,9.25357044345902,13.8672591244277,14.7740480088106,40.9725007033265,51.4287179170158,57.364074006508,10.4102514568218,11.1062691220648,13.580468857537,21.5159524082207,8.83689465687879,5.48519557191764,22.5589316138703,18.8115610475079,26.988902313406,30.5841017272943,26.9339040857361,22.6127869153085,30.2436155711917,24.3903561720835,11.4305521222734,9.84103660135312,15.8481681015439,7.79899373328441,11.3039558843775,10.2084678131185,25.5304294749514,21.0960543021426,21.4644735029257,22.3527965451785,28.6879103682547,26.7030694167134,25.8088476849933,26.8648867731714,25.5129985504737,15.6478268869608,15.6978112593922,23.5064215525885,23.7204476870626,18.0582483896718,20.125359011096,10.7380867876951,15.9579671242496,13.4437519656986,18.7799388306241,19.7708073557742,18.5641953219879,29.9428362072205,25.9205579843296,27.8885817542719,18.6364492638023,23.1216646988896,16.6481447697059,13.8441290759376,6.3943210345149,20.6724076257699,18.8266969607562,31.0031940802348,27.1361936046698,25.4493203235172,28.5650984403804,26.0624878322904,19.7210186736076,21.086003624012,19.3035945188104,30.8324466798288,39.2000127921526,35.6367157154485,36.7962742767241,39.2481991054337,35.9430225684164,33.2227768811643,21.9477417912355,33.004421519791,29.7574871328404,33.8844600301865,33.3655008027288,17.4927506599655,18.5906037862692,15.3628179011889,16.3480536626463,21.0791113449403,14.0322829825832,16.8941868536394,17.4730485967961,19.5217743983135,28.1210032253795,17.6654483129951,15.1936017039446,20.281452447842,24.3820307087204,25.4805239706646,7.11066703153331,7.14420435337007,8.61423542615335,5.05524445014783,24.0927986207217,24.8580368301285,18.1099409659086,15.6136794089522,19.1813251336649,20.7553947530453,20.6490017557093,28.4564671268406,29.2803157798144,42.5175344503123,26.6062816732637,35.384422077995,33.9710384889559,46.597560395143,38.3051449976825,13.0474232852686,29.5708604981663,35.3964934514739,29.1221042937794,8.38705871541442,8.39863823390771,8.89491589511453,30.407499799179,25.1625331550245,40.5863557324552,40.5010666048004,55.7459696980121,35.7395436642443,39.4246269254651,31.875720885149,33.0922541822847,12.8888606801174,27.1469994093551,19.778307330331,19.7715809812787,22.5077662256687,22.3043130396858,29.051585137617,23.9572656932669,25.2994656311268,35.9597685327232,17.4610074275602,18.1541836961106,18.2989169130507,23.0155519048954,23.0779216857246,31.6909471535172,29.01528123352,17.1169469463904,4.91549231119264,3.86021860672073,10.2298859782413,15.5344329401626,12.195355119017,12.9644684251931,17.7558551688908,14.7573173810553,13.884040159864,15.8123082430277,17.9743178937745,16.5806786161381,18.4307031903098,16.7450813360677,21.2400281010142,15.3509986796599,18.6617597997393,20.1309628140558,43.3197294042102,31.7975252251989,35.6852285622502,34.3785736662608,22.6085545567348,19.5078804362768,18.8146493530256,19.3616183638409,20.2364019898832,26.4413620296457,28.4717436926707,31.2928013975621,23.6255096272253,31.2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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:98366
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q91VZ6
|association_with_transcript=0bp_to_ENSMUST00000027339,NM_028534,uc007amh.1_5end
|cluster_id=chr1:23929122..23929205,-
|description=CAGE_peak_1_at_Smap1_5end
|id=chr1:23929122..23929205,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.22e-11,95;UBERON:0000924,2.22e-11,95;UBERON:0006601,2.22e-11,95;UBERON:0010371,4.63e-11,73;UBERON:0000073,2.23e-10,54;UBERON:0002020,6.04e-10,34;UBERON:0001017,1.48e-09,73;UBERON:0001049,1.65e-09,52;UBERON:0005068,1.65e-09,52;UBERON:0006241,1.65e-09,52;UBERON:0007135,1.65e-09,52;UBERON:0002346,5.34e-09,64;UBERON:0003075,5.34e-09,64;UBERON:0007284,5.34e-09,64;UBERON:0001016,7.23e-09,75;UBERON:0003528,1.26e-08,29;UBERON:0002791,1.26e-08,29;UBERON:0001893,1.26e-08,29;UBERON:0000955,1.91e-08,47;UBERON:0006238,1.91e-08,47;UBERON:0002616,6.34e-08,46;UBERON:0003080,6.46e-08,40;UBERON:0003056,7.58e-08,49;UBERON:0002780,1.22e-07,39;UBERON:0001890,1.22e-07,39;UBERON:0006240,1.22e-07,39
|phase1_expression=26.424559772291,40.4811472861659,46.4099224177327,22.6848158480123,37.0662840160297,19.809754085603,14.2503710763271,26.4702813055231,8.16574588479667,8.42632294759177,5.82141091966717,9.25357044345902,13.8672591244277,14.7740480088106,40.9725007033265,51.4287179170158,57.364074006508,10.4102514568218,11.1062691220648,13.580468857537,21.5159524082207,8.83689465687879,5.48519557191764,22.5589316138703,18.8115610475079,26.988902313406,30.5841017272943,26.9339040857361,22.6127869153085,30.2436155711917,24.3903561720835,11.4305521222734,9.84103660135312,15.8481681015439,7.79899373328441,11.3039558843775,10.2084678131185,25.5304294749514,21.0960543021426,21.4644735029257,22.3527965451785,28.6879103682547,26.7030694167134,25.8088476849933,26.8648867731714,25.5129985504737,15.6478268869608,15.6978112593922,23.5064215525885,23.7204476870626,18.0582483896718,20.125359011096,10.7380867876951,15.9579671242496,13.4437519656986,18.7799388306241,19.7708073557742,18.5641953219879,29.9428362072205,25.9205579843296,27.8885817542719,18.6364492638023,23.1216646988896,16.6481447697059,13.8441290759376,6.3943210345149,20.6724076257699,18.8266969607562,31.0031940802348,27.1361936046698,25.4493203235172,28.5650984403804,26.0624878322904,19.7210186736076,21.086003624012,19.3035945188104,30.8324466798288,39.2000127921526,35.6367157154485,36.7962742767241,39.2481991054337,35.9430225684164,33.2227768811643,21.9477417912355,33.004421519791,29.7574871328404,33.8844600301865,33.3655008027288,17.4927506599655,18.5906037862692,15.3628179011889,16.3480536626463,21.0791113449403,14.0322829825832,16.8941868536394,17.4730485967961,19.5217743983135,28.1210032253795,17.6654483129951,15.1936017039446,20.281452447842,24.3820307087204,25.4805239706646,7.11066703153331,7.14420435337007,8.61423542615335,5.05524445014783,24.0927986207217,24.8580368301285,18.1099409659086,15.6136794089522,19.1813251336649,20.7553947530453,20.6490017557093,28.4564671268406,29.2803157798144,42.5175344503123,26.6062816732637,35.384422077995,33.9710384889559,46.597560395143,38.3051449976825,13.0474232852686,29.5708604981663,35.3964934514739,29.1221042937794,8.38705871541442,8.39863823390771,8.89491589511453,30.407499799179,25.1625331550245,40.5863557324552,40.5010666048004,55.7459696980121,35.7395436642443,39.4246269254651,31.875720885149,33.0922541822847,12.8888606801174,27.1469994093551,19.778307330331,19.7715809812787,22.5077662256687,22.3043130396858,29.051585137617,23.9572656932669,25.2994656311268,35.9597685327232,17.4610074275602,18.1541836961106,18.2989169130507,23.0155519048954,23.0779216857246,31.6909471535172,29.01528123352,17.1169469463904,4.91549231119264,3.86021860672073,10.2298859782413,15.5344329401626,12.195355119017,12.9644684251931,17.7558551688908,14.7573173810553,13.884040159864,15.8123082430277,17.9743178937745,16.5806786161381,18.4307031903098,16.7450813360677,21.2400281010142,15.3509986796599,18.6617597997393,20.1309628140558,43.3197294042102,31.7975252251989,35.6852285622502,34.3785736662608,22.6085545567348,19.5078804362768,18.8146493530256,19.3616183638409,20.2364019898832,26.4413620296457,28.4717436926707,31.2928013975621,23.6255096272253,31.2361661104607,27.2949721966768,26.0657628509724,32.8529835809535,30.2694735346638,13.2767530667157,16.1090402779718,18.0332377076929,21.383389423758,16.8738663835834,21.5316967063278,25.6740340724485,25.0937251565324,27.7887748279233,25.2964186039691,17.4907049981418,23.8588501174014,24.7664333842636,25.6342808118733,32.8633396649375,29.6647906495473,23.680204215672,21.28951417136,27.8872590053061,25.2596500133035,30.1913233707445,26.0498663367952,22.1546747911338,19.1959947239805,19.9131129009323,14.9557491622644,21.6161232494927,19.138632588819,20.2076570788112,15.2770577197669,21.5915028425422,19.7657383781343,23.5663204477154,38.2461949801286,32.7881099740877,31.447985930126,39.0664183210843,29.4953966488328,33.8462564457155,32.1120910050956,7.53956419696361,14.1415477792864,25.0799779239708,23.730560182207,26.3302967579979,38.2110098290582,20.0000633359544,16.4106102682842,22.7165917979705,18.350620981942,22.8348801596767,22.4630670075399,23.6166594527338,26.3261173633614,21.8597778904443,18.704374906324,23.7172666767914,62.3363353858306,21.7168330368651,25.4633813244175,28.0165570088151,25.2404288147979,17.2568679841952,12.3818124439041,16.9301191900261,24.3300552885109,16.5369060013233,25.2096821314021,30.4945385938501,25.0838273339479,26.0243086220847,25.2829406348653,23.1920938864997,21.6584640821192,21.7881347682424,19.9867814374754,19.4038025674132,25.9347812388227,22.699549906211,22.4744710178609,22.3786668018885,19.4857567433344,31.4460088805372,41.3072538184449,18.5243854366168,35.9452031412427,43.4339307811986,44.6918773717635,33.5436286648813,38.0806887408542,32.9373345391731,30.4097495297236,51.090393358558,20.2259130603958,25.0012611949111,63.1034330965715,63.4261216625557,64.5154448442394,13.5982743995084,11.056164733569,11.6087977995716,13.3653886522116,16.6076396630096,16.2655573701479,23.3291536175091,22.3724476735482,21.8362563746178,26.9728692769641,30.995045897001,26.175594198403,39.6621818272886,18.6401793926078,14.0923234671048,25.1187797353884,17.7040584789094,19.2506676460607,20.5364119329592,22.1332524392919,25.2318063088371,27.7335339717614,24.1176492179135,12.0792060413003,9.50499020650956,16.7485893932934,19.6643458831459,20.234058561471,13.7716072356463,13.7850555663961,14.7024202538136,16.8273629327956,15.6550898805052,16.4575313415481,16.384463430825,15.4264063259366,16.9576712487169,17.221919653619,15.3108741857855,26.9809156502102,16.6489465030549,20.6341870201794,20.3140385800535,19.8985281853156,30.0291960721891,29.3042598827624,42.230570678576,19.5613120573792,53.0866732060043,46.953174123732,46.4045365885911,51.5559547031063,34.2541259885321,42.3020582538232,41.1763725141402,44.5817991191978,33.9856806738153,29.5123377698537,19.2006593030727,20.3502685434526,19.8050982674796,23.3382448385562,25.9920321658698,25.0027171492019,19.5577120465421,21.427645952845,21.8225062522434,27.2912988704901,17.2365923925363,20.5602712110823,27.2496786737358,26.6344634004256,27.6838960366056,22.3858034903045,28.5075441824345,27.0072908649187,20.6042950401653,16.7806768953213,16.8005933668854,20.2322419021645,22.1745656651008,14.6799880798652,19.4806417459734,21.5767250123775,17.5610853957862,19.9932980692761,21.4570499876462,16.2731258780744,26.0997039873183,28.0737774770356,16.3692417267876,24.9448314309405,28.3572718142278,30.9765116643053,27.8378614050036,27.9332370262788,25.2500598330873,24.0444646840272,23.4186513976626
|short_description=p1@Smap1
}}

Revision as of 13:28, 5 August 2015

Short description:p1@Smap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Smap1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000027339, NM_028534, uc007amh.1_5end
EntrezGene:98366
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Smap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I540.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I646.41
CD326+ enterocyte, pool1.CNhs13542.11848-124I322.68
CD326+ enterocyte, pool2.CNhs13197.11849-124I437.07
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I719.81
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.25
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E926.47
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E78.17
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F28.43
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E65.82
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.25
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.87
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.77
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A140.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A351.43
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A557.36
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.41
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A411.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A613.58
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H28.84
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.49
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D122.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D218.81
GP2+ M cell, pool1.CNhs13228.11845-124H926.99
GP2+ M cell, pool2.CNhs13231.11846-124I130.58
GP2+ M cell, pool3.CNhs13240.11847-124I226.93
Ileum epithelium, pool1.CNhs13199.10252-104B922.61
Ileum epithelium, pool2.CNhs13232.10253-104C130.24
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C824.39
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I311.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.30
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F710.21
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G825.53
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.10
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H321.46
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G922.35
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H228.69
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H426.70
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D825.81
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D926.86
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B325.51
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B715.65
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.70
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B823.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C323.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C418.06
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.74
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.96
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.44
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C118.78
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E119.77
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C518.56
Mouse Granule cells, donor1.CNhs12131.11713-123C329.94
Mouse Granule cells, donor2.CNhs12357.11731-123E325.92
Mouse Granule cells, donor3.CNhs12108.11636-122C727.89
Mouse Meningeal cells, donor1.CNhs12132.11716-123C618.64
Mouse Meningeal cells, donor3.CNhs12109.11639-122D123.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C716.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E713.84
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D26.39
Mouse Microglia, donor1.CNhs12629.11718-123C820.67
Mouse Microglia, donor2.CNhs12634.11736-123E818.83
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D531.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F527.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D925.45
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F128.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D526.06
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D219.72
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.09
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D619.30
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D330.83
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F339.20
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.64
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D436.80
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F439.25
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D835.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E433.22
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E521.95
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I633.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D629.76
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F633.88
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E133.37
Mouse Schwann, donor1.CNhs12507.11728-123D917.49
Mouse Schwann, donor2.CNhs12573.11746-123F918.59
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.36
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F716.35
Mouse hepatocyte, donor1.CNhs13078.11714-123C421.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C814.03
Mouse hepatocyte, donor6.CNhs13090.11822-124F416.89
Mouse hepatocyte, donor8.CNhs13091.11824-124F617.47
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I728.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E317.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I815.19
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H124.38
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I825.48
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.14
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G28.61
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G35.06
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B624.09
accessory axillary lymph node, adult.CNhs10475.1063-29H924.86
adrenal gland, adult.CNhs10508.49-24D718.11
adrenal gland, embryo E14.CNhs11038.406-44C515.61
adrenal gland, embryo E16.CNhs11004.1254-43D619.18
adrenal gland, embryo E17.CNhs11043.1263-45I120.76
adrenal gland, embryo E18.CNhs11026.1262-18F520.65
adrenal gland, neonate N00.CNhs11191.1311-23C128.46
adrenal gland, neonate N25.CNhs11223.1377-27I329.28
amnion, adult pregnant day17.5.CNhs10488.583-22A842.52
aorta, adult.CNhs10498.46-23H126.61
bone (os femoris), adult.CNhs10483.56-12G235.38
bone (os femoris), neonate N02.CNhs11227.1985-43F533.97
bone (os femoris), neonate N16.CNhs11225.1525-43A646.60
bone (os femoris), neonate N20.CNhs11195.1350-25C338.31
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B229.57
cerebellum, neonate N30.CNhs11135.1395-42I235.40
colon, adult.CNhs10468.36-18H729.12
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.39
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D48.89
corpora quadrigemina, adult.CNhs10501.16-22A430.41
corpus striatum, adult.CNhs10487.19-21D825.16
corpus striatum, neonate N00.CNhs11226.630-43F140.59
cortex, adult.CNhs10473.12-14D540.50
cortex, neonate N30.CNhs11107.1392-42F255.75
diencephalon, adult.CNhs10482.20-12F235.74
diencephalon, neonate N30.CNhs11201.1388-42B239.42
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B131.88
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A233.09
epididymis, adult.CNhs10490.58-23B212.89
eyeball, adult.CNhs10484.31-12G427.15
eyeball, embryo E12.CNhs11016.345-16C619.78
eyeball, embryo E14.CNhs10521.399-16E219.77
eyeball, embryo E15.CNhs10593.426-16C922.51
eyeball, embryo E17.CNhs11023.1261-18D422.30
eyeball, neonate N00.CNhs11207.633-15C629.05
eyeball, neonate N01.CNhs11140.1532-43E723.96
eyeball, neonate N02.CNhs11205.1551-44G825.30
eyeball, neonate N16.CNhs11188.777-19A235.96
forelimb, embryo E11.CNhs10596.335-25E217.46
forelimb, embryo E12.CNhs10600.359-14H218.15
forelimb, embryo E13.CNhs10589.384-1E218.30
forelimb, embryo E14.CNhs10577.413-26A823.02
forelimb, embryo E15.CNhs11007.437-20E723.08
forelimb, embryo E17.CNhs10598.1517-43C431.69
forelimb, embryo E18.CNhs11008.1520-43B529.02
gonad, embryo E13.CNhs11044.1564-45I617.12
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D23.86
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.23
heart, embryo E11.CNhs10586.331-24E915.53
heart, embryo E12.CNhs11015.353-12F512.20
heart, embryo E13.CNhs11013.376-3I912.96
heart, embryo E14.CNhs10597.403-26D417.76
heart, embryo E15.CNhs11017.431-16C814.76
heart, embryo E16.CNhs11021.457-17C613.88
heart, embryo E17.CNhs11025.479-18E515.81
heart, embryo E18.CNhs11030.1283-20G317.97
heart, neonate N00.CNhs11213.639-21E316.58
heart, neonate N03.CNhs11221.1349-25I218.43
heart, neonate N10.CNhs11118.749-24G116.75
heart, neonate N16.CNhs11209.782-15G121.24
heart, neonate N20.CNhs11127.821-26I615.35
heart, neonate N25.CNhs11196.1351-25D318.66
heart, neonate N30.CNhs11202.1390-42D220.13
hippocampus, adult.CNhs10478.13-16E843.32
hippocampus, neonate N00.CNhs11228.627-43G131.80
intestinal mucosa, adult.CNhs10506.860-29I335.69
intestine, adult.CNhs10496.178-9A334.38
intestine, embryo E12.CNhs11019.1251-16I522.61
intestine, embryo E13.CNhs11010.381-16D519.51
intestine, embryo E15.CNhs10602.976-16D818.81
intestine, embryo E16.CNhs10585.463-22H419.36
intestine, embryo E17.CNhs10582.482-18D320.24
intestine, embryo E18.CNhs10526.1289-20F726.44
intestine, neonate N00.CNhs11126.644-26D128.47
intestine, neonate N01.CNhs11192.1322-23E931.29
intestine, neonate N06.CNhs11102.688-20B823.63
intestine, neonate N07.CNhs11095.720-20F231.24
intestine, neonate N10.CNhs11098.755-23A527.29
intestine, neonate N20.CNhs11187.827-18D126.07
intestine, neonate N25.CNhs11121.1352-25E332.85
intestine, neonate N30.CNhs11131.1384-42G130.27
kidney, embryo E14.CNhs10606.411-4I913.28
kidney, embryo E15.CNhs10997.434-16F816.11
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I221.38
kidney, embryo E18.CNhs11001.1288-20C716.87
kidney, neonate N00.CNhs11214.646-21G721.53
kidney, neonate N10.CNhs11206.758-6D525.67
kidney, neonate N20.CNhs11113.832-19I125.09
kidney, neonate N25.CNhs11122.1353-25F327.79
kidney, neonate N30.CNhs11203.1385-42H125.30
liver, adult pregnant day01.CNhs10466.508-5B217.49
liver, embryo E12.CNhs10601.355-15F823.86
liver, embryo E13.CNhs10524.378-3H624.77
liver, embryo E14.CNhs10594.409-16E125.63
liver, embryo E15.CNhs10520.433-16D732.86
liver, embryo E16.CNhs10523.462-17F529.66
liver, embryo E17.CNhs10510.481-18A323.68
liver, embryo E18.CNhs10579.499-43G421.29
liver, neonate N00.CNhs11117.641-24F427.89
liver, neonate N03.CNhs11123.1345-25G225.26
liver, neonate N06.CNhs11101.684-20A830.19
liver, neonate N07.CNhs11103.716-20H226.05
liver, neonate N10.CNhs11115.751-24B922.15
liver, neonate N20.CNhs11220.823-25A319.20
liver, neonate N25.CNhs11198.1368-26H119.91
liver, neonate N30.CNhs11106.1382-42D114.96
lung, adult.CNhs10474.28-22B121.62
lung, embryo E12.CNhs10522.354-16G219.14
lung, embryo E14.CNhs10604.404-26F820.21
lung, embryo E15.CNhs11020.432-17C515.28
lung, embryo E16.CNhs10998.458-17B621.59
lung, embryo E17.CNhs10605.480-44A619.77
lung, embryo E18.CNhs10583.1287-20I623.57
lung, neonate N00.CNhs11224.640-42C638.25
lung, neonate N06.CNhs11212.683-20E532.79
lung, neonate N07.CNhs11111.715-19A331.45
lung, neonate N10.CNhs11219.750-23E639.07
lung, neonate N20.CNhs11109.822-18A429.50
lung, neonate N25.CNhs11119.1359-25C733.85
lung, neonate N30.CNhs11133.1394-42H232.11
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A114.14
mammary gland, adult lactating day02.CNhs10480.595-22B625.08
mammary gland, adult pregnant day19.CNhs10476.588-5H223.73
medulla oblongata, adult.CNhs10477.17-12C226.33
medulla oblongata, neonate N30.CNhs11200.1396-42A338.21
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C720.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.41
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E122.72
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E218.35
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D722.46
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D823.62
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D926.33
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D518.70
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D623.72
olfactory brain, adult.CNhs10489.18-22I962.34
ovary, adult.CNhs10507.91-2I721.72
ovary, embryo E18.CNhs11040.505-44H725.46
ovary, neonate N00.CNhs11217.1299-22I428.02
oviduct, adult pregnant day01.CNhs10500.988-6G625.24
pancreas, adult.CNhs10486.34-16E417.26
pancreas, embryo E14.CNhs11012.405-44F412.38
pancreas, embryo E15.CNhs11042.1556-45F216.93
pancreas, embryo E16.CNhs11003.460-26E524.33
pancreas, embryo E17.CNhs10599.1558-45G316.54
pancreas, embryo E18.CNhs10580.1535-43I725.21
pancreas, neonate N00.CNhs11105.645-26G930.49
pancreas, neonate N01.CNhs11138.1531-43D725.08
pancreas, neonate N02.CNhs11139.1539-43D826.02
pancreas, neonate N16.CNhs11136.787-43B625.28
pancreas, neonate N25.CNhs11094.1555-45E223.19
pancreas, neonate N30.CNhs11182.1548-44H521.66
pituitary gland, adult.CNhs10493.21-1G821.79
pituitary gland, embryo E12.CNhs11018.346-16E619.99
pituitary gland, embryo E13.CNhs11009.370-44C719.40
pituitary gland, embryo E14.CNhs11037.398-44A525.93
pituitary gland, embryo E15.CNhs10592.427-16B922.70
pituitary gland, embryo E16.CNhs11036.449-43F622.47
pituitary gland, embryo E17.CNhs11039.1265-44F522.38
pituitary gland, neonate N00.CNhs11190.1308-22E919.49
placenta, adult pregnant day10.CNhs10472.539-13I731.45
placenta, adult pregnant day17.CNhs10464.577-18G341.31
prostate, adult.CNhs10470.859-1F818.52
skin, adult.CNhs10492.30-1C335.95
skin, neonate N00.CNhs11124.650-25G443.43
skin, neonate N03.CNhs11215.662-22H344.69
skin, neonate N06.CNhs11097.693-20I533.54
skin, neonate N10.CNhs11108.762-6C438.08
small intestine, neonate N16.CNhs11114.790-21I132.94
spinal cord, adult.CNhs10505.24-13C930.41
spleen, adult.CNhs10465.25-2G251.09
spleen, embryo E16.CNhs11035.461-43C120.23
spleen, embryo E18.CNhs11011.1271-21F225.00
spleen, neonate N10.CNhs11116.752-24D163.10
spleen, neonate N20.CNhs11112.824-19H163.43
spleen, neonate N25.CNhs11099.1354-25G364.52
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C613.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C911.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D311.61
stomach, adult.CNhs10503.33-1H613.37
stomach, embryo E12.CNhs10588.356-43E316.61
stomach, embryo E15.CNhs10603.1252-16G816.27
stomach, embryo E16.CNhs11022.459-17D423.33
stomach, embryo E17.CNhs11006.1035-18D522.37
stomach, embryo E18.CNhs10999.1286-20C621.84
stomach, neonate N03.CNhs11193.1340-24B826.97
stomach, neonate N07.CNhs11210.718-18A931.00
stomach, neonate N25.CNhs11104.1355-25E426.18
stomach, neonate N30.CNhs11134.1386-42I139.66
submandibular gland, adult.CNhs10469.59-29C118.64
testis, adult.CNhs10504.57-7G514.09
testis, embryo E13.CNhs11031.389-23F525.12
testis, embryo E15.CNhs11034.443-27C517.70
testis, embryo E16.CNhs11033.470-26G519.25
testis, embryo E17.CNhs11029.486-18I520.54
testis, embryo E18.CNhs11027.503-18G522.13
testis, neonate N00.CNhs11189.1300-22B725.23
testis, neonate N07.CNhs11222.726-26I427.73
testis, neonate N10.CNhs11204.763-44D924.12
testis, neonate N20.CNhs11110.839-18H312.08
testis, neonate N30.CNhs11130.1391-42E29.50
thymus, adult.CNhs10471.38-12B516.75
thymus, embryo E14.CNhs11041.402-44I419.66
thymus, embryo E15.CNhs11005.430-45I220.23
thymus, embryo E16.CNhs11002.456-26C513.77
thymus, embryo E17.CNhs10581.478-18C113.79
thymus, embryo E18.CNhs10595.1273-19G414.70
thymus, neonate N02.CNhs11181.1541-43F816.83
thymus, neonate N03.CNhs11137.2104-43C715.66
thymus, neonate N06.CNhs11197.681-26C416.46
thymus, neonate N07.CNhs11211.713-19D316.38
thymus, neonate N10.CNhs11194.748-24E415.43
thymus, neonate N20.CNhs11186.820-7A216.96
thymus, neonate N25.CNhs11125.1362-25G717.22
thymus, neonate N30.CNhs11132.1393-42G215.31
tongue, adult.CNhs10499.32-1B426.98
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H316.65
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F720.63
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G520.31
urinary bladder, adult.CNhs10481.879-12E419.90
uterus, adult pregnant day19.CNhs10497.590-15F530.03
uterus, adult.CNhs10509.92-27E529.30
vagina, adult.CNhs10502.89-27D542.23
vesicular gland, adult.CNhs10491.51-27F819.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A153.09
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A246.95
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A346.40
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D751.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A434.25
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A542.30
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A641.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A744.58
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A833.99
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A929.51
whole body, embryo E11.CNhs11014.324-5I819.20
whole body, embryo E12.CNhs10587.857-27C920.35
whole body, embryo E13.CNhs10512.372-23H219.81
whole body, embryo E14.5.CNhs10578.420-27D223.34
whole body, embryo E14.CNhs10519.395-14B125.99
whole body, embryo E16.CNhs10514.453-14F225.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G519.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G521.82
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G527.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G517.24
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G520.56
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G527.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G526.63
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G527.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G522.39
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G528.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G527.01
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G516.78
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.80
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.23
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G522.17
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.68
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G519.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G521.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G521.46
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.27
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G526.10
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G528.07
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G524.94
whole body, embryo E17.5.CNhs10513.490-9F928.36
whole body, embryo E17.CNhs10517.475-3I530.98
whole body, embryo E18.CNhs10516.493-3B327.84
whole body, neonate N00.CNhs10525.657-19C227.93
whole body, neonate N01.CNhs10576.659-23C625.25
whole body, neonate N06.CNhs10515.692-21D124.04
whole body, neonate N10.CNhs10518.761-6B423.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.22e-1195
ectoderm2.22e-1195
presumptive ectoderm2.22e-1195
ecto-epithelium4.63e-1173
regional part of nervous system2.23e-1054
gray matter6.04e-1034
central nervous system1.48e-0973
neural tube1.65e-0952
neural rod1.65e-0952
future spinal cord1.65e-0952
neural keel1.65e-0952
neurectoderm5.34e-0964
neural plate5.34e-0964
presumptive neural plate5.34e-0964
nervous system7.23e-0975
brain grey matter1.26e-0829
regional part of telencephalon1.26e-0829
telencephalon1.26e-0829
brain1.91e-0847
future brain1.91e-0847
regional part of brain6.34e-0846
anterior neural tube6.46e-0840
pre-chordal neural plate7.58e-0849
regional part of forebrain1.22e-0739
forebrain1.22e-0739
future forebrain1.22e-0739
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