FFCP PHASE1:Mm9::chr9:69885882..69885900,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=72077|HGNC=|MCL_coexpression_id=104|UniProt=Q5JCT0|association_with_transcript=0bp_to_ENSMUST00000034751,NM_028087,uc009qnt.1_5end|description=CAGE_peak_3_at_Gcnt3_5end|id=chr9:69885882..69885900,-|ontology_enrichment_celltype=CL:0000473!1.60e-08!3;CL:0000627!1.60e-08!3;CL:0000682!1.60e-08!3|ontology_enrichment_celltype_v019_2=CL:0000239,1.11e-13,6;CL:0000677,1.11e-13,6;CL:0000584,1.11e-13,6;CL:0000075,8.06e-12,7;CL:0002563,2.49e-09,9;CL:0002251,2.49e-09,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!4.95e-26!59;UBERON:0000160!9.32e-24!43;UBERON:0000344!2.89e-14!15;UBERON:0001007!3.45e-12!128;UBERON:0001555!3.45e-12!128;UBERON:0007026!3.45e-12!128;UBERON:0004119!6.58e-12!130;UBERON:0000925!6.58e-12!130;UBERON:0006595!6.58e-12!130;UBERON:0004921!3.68e-10!126;UBERON:0004185!3.68e-10!126;UBERON:0001242!3.91e-10!13;UBERON:0000060!3.91e-10!13;UBERON:0001262!3.91e-10!13;UBERON:0004786!3.91e-10!13;UBERON:0000331!2.87e-09!3;UBERON:0002116!2.87e-09!3;UBERON:0001204!2.87e-09!3;UBERON:0001168!2.87e-09!3;UBERON:0004923!2.86e-08!24;UBERON:0001962!9.27e-07!2;UBERON:0001961!9.27e-07!2;UBERON:0001744!9.27e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.06e-20,15;UBERON:0000160,1.05e-17,31;UBERON:0001242,9.19e-17,13;UBERON:0001262,9.19e-17,13;UBERON:0004786,9.19e-17,13;UBERON:0005409,1.02e-14,47;UBERON:0004923,6.26e-13,24;UBERON:0000331,1.86e-12,3;UBERON:0002116,1.86e-12,3;UBERON:0001204,1.86e-12,3;UBERON:0001168,1.86e-12,3;UBERON:0001153,1.63e-10,1;UBERON:0001045,1.63e-10,1;UBERON:0002108,1.40e-09,4;UBERON:0003350,2.49e-09,9;UBERON:0004808,2.49e-09,9;UBERON:0001277,2.49e-09,9;UBERON:0000485,9.72e-08,11;UBERON:0001007,4.64e-07,116;UBERON:0001555,4.64e-07,116;UBERON:0007026,4.64e-07,116;UBERON:0004119,6.28e-07,118;UBERON:0000925,6.28e-07,118;UBERON:0006595,6.28e-07,118|phase1_expression=0,0,2.27499619694768,0,0,1.17515490338323,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,0.91763712426868,0.57423196411502,0.86152399231815,0.215471232685889,1.71021077510736,0.756090389279792,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,2.11560453330835,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.329397909448022,0.502670417600539,0.596869416123452,0.19496408711912,0,0.864552199498777,1.1948476395262,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,5.70305882483889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p3@Gcnt3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72077 | |||
|HGNC= | |||
|MCL_coexpression_id=104 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q5JCT0 | |||
|association_with_transcript=0bp_to_ENSMUST00000034751,NM_028087,uc009qnt.1_5end | |||
|cluster_id=chr9:69885882..69885900,- | |||
|description=CAGE_peak_3_at_Gcnt3_5end | |||
|id=chr9:69885882..69885900,- | |||
|ontology_enrichment_celltype=CL:0000473!1.60e-08!3;CL:0000627!1.60e-08!3;CL:0000682!1.60e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.11e-13,6;CL:0000677,1.11e-13,6;CL:0000584,1.11e-13,6;CL:0000075,8.06e-12,7;CL:0002563,2.49e-09,9;CL:0002251,2.49e-09,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.95e-26!59;UBERON:0000160!9.32e-24!43;UBERON:0000344!2.89e-14!15;UBERON:0001007!3.45e-12!128;UBERON:0001555!3.45e-12!128;UBERON:0007026!3.45e-12!128;UBERON:0004119!6.58e-12!130;UBERON:0000925!6.58e-12!130;UBERON:0006595!6.58e-12!130;UBERON:0004921!3.68e-10!126;UBERON:0004185!3.68e-10!126;UBERON:0001242!3.91e-10!13;UBERON:0000060!3.91e-10!13;UBERON:0001262!3.91e-10!13;UBERON:0004786!3.91e-10!13;UBERON:0000331!2.87e-09!3;UBERON:0002116!2.87e-09!3;UBERON:0001204!2.87e-09!3;UBERON:0001168!2.87e-09!3;UBERON:0004923!2.86e-08!24;UBERON:0001962!9.27e-07!2;UBERON:0001961!9.27e-07!2;UBERON:0001744!9.27e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.06e-20,15;UBERON:0000160,1.05e-17,31;UBERON:0001242,9.19e-17,13;UBERON:0001262,9.19e-17,13;UBERON:0004786,9.19e-17,13;UBERON:0005409,1.02e-14,47;UBERON:0004923,6.26e-13,24;UBERON:0000331,1.86e-12,3;UBERON:0002116,1.86e-12,3;UBERON:0001204,1.86e-12,3;UBERON:0001168,1.86e-12,3;UBERON:0001153,1.63e-10,1;UBERON:0001045,1.63e-10,1;UBERON:0002108,1.40e-09,4;UBERON:0003350,2.49e-09,9;UBERON:0004808,2.49e-09,9;UBERON:0001277,2.49e-09,9;UBERON:0000485,9.72e-08,11;UBERON:0001007,4.64e-07,116;UBERON:0001555,4.64e-07,116;UBERON:0007026,4.64e-07,116;UBERON:0004119,6.28e-07,118;UBERON:0000925,6.28e-07,118;UBERON:0006595,6.28e-07,118 | |||
|phase1_expression=0,0,2.27499619694768,0,0,1.17515490338323,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,0.91763712426868,0.57423196411502,0.86152399231815,0.215471232685889,1.71021077510736,0.756090389279792,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31958806090611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,2.11560453330835,0,0,0.128867461322093,0.201683524623343,0.444756087689741,0.190225626112559,0.474529061544512,0.329397909448022,0.502670417600539,0.596869416123452,0.19496408711912,0,0.864552199498777,1.1948476395262,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,5.70305882483889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Gcnt3 | |||
}} |
Revision as of 13:31, 5 August 2015
Short description: | p3@Gcnt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gcnt3_5end |
Coexpression cluster: | MCL_coexpression_mm9:104 |
Association with transcript: | 0bp_to_ENSMUST00000034751, NM_028087, uc009qnt.1_5end |
EntrezGene: | 72077 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.11e-13 | 6 |
gut absorptive cell | 1.11e-13 | 6 |
enterocyte | 1.11e-13 | 6 |
columnar/cuboidal epithelial cell | 8.06e-12 | 7 |
intestinal epithelial cell | 2.49e-09 | 9 |
epithelial cell of alimentary canal | 2.49e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.06e-20 | 15 |
intestine | 1.05e-17 | 31 |
intestinal mucosa | 9.19e-17 | 13 |
wall of intestine | 9.19e-17 | 13 |
gastrointestinal system mucosa | 9.19e-17 | 13 |
gastrointestinal system | 1.02e-14 | 47 |
organ component layer | 6.26e-13 | 24 |
ileal mucosa | 1.86e-12 | 3 |
ileum | 1.86e-12 | 3 |
mucosa of small intestine | 1.86e-12 | 3 |
wall of small intestine | 1.86e-12 | 3 |
caecum | 1.63e-10 | 1 |
midgut | 1.63e-10 | 1 |
small intestine | 1.40e-09 | 4 |
epithelium of mucosa | 2.49e-09 | 9 |
gastrointestinal system epithelium | 2.49e-09 | 9 |
intestinal epithelium | 2.49e-09 | 9 |
simple columnar epithelium | 9.72e-08 | 11 |
digestive system | 4.64e-07 | 116 |
digestive tract | 4.64e-07 | 116 |
primitive gut | 4.64e-07 | 116 |
endoderm-derived structure | 6.28e-07 | 118 |
endoderm | 6.28e-07 | 118 |
presumptive endoderm | 6.28e-07 | 118 |