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FFCP PHASE1:Mm9::chr9:72380021..72380078,+: Difference between revisions

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{{FFCP|EntrezGene=319758|HGNC=|UniProt=F8VPJ6,Q8C1T6|association_with_transcript=0bp_to_ENSMUST00000093820,NM_001033536,uc009qqb.1_5end|description=CAGE_peak_1_at_Rfx7_5end|id=chr9:72380021..72380078,+|ontology_enrichment_celltype=CL:0000838!3.10e-08!12;CL:0000542!4.04e-08!13;CL:0000051!4.04e-08!13;CL:0000084!1.28e-07!11;CL:0000827!1.28e-07!11|ontology_enrichment_celltype_v019_2=CL:0000838,3.10e-08,12;CL:0000542,4.04e-08,13;CL:0000051,4.04e-08,13;CL:0000084,1.28e-07,11;CL:0000827,1.28e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006562!1.51e-10!24;UBERON:0001557!1.51e-10!24;UBERON:0001042!1.51e-10!24;UBERON:0008814!1.51e-10!24;UBERON:0009145!1.51e-10!24;UBERON:0002370!4.28e-10!23;UBERON:0000974!4.28e-10!23;UBERON:0004807!4.28e-10!23;UBERON:0005058!4.28e-10!23;UBERON:0003351!4.28e-10!23;UBERON:0009113!4.28e-10!23;UBERON:0003295!4.28e-10!23;UBERON:0009722!4.28e-10!23;UBERON:0005562!4.28e-10!23;UBERON:0007690!4.28e-10!23;UBERON:0003408!5.84e-10!24;UBERON:0004177!2.67e-08!29;UBERON:0000153!6.24e-08!94;UBERON:0007811!1.87e-07!86;UBERON:0000072!2.12e-07!27;UBERON:0000063!5.10e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0007811,1.10e-12,36;UBERON:0000153,8.59e-12,43;UBERON:0006562,1.51e-10,24;UBERON:0001557,1.51e-10,24;UBERON:0001042,1.51e-10,24;UBERON:0008814,1.51e-10,24;UBERON:0009145,1.51e-10,24;UBERON:0002370,4.28e-10,23;UBERON:0000974,4.28e-10,23;UBERON:0004807,4.28e-10,23;UBERON:0005058,4.28e-10,23;UBERON:0003351,4.28e-10,23;UBERON:0009113,4.28e-10,23;UBERON:0003295,4.28e-10,23;UBERON:0009722,4.28e-10,23;UBERON:0005562,4.28e-10,23;UBERON:0007690,4.28e-10,23;UBERON:0003408,5.84e-10,24;UBERON:0004177,2.67e-08,29;UBERON:0005057,2.67e-08,29;UBERON:0000072,2.12e-07,27;UBERON:0000077,5.85e-07,35|phase1_expression=16.0148847104794,9.77131141390211,13.6499771816861,23.8946726932396,26.0465779572101,16.6200479192771,17.2873354040689,28.019761186822,40.8287294239834,45.1744535801447,22.0871179010901,23.8518755396056,29.960127737961,30.2474592369731,14.6568295198892,15.5905955890166,14.6907994406911,28.2338637995623,29.3424887916281,29.7072756258621,14.2022294552287,33.758923408301,32.6499736423669,7.99962113967033,6.19405058881359,12.0588712464154,10.7690499039769,9.69620547086501,8.93110071444957,10.0812051903972,7.09537634096975,13.9706748161119,7.99584223859941,0,17.6199488048278,11.802659820453,20.8252743387616,17.1597968602132,7.0320181007142,10.470474879476,18.8234076169925,17.0761371239611,17.9638830621527,9.31636453019272,11.7597240214637,11.3798986340243,6.25913075478431,2.39827672018491,2.19686182734472,2.91644848611425,3.91961980551015,2.87505128729943,35.2343472721246,40.6202799526353,59.1525086490737,3.8588915405392,7.73640287834643,7.73508138416164,15.9830004079082,11.6378015439847,12.6766280701236,5.76035704517525,1.77858959222228,4.49949858640699,11.8663963508037,0.7104801149461,4.49400165777607,5.76327457982332,20.1157847878447,10.9354810048669,16.1950220240564,11.7116903605559,11.4851641294839,18.3736198822431,15.2394298918996,10.1114066527102,26.4278114398533,15.4501679083077,18.279177457493,15.6944682398931,14.8209982635904,19.2737947106001,12.5632349550621,10.6924895906019,13.5990440521361,28.8736013764194,21.6404954814636,21.063137378259,6.28527404665428,6.8014404096107,22.0297011413275,22.371020801516,3.39985666853875,11.3337670243942,9.74664626171504,8.06448396775204,10.8142203501449,7.6693645160126,3.89679006904303,4.24007489412408,20.703982707172,21.815501160434,45.8649431471962,56.8853362522665,7.14420435337007,7.85415582972806,4.54972000513305,15.5290076417922,32.6261733395436,15.1410981846121,10.0621489524359,10.9607572192371,8.76338889573022,10.0984169170257,16.344830291863,13.4463252722753,12.8541383221874,13.158541479712,20.3460426948471,17.3090529443728,15.2380647737672,15.0311328471919,24.2309289583559,35.4264764383972,36.4437269855412,18.13745091981,14.6174451897223,11.3981518888747,12.1987417990142,19.9221550408414,26.0775343606617,31.1622793239904,23.4662832259573,19.9458056717658,16.6230435647648,14.9261962022337,19.0439610400091,11.8186622079588,10.108910337347,21.4650693004203,20.0385482162564,17.012755728077,20.7071449276152,22.1536082218501,27.0785266622285,27.1601087003882,25.2057639065671,18.6266426932091,16.8143034487617,22.1254113796349,19.0027214097065,14.2477226077924,12.7901734643775,16.3678518265418,18.5203922767149,15.1266042782055,8.42655824775882,7.72043721344146,11.0823764764281,12.8417978972011,10.7881987591304,11.704033994966,13.7311946639422,14.3637889175605,12.0328348052155,11.39416329277,11.267482858784,14.478902453529,12.341988743511,10.9992200932994,13.1331471464286,9.79539915749726,10.7579556492615,9.93127498826751,17.0334858336943,22.433205498684,20.8163833279793,10.5780226665418,18.7693660471006,16.2565670302307,19.2012517369919,19.9666689377109,16.0112191568307,16.1691782195675,13.7613427847908,14.987604879885,15.0801125280162,13.131127154716,14.4273424468149,17.9763881730844,12.7521449426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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:319758
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:F8VPJ6,uniprot:Q8C1T6
|association_with_transcript=0bp_to_ENSMUST00000093820,NM_001033536,uc009qqb.1_5end
|cluster_id=chr9:72380021..72380078,+
|description=CAGE_peak_1_at_Rfx7_5end
|id=chr9:72380021..72380078,+
|ontology_enrichment_celltype=CL:0000838!3.10e-08!12;CL:0000542!4.04e-08!13;CL:0000051!4.04e-08!13;CL:0000084!1.28e-07!11;CL:0000827!1.28e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000838,3.10e-08,12;CL:0000542,4.04e-08,13;CL:0000051,4.04e-08,13;CL:0000084,1.28e-07,11;CL:0000827,1.28e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0006562!1.51e-10!24;UBERON:0001557!1.51e-10!24;UBERON:0001042!1.51e-10!24;UBERON:0008814!1.51e-10!24;UBERON:0009145!1.51e-10!24;UBERON:0002370!4.28e-10!23;UBERON:0000974!4.28e-10!23;UBERON:0004807!4.28e-10!23;UBERON:0005058!4.28e-10!23;UBERON:0003351!4.28e-10!23;UBERON:0009113!4.28e-10!23;UBERON:0003295!4.28e-10!23;UBERON:0009722!4.28e-10!23;UBERON:0005562!4.28e-10!23;UBERON:0007690!4.28e-10!23;UBERON:0003408!5.84e-10!24;UBERON:0004177!2.67e-08!29;UBERON:0000153!6.24e-08!94;UBERON:0007811!1.87e-07!86;UBERON:0000072!2.12e-07!27;UBERON:0000063!5.10e-07!35
|ontology_enrichment_uberon_v019_2=UBERON:0007811,1.10e-12,36;UBERON:0000153,8.59e-12,43;UBERON:0006562,1.51e-10,24;UBERON:0001557,1.51e-10,24;UBERON:0001042,1.51e-10,24;UBERON:0008814,1.51e-10,24;UBERON:0009145,1.51e-10,24;UBERON:0002370,4.28e-10,23;UBERON:0000974,4.28e-10,23;UBERON:0004807,4.28e-10,23;UBERON:0005058,4.28e-10,23;UBERON:0003351,4.28e-10,23;UBERON:0009113,4.28e-10,23;UBERON:0003295,4.28e-10,23;UBERON:0009722,4.28e-10,23;UBERON:0005562,4.28e-10,23;UBERON:0007690,4.28e-10,23;UBERON:0003408,5.84e-10,24;UBERON:0004177,2.67e-08,29;UBERON:0005057,2.67e-08,29;UBERON:0000072,2.12e-07,27;UBERON:0000077,5.85e-07,35
|phase1_expression=16.0148847104794,9.77131141390211,13.6499771816861,23.8946726932396,26.0465779572101,16.6200479192771,17.2873354040689,28.019761186822,40.8287294239834,45.1744535801447,22.0871179010901,23.8518755396056,29.960127737961,30.2474592369731,14.6568295198892,15.5905955890166,14.6907994406911,28.2338637995623,29.3424887916281,29.7072756258621,14.2022294552287,33.758923408301,32.6499736423669,7.99962113967033,6.19405058881359,12.0588712464154,10.7690499039769,9.69620547086501,8.93110071444957,10.0812051903972,7.09537634096975,13.9706748161119,7.99584223859941,0,17.6199488048278,11.802659820453,20.8252743387616,17.1597968602132,7.0320181007142,10.470474879476,18.8234076169925,17.0761371239611,17.9638830621527,9.31636453019272,11.7597240214637,11.3798986340243,6.25913075478431,2.39827672018491,2.19686182734472,2.91644848611425,3.91961980551015,2.87505128729943,35.2343472721246,40.6202799526353,59.1525086490737,3.8588915405392,7.73640287834643,7.73508138416164,15.9830004079082,11.6378015439847,12.6766280701236,5.76035704517525,1.77858959222228,4.49949858640699,11.8663963508037,0.7104801149461,4.49400165777607,5.76327457982332,20.1157847878447,10.9354810048669,16.1950220240564,11.7116903605559,11.4851641294839,18.3736198822431,15.2394298918996,10.1114066527102,26.4278114398533,15.4501679083077,18.279177457493,15.6944682398931,14.8209982635904,19.2737947106001,12.5632349550621,10.6924895906019,13.5990440521361,28.8736013764194,21.6404954814636,21.063137378259,6.28527404665428,6.8014404096107,22.0297011413275,22.371020801516,3.39985666853875,11.3337670243942,9.74664626171504,8.06448396775204,10.8142203501449,7.6693645160126,3.89679006904303,4.24007489412408,20.703982707172,21.815501160434,45.8649431471962,56.8853362522665,7.14420435337007,7.85415582972806,4.54972000513305,15.5290076417922,32.6261733395436,15.1410981846121,10.0621489524359,10.9607572192371,8.76338889573022,10.0984169170257,16.344830291863,13.4463252722753,12.8541383221874,13.158541479712,20.3460426948471,17.3090529443728,15.2380647737672,15.0311328471919,24.2309289583559,35.4264764383972,36.4437269855412,18.13745091981,14.6174451897223,11.3981518888747,12.1987417990142,19.9221550408414,26.0775343606617,31.1622793239904,23.4662832259573,19.9458056717658,16.6230435647648,14.9261962022337,19.0439610400091,11.8186622079588,10.108910337347,21.4650693004203,20.0385482162564,17.012755728077,20.7071449276152,22.1536082218501,27.0785266622285,27.1601087003882,25.2057639065671,18.6266426932091,16.8143034487617,22.1254113796349,19.0027214097065,14.2477226077924,12.7901734643775,16.3678518265418,18.5203922767149,15.1266042782055,8.42655824775882,7.72043721344146,11.0823764764281,12.8417978972011,10.7881987591304,11.704033994966,13.7311946639422,14.3637889175605,12.0328348052155,11.39416329277,11.267482858784,14.478902453529,12.341988743511,10.9992200932994,13.1331471464286,9.79539915749726,10.7579556492615,9.93127498826751,17.0334858336943,22.433205498684,20.8163833279793,10.5780226665418,18.7693660471006,16.2565670302307,19.2012517369919,19.9666689377109,16.0112191568307,16.1691782195675,13.7613427847908,14.987604879885,15.0801125280162,13.131127154716,14.4273424468149,17.9763881730844,12.752144942607,16.5287256801125,11.0007382552787,18.0512649923372,15.7790829942313,18.5322708339236,17.2617713579187,20.8303385074246,15.9356073553128,15.941895981797,13.9728867778824,10.8589504251184,10.0793893209631,16.017130148745,10.614185736113,11.6928298440124,12.7801876474757,12.3000351473733,10.6942857748196,14.9601991474422,12.6465476884528,6.86403532970204,35.9420516318386,10.0478055870496,12.1694692514679,10.1031551178845,11.1226396383586,12.5435315554475,13.4869828821621,13.4538902357044,17.1113225264127,14.7678224624414,13.1426539041561,15.410575684647,15.9489239393629,12.2934198150413,16.5516901311501,11.7376285513851,15.3076577911188,16.3863314715738,15.5416483679306,13.8863096238251,1.50791283939272,4.89515115436839,16.2282210096282,14.0727740615414,19.266070798535,14.7686725106176,8.85248705034047,16.1581393410799,17.3529520678941,16.0079885161622,22.8348801596767,21.7461606136822,24.7306528231457,27.4584234865167,19.02610297872,22.7959569170823,16.2067988958075,35.3453448063988,23.5620541445726,9.25941139069727,19.3835481630756,22.7658769702099,22.5666735177937,11.4106898992841,10.883648050731,11.5049098651098,10.6308681437078,16.908933136916,17.8315522286073,13.8142817201452,13.9033977570041,14.2216541071117,20.0295356292498,17.5330423521918,19.0646179222121,16.9257428389432,8.14959707831353,10.7168517515796,16.6699819623737,10.3453914209201,13.1639216481697,8.52501857520878,9.62154003061212,10.3797714723272,16.3191014560672,39.5727007059552,20.9903754704677,19.722326451507,18.8608303524956,20.1893306686425,15.7399651780119,17.4299783889879,20.846247457338,13.002372681683,12.5932278611404,11.4904758772862,19.1371918809435,17.1583629904892,24.1369370591275,23.7917468950219,23.493995546752,8.59203556213602,20.0873355924021,19.1120299099238,15.4447637375176,16.0997987931141,13.1017538247707,13.6212989848669,16.5306911450672,15.1818446350737,16.5907165813495,17.3975007664339,16.9107881605257,13.755522236046,12.5748452747394,14.0004855607714,9.68698676082983,15.0370951686793,15.0217265466565,21.2233147295639,18.9795413410537,24.6415803242526,21.0261904568242,52.1418349036494,10.9471616256689,14.4822449602406,18.4487568628469,20.7670966974278,30.1995659267523,27.043976141993,26.5841148914239,22.9193841382295,30.1016886287249,28.8362889491364,33.4280530937351,33.577932732475,41.0237926657307,24.713611814058,16.2049745963067,11.0348043629655,12.927115460034,15.6483571166074,13.8885031833875,19.7803754208646,19.0787857380369,18.5581678493084,20.3310663342144,13.3494318587081,9.16632821503035,14.7793736815571,17.8121455140367,24.1726047164704,14.1754725048679,18.0128481289688,19.4851235863208,24.8524949640874,19.8233833885777,26.7346665178691,19.4636310559713,19.6916440825318,18.8651846365184,17.4651333027513,16.4462578573195,18.1310850370227,19.2551525755089,22.2373546352142,18.5039888919875,19.9943921869241,20.6011316433741,22.7929542561335,21.9403491410443,22.8620971815875,18.6573764771217,20.4483773691527,22.2526386433786,20.019053138278,20.5721551431249,17.9250564220931,17.1674056762071,18.8950341622027,18.8218760830661,21.4074957965942,21.5855007989872,10.2597187460759,18.6051635968831,13.4674145197857,24.0829086792073,22.1635085345018,15.5507796404482,15.9584946421545,23.148793317737,21.2338991247254,18.7145286756327,22.5614606750713,19.1288332068843,16.1031735957246,15.5351449865682
|short_description=p1@Rfx7
}}

Revision as of 14:31, 5 August 2015

Short description:p1@Rfx7
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rfx7_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000093820, NM_001033536, uc009qqb.1_5end
EntrezGene:319758
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rfx7

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.77
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I613.65
CD326+ enterocyte, pool1.CNhs13542.11848-124I323.89
CD326+ enterocyte, pool2.CNhs13197.11849-124I426.05
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I716.62
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.29
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E928.02
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E740.83
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F245.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E622.09
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F123.85
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E429.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E830.25
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A114.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A315.59
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A514.69
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A228.23
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A429.34
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A629.71
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H233.76
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I932.65
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D26.19
GP2+ M cell, pool1.CNhs13228.11845-124H912.06
GP2+ M cell, pool2.CNhs13231.11846-124I110.77
GP2+ M cell, pool3.CNhs13240.11847-124I29.70
Ileum epithelium, pool1.CNhs13199.10252-104B98.93
Ileum epithelium, pool2.CNhs13232.10253-104C110.08
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C87.10
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I313.97
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F517.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.80
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F720.83
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G817.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H310.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G918.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H217.08
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H417.96
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.32
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.76
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.38
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.92
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.92
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A235.23
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I940.62
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A159.15
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E17.74
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C57.74
Mouse Granule cells, donor1.CNhs12131.11713-123C315.98
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C712.68
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.76
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C74.50
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D520.12
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F510.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D916.20
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F111.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D511.49
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D218.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F215.24
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.45
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D718.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D819.27
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D628.87
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F621.64
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E121.06
Mouse Schwann, donor1.CNhs12507.11728-123D96.29
Mouse Schwann, donor2.CNhs12573.11746-123F96.80
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G322.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F722.37
Mouse hepatocyte, donor1.CNhs13078.11714-123C43.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C811.33
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.75
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.81
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H121.82
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I845.86
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B656.89
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.14
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G27.85
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B615.53
accessory axillary lymph node, adult.CNhs10475.1063-29H932.63
adrenal gland, adult.CNhs10508.49-24D715.14
adrenal gland, embryo E14.CNhs11038.406-44C510.06
adrenal gland, embryo E16.CNhs11004.1254-43D610.96
adrenal gland, embryo E17.CNhs11043.1263-45I18.76
adrenal gland, embryo E18.CNhs11026.1262-18F510.10
adrenal gland, neonate N00.CNhs11191.1311-23C116.34
adrenal gland, neonate N25.CNhs11223.1377-27I313.45
amnion, adult pregnant day17.5.CNhs10488.583-22A812.85
aorta, adult.CNhs10498.46-23H113.16
bone (os femoris), adult.CNhs10483.56-12G220.35
bone (os femoris), neonate N02.CNhs11227.1985-43F517.31
bone (os femoris), neonate N16.CNhs11225.1525-43A615.24
bone (os femoris), neonate N20.CNhs11195.1350-25C315.03
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B235.43
cerebellum, neonate N30.CNhs11135.1395-42I236.44
colon, adult.CNhs10468.36-18H718.14
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C714.62
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D111.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D412.20
corpora quadrigemina, adult.CNhs10501.16-22A419.92
corpus striatum, adult.CNhs10487.19-21D826.08
corpus striatum, neonate N00.CNhs11226.630-43F131.16
cortex, adult.CNhs10473.12-14D523.47
cortex, neonate N30.CNhs11107.1392-42F219.95
diencephalon, adult.CNhs10482.20-12F216.62
diencephalon, neonate N30.CNhs11201.1388-42B214.93
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B119.04
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A211.82
epididymis, adult.CNhs10490.58-23B210.11
eyeball, adult.CNhs10484.31-12G421.47
eyeball, embryo E12.CNhs11016.345-16C620.04
eyeball, embryo E14.CNhs10521.399-16E217.01
eyeball, embryo E15.CNhs10593.426-16C920.71
eyeball, embryo E17.CNhs11023.1261-18D422.15
eyeball, neonate N00.CNhs11207.633-15C627.08
eyeball, neonate N01.CNhs11140.1532-43E727.16
eyeball, neonate N02.CNhs11205.1551-44G825.21
eyeball, neonate N16.CNhs11188.777-19A218.63
forelimb, embryo E11.CNhs10596.335-25E216.81
forelimb, embryo E12.CNhs10600.359-14H222.13
forelimb, embryo E13.CNhs10589.384-1E219.00
forelimb, embryo E14.CNhs10577.413-26A814.25
forelimb, embryo E15.CNhs11007.437-20E712.79
forelimb, embryo E17.CNhs10598.1517-43C416.37
forelimb, embryo E18.CNhs11008.1520-43B518.52
gonad, embryo E13.CNhs11044.1564-45I615.13
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.72
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.08
heart, embryo E11.CNhs10586.331-24E912.84
heart, embryo E12.CNhs11015.353-12F510.79
heart, embryo E13.CNhs11013.376-3I911.70
heart, embryo E14.CNhs10597.403-26D413.73
heart, embryo E15.CNhs11017.431-16C814.36
heart, embryo E16.CNhs11021.457-17C612.03
heart, embryo E17.CNhs11025.479-18E511.39
heart, embryo E18.CNhs11030.1283-20G311.27
heart, neonate N00.CNhs11213.639-21E314.48
heart, neonate N03.CNhs11221.1349-25I212.34
heart, neonate N10.CNhs11118.749-24G111.00
heart, neonate N16.CNhs11209.782-15G113.13
heart, neonate N20.CNhs11127.821-26I69.80
heart, neonate N25.CNhs11196.1351-25D310.76
heart, neonate N30.CNhs11202.1390-42D29.93
hippocampus, adult.CNhs10478.13-16E817.03
hippocampus, neonate N00.CNhs11228.627-43G122.43
intestinal mucosa, adult.CNhs10506.860-29I320.82
intestine, adult.CNhs10496.178-9A310.58
intestine, embryo E12.CNhs11019.1251-16I518.77
intestine, embryo E13.CNhs11010.381-16D516.26
intestine, embryo E15.CNhs10602.976-16D819.20
intestine, embryo E16.CNhs10585.463-22H419.97
intestine, embryo E17.CNhs10582.482-18D316.01
intestine, embryo E18.CNhs10526.1289-20F716.17
intestine, neonate N00.CNhs11126.644-26D113.76
intestine, neonate N01.CNhs11192.1322-23E914.99
intestine, neonate N06.CNhs11102.688-20B815.08
intestine, neonate N07.CNhs11095.720-20F213.13
intestine, neonate N10.CNhs11098.755-23A514.43
intestine, neonate N20.CNhs11187.827-18D117.98
intestine, neonate N25.CNhs11121.1352-25E312.75
intestine, neonate N30.CNhs11131.1384-42G116.53
kidney, embryo E14.CNhs10606.411-4I911.00
kidney, embryo E15.CNhs10997.434-16F818.05
kidney, embryo E16.CNhs10584.464-22A515.78
kidney, embryo E17.CNhs11028.483-18I218.53
kidney, embryo E18.CNhs11001.1288-20C717.26
kidney, neonate N00.CNhs11214.646-21G720.83
kidney, neonate N10.CNhs11206.758-6D515.94
kidney, neonate N20.CNhs11113.832-19I115.94
kidney, neonate N25.CNhs11122.1353-25F313.97
kidney, neonate N30.CNhs11203.1385-42H110.86
liver, adult pregnant day01.CNhs10466.508-5B210.08
liver, embryo E12.CNhs10601.355-15F816.02
liver, embryo E13.CNhs10524.378-3H610.61
liver, embryo E14.CNhs10594.409-16E111.69
liver, embryo E15.CNhs10520.433-16D712.78
liver, embryo E16.CNhs10523.462-17F512.30
liver, embryo E17.CNhs10510.481-18A310.69
liver, embryo E18.CNhs10579.499-43G414.96
liver, neonate N00.CNhs11117.641-24F412.65
liver, neonate N03.CNhs11123.1345-25G26.86
liver, neonate N06.CNhs11101.684-20A835.94
liver, neonate N07.CNhs11103.716-20H210.05
liver, neonate N10.CNhs11115.751-24B912.17
liver, neonate N20.CNhs11220.823-25A310.10
liver, neonate N25.CNhs11198.1368-26H111.12
liver, neonate N30.CNhs11106.1382-42D112.54
lung, adult.CNhs10474.28-22B113.49
lung, embryo E12.CNhs10522.354-16G213.45
lung, embryo E14.CNhs10604.404-26F817.11
lung, embryo E15.CNhs11020.432-17C514.77
lung, embryo E16.CNhs10998.458-17B613.14
lung, embryo E17.CNhs10605.480-44A615.41
lung, embryo E18.CNhs10583.1287-20I615.95
lung, neonate N00.CNhs11224.640-42C612.29
lung, neonate N06.CNhs11212.683-20E516.55
lung, neonate N07.CNhs11111.715-19A311.74
lung, neonate N10.CNhs11219.750-23E615.31
lung, neonate N20.CNhs11109.822-18A416.39
lung, neonate N25.CNhs11119.1359-25C715.54
lung, neonate N30.CNhs11133.1394-42H213.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B616.23
mammary gland, adult pregnant day19.CNhs10476.588-5H214.07
medulla oblongata, adult.CNhs10477.17-12C219.27
medulla oblongata, neonate N30.CNhs11200.1396-42A314.77
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C78.85
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C216.16
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.35
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.01
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E322.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D721.75
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D824.73
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D927.46
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.03
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D522.80
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D616.21
olfactory brain, adult.CNhs10489.18-22I935.35
ovary, adult.CNhs10507.91-2I723.56
ovary, embryo E18.CNhs11040.505-44H79.26
ovary, neonate N00.CNhs11217.1299-22I419.38
oviduct, adult pregnant day01.CNhs10500.988-6G622.77
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F411.41
pancreas, embryo E15.CNhs11042.1556-45F210.88
pancreas, embryo E16.CNhs11003.460-26E511.50
pancreas, embryo E17.CNhs10599.1558-45G310.63
pancreas, embryo E18.CNhs10580.1535-43I716.91
pancreas, neonate N00.CNhs11105.645-26G917.83
pancreas, neonate N01.CNhs11138.1531-43D713.81
pancreas, neonate N02.CNhs11139.1539-43D813.90
pancreas, neonate N16.CNhs11136.787-43B614.22
pancreas, neonate N25.CNhs11094.1555-45E220.03
pancreas, neonate N30.CNhs11182.1548-44H517.53
pituitary gland, adult.CNhs10493.21-1G819.06
pituitary gland, embryo E12.CNhs11018.346-16E616.93
pituitary gland, embryo E13.CNhs11009.370-44C78.15
pituitary gland, embryo E14.CNhs11037.398-44A510.72
pituitary gland, embryo E15.CNhs10592.427-16B916.67
pituitary gland, embryo E16.CNhs11036.449-43F610.35
pituitary gland, embryo E17.CNhs11039.1265-44F513.16
pituitary gland, neonate N00.CNhs11190.1308-22E98.53
placenta, adult pregnant day10.CNhs10472.539-13I79.62
placenta, adult pregnant day17.CNhs10464.577-18G310.38
prostate, adult.CNhs10470.859-1F816.32
skin, adult.CNhs10492.30-1C339.57
skin, neonate N00.CNhs11124.650-25G420.99
skin, neonate N03.CNhs11215.662-22H319.72
skin, neonate N06.CNhs11097.693-20I518.86
skin, neonate N10.CNhs11108.762-6C420.19
small intestine, neonate N16.CNhs11114.790-21I115.74
spinal cord, adult.CNhs10505.24-13C917.43
spleen, adult.CNhs10465.25-2G220.85
spleen, embryo E16.CNhs11035.461-43C113.00
spleen, embryo E18.CNhs11011.1271-21F212.59
spleen, neonate N10.CNhs11116.752-24D111.49
spleen, neonate N20.CNhs11112.824-19H119.14
spleen, neonate N25.CNhs11099.1354-25G317.16
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C624.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C923.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D323.49
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E320.09
stomach, embryo E15.CNhs10603.1252-16G819.11
stomach, embryo E16.CNhs11022.459-17D415.44
stomach, embryo E17.CNhs11006.1035-18D516.10
stomach, embryo E18.CNhs10999.1286-20C613.10
stomach, neonate N03.CNhs11193.1340-24B813.62
stomach, neonate N07.CNhs11210.718-18A916.53
stomach, neonate N25.CNhs11104.1355-25E415.18
stomach, neonate N30.CNhs11134.1386-42I116.59
submandibular gland, adult.CNhs10469.59-29C117.40
testis, adult.CNhs10504.57-7G516.91
testis, embryo E13.CNhs11031.389-23F513.76
testis, embryo E15.CNhs11034.443-27C512.57
testis, embryo E16.CNhs11033.470-26G514.00
testis, embryo E17.CNhs11029.486-18I59.69
testis, embryo E18.CNhs11027.503-18G515.04
testis, neonate N00.CNhs11189.1300-22B715.02
testis, neonate N07.CNhs11222.726-26I421.22
testis, neonate N10.CNhs11204.763-44D918.98
testis, neonate N20.CNhs11110.839-18H324.64
testis, neonate N30.CNhs11130.1391-42E221.03
thymus, adult.CNhs10471.38-12B552.14
thymus, embryo E14.CNhs11041.402-44I410.95
thymus, embryo E15.CNhs11005.430-45I214.48
thymus, embryo E16.CNhs11002.456-26C518.45
thymus, embryo E17.CNhs10581.478-18C120.77
thymus, embryo E18.CNhs10595.1273-19G430.20
thymus, neonate N02.CNhs11181.1541-43F827.04
thymus, neonate N03.CNhs11137.2104-43C726.58
thymus, neonate N06.CNhs11197.681-26C422.92
thymus, neonate N07.CNhs11211.713-19D330.10
thymus, neonate N10.CNhs11194.748-24E428.84
thymus, neonate N20.CNhs11186.820-7A233.43
thymus, neonate N25.CNhs11125.1362-25G733.58
thymus, neonate N30.CNhs11132.1393-42G241.02
tongue, adult.CNhs10499.32-1B424.71
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H316.20
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.03
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G512.93
urinary bladder, adult.CNhs10481.879-12E415.65
uterus, adult pregnant day19.CNhs10497.590-15F513.89
uterus, adult.CNhs10509.92-27E519.78
vagina, adult.CNhs10502.89-27D519.08
vesicular gland, adult.CNhs10491.51-27F818.56
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A120.33
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.35
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.78
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.81
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.17
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.18
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.01
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A924.85
whole body, embryo E11.CNhs11014.324-5I819.82
whole body, embryo E12.CNhs10587.857-27C926.73
whole body, embryo E13.CNhs10512.372-23H219.46
whole body, embryo E14.5.CNhs10578.420-27D219.69
whole body, embryo E14.CNhs10519.395-14B118.87
whole body, embryo E16.CNhs10514.453-14F217.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G516.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.13
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.26
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G522.24
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.50
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G519.99
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G520.60
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G522.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G521.94
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G522.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.66
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.45
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G522.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.02
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G520.57
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.93
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.17
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G518.90
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.82
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G521.41
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G521.59
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G510.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.61
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G524.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G522.16
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.96
whole body, embryo E17.5.CNhs10513.490-9F923.15
whole body, embryo E17.CNhs10517.475-3I521.23
whole body, embryo E18.CNhs10516.493-3B318.71
whole body, neonate N00.CNhs10525.657-19C222.56
whole body, neonate N01.CNhs10576.659-23C619.13
whole body, neonate N06.CNhs10515.692-21D116.10
whole body, neonate N10.CNhs10518.761-6B415.54





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell3.10e-0812
lymphocyte4.04e-0813
common lymphoid progenitor4.04e-0813
T cell1.28e-0711
pro-T cell1.28e-0711
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