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FFCP PHASE1:Mm9::chr6:34659610..34659635,+: Difference between revisions

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{{FFCP|EntrezGene=109624|HGNC=|MCL_coexpression_id=2529|UniProt=D3Z6I7|association_with_transcript=0bp_to_ENSMUST00000031775_5end|description=CAGE_peak_3_at_Cald1_5end|id=chr6:34659610..34659635,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!1.85e-16!47;UBERON:0002107!2.04e-13!22;UBERON:0007499!2.04e-13!22;UBERON:0006925!2.04e-13!22;UBERON:0009497!2.04e-13!22;UBERON:0000015!2.04e-13!22;UBERON:0002423!2.04e-13!22;UBERON:0006235!2.04e-13!22;UBERON:0008835!2.04e-13!22;UBERON:0003894!2.04e-13!22;UBERON:0004161!2.04e-13!22;UBERON:0008836!2.04e-13!22;UBERON:0002365!9.86e-13!25;UBERON:0002330!9.86e-13!25;UBERON:0009854!5.57e-12!23;UBERON:0009856!5.57e-12!23;UBERON:0005256!1.67e-09!47;UBERON:0009569!3.24e-08!66;UBERON:0000466!3.39e-07!79;UBERON:0000468!3.60e-07!333;UBERON:0002100!7.60e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.62e-16,47;UBERON:0002107,1.34e-13,22;UBERON:0007499,1.34e-13,22;UBERON:0006925,1.34e-13,22;UBERON:0009497,1.34e-13,22;UBERON:0000015,1.34e-13,22;UBERON:0002423,1.34e-13,22;UBERON:0006235,1.34e-13,22;UBERON:0008835,1.34e-13,22;UBERON:0003894,1.34e-13,22;UBERON:0004161,1.34e-13,22;UBERON:0008836,1.34e-13,22;UBERON:0002365,6.63e-13,25;UBERON:0002330,6.63e-13,25;UBERON:0009854,2.89e-12,23;UBERON:0009856,2.89e-12,23;UBERON:0005256,1.00e-10,45;UBERON:0002100,1.10e-08,90;UBERON:0005177,7.19e-08,79;UBERON:0009569,1.41e-07,66;UBERON:0003104,4.13e-07,61;UBERON:0009142,4.13e-07,61|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0,0,1.53077922271926,0,0,0.47997726838022,0.45881856213434,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6686017794085,20.680893968781,29.1839335937074,1.56478268869608,2.8343270329458,14.9386604259441,14.9711022287198,7.13930750289349,4.31257693094915,0,0,0,98.5303640017677,30.3725446335082,30.4246534443691,0.404632921719196,0,0.633831403506179,14.5703148789727,10.6715375533337,2.2497492932035,0.988866362566974,1.4209602298922,0.599200221036809,2.30530983192933,0.414758449233911,0.540023753326763,1.47227472945967,0.285650984403804,0.441737081903227,0.122490799214954,0.191690942036473,0,0,0.766124028511126,1.0752457327937,1.05509030184155,1.28082701043374,0,0,0,1.06958773443767,2.06240009831567,0.569486723196412,0.745597783301202,3.93776205332557,10.4288752947364,25.7979394944493,46.4628893569949,82.2765313786378,118.73470216032,100.715344704389,52.4191457903883,24.1564402626613,4.94247935476367,5.19572009205738,4.94675404314476,0.14084341977668,7.69958864485907,15.2883143823987,7.11066703153331,2.38140145112336,1.52015919285059,7.58286667522175,22.6084081843739,19.1614033898907,1.63286352971307,6.07198643681475,7.91610243611567,5.30415643688935,6.0289056221049,9.7598626922635,2.89033160058254,20.0227923864843,5.06097749219691,0,9.38247729694973,1.54589062922275,2.90925151881133,0,3.22058876712702,3.14170060220183,1.53274233125155,0,0,0,1.3481157546434,1.37250180845588,0.376963056338593,1.04294592115366,0.767146371990992,1.66230435647648,1.78465389374533,6.31404055871961,2.98576729464223,0.505445516867349,33.6706969418358,12.3614420814569,2.75882525320168,8.10279584124071,7.08312643827861,7.41597840749474,9.99287018221828,6.09061209638237,16.298312356558,8.40715172438085,9.8335161687266,9.32540958068929,6.1374805079721,6.95118123063995,5.92028683087683,4.11564272815887,9.35461054046918,0,0,0,18.4341937556597,16.6513502586578,16.0255234700303,13.7311946639422,15.3476100762975,11.415766353666,11.1616293480196,9.38956904898667,12.6106569756543,6.7469538464527,5.74586124276833,4.13450928683864,3.36259971078264,4.83010253640311,5.90508242545636,1.47202963994889,1.74937841044784,0,2.3800550999719,7.25180051819795,3.48355007790658,6.31450560478257,4.63872106633688,6.44896327150124,3.80451252225118,3.32170343081158,4.44687177754829,7.03738584640755,7.75930240960488,5.65395852645448,7.19055526923377,5.18731319699266,3.18626037206988,3.41402221715547,7.19765629441292,3.38123207019241,4.68398054044223,3.29719228184964,6.59276706968994,4.7427402843193,0.885660887877613,2.511979645462,2.71473760627961,71.74153575509,9.84386123724955,13.9556886530374,12.5922782935518,17.2431103180227,18.5706413009361,21.3885715496393,27.9065253327286,42.3172941882842,70.836844602525,175.397211963373,98.6173511321534,84.2501717409313,94.7170792301669,96.3364110612668,86.3573903240427,6.09685527549795,7.57965647081939,9.77789858652155,9.33597971763535,7.27539769694356,6.70025029767263,11.1880511216426,17.3668946593441,21.2807444543358,24.3611158613652,16.7427507090361,5.40748938561935,7.08008425650172,8.53429445630918,0,0,3.93411418415229,2.75936746304733,1.44495530989013,1.75817529888305,23.7705670796179,3.02965112645248,17.3529520678941,16.3984272604588,16.1567548299599,12.1874086955802,13.590719119026,11.0399847007645,12.9539424535966,19.8733983379692,18.1832377855401,1.60660658210904,3.40656204499845,2.4929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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:109624
|HGNC=
|MCL_coexpression_id=2529
|TSSclassifier=NA
|UniProt=uniprot:D3Z6I7
|association_with_transcript=0bp_to_ENSMUST00000031775_5end
|cluster_id=chr6:34659610..34659635,+
|description=CAGE_peak_3_at_Cald1_5end
|id=chr6:34659610..34659635,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!1.85e-16!47;UBERON:0002107!2.04e-13!22;UBERON:0007499!2.04e-13!22;UBERON:0006925!2.04e-13!22;UBERON:0009497!2.04e-13!22;UBERON:0000015!2.04e-13!22;UBERON:0002423!2.04e-13!22;UBERON:0006235!2.04e-13!22;UBERON:0008835!2.04e-13!22;UBERON:0003894!2.04e-13!22;UBERON:0004161!2.04e-13!22;UBERON:0008836!2.04e-13!22;UBERON:0002365!9.86e-13!25;UBERON:0002330!9.86e-13!25;UBERON:0009854!5.57e-12!23;UBERON:0009856!5.57e-12!23;UBERON:0005256!1.67e-09!47;UBERON:0009569!3.24e-08!66;UBERON:0000466!3.39e-07!79;UBERON:0000468!3.60e-07!333;UBERON:0002100!7.60e-07!98
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.62e-16,47;UBERON:0002107,1.34e-13,22;UBERON:0007499,1.34e-13,22;UBERON:0006925,1.34e-13,22;UBERON:0009497,1.34e-13,22;UBERON:0000015,1.34e-13,22;UBERON:0002423,1.34e-13,22;UBERON:0006235,1.34e-13,22;UBERON:0008835,1.34e-13,22;UBERON:0003894,1.34e-13,22;UBERON:0004161,1.34e-13,22;UBERON:0008836,1.34e-13,22;UBERON:0002365,6.63e-13,25;UBERON:0002330,6.63e-13,25;UBERON:0009854,2.89e-12,23;UBERON:0009856,2.89e-12,23;UBERON:0005256,1.00e-10,45;UBERON:0002100,1.10e-08,90;UBERON:0005177,7.19e-08,79;UBERON:0009569,1.41e-07,66;UBERON:0003104,4.13e-07,61;UBERON:0009142,4.13e-07,61
|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0,0,1.53077922271926,0,0,0.47997726838022,0.45881856213434,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,23.6686017794085,20.680893968781,29.1839335937074,1.56478268869608,2.8343270329458,14.9386604259441,14.9711022287198,7.13930750289349,4.31257693094915,0,0,0,98.5303640017677,30.3725446335082,30.4246534443691,0.404632921719196,0,0.633831403506179,14.5703148789727,10.6715375533337,2.2497492932035,0.988866362566974,1.4209602298922,0.599200221036809,2.30530983192933,0.414758449233911,0.540023753326763,1.47227472945967,0.285650984403804,0.441737081903227,0.122490799214954,0.191690942036473,0,0,0.766124028511126,1.0752457327937,1.05509030184155,1.28082701043374,0,0,0,1.06958773443767,2.06240009831567,0.569486723196412,0.745597783301202,3.93776205332557,10.4288752947364,25.7979394944493,46.4628893569949,82.2765313786378,118.73470216032,100.715344704389,52.4191457903883,24.1564402626613,4.94247935476367,5.19572009205738,4.94675404314476,0.14084341977668,7.69958864485907,15.2883143823987,7.11066703153331,2.38140145112336,1.52015919285059,7.58286667522175,22.6084081843739,19.1614033898907,1.63286352971307,6.07198643681475,7.91610243611567,5.30415643688935,6.0289056221049,9.7598626922635,2.89033160058254,20.0227923864843,5.06097749219691,0,9.38247729694973,1.54589062922275,2.90925151881133,0,3.22058876712702,3.14170060220183,1.53274233125155,0,0,0,1.3481157546434,1.37250180845588,0.376963056338593,1.04294592115366,0.767146371990992,1.66230435647648,1.78465389374533,6.31404055871961,2.98576729464223,0.505445516867349,33.6706969418358,12.3614420814569,2.75882525320168,8.10279584124071,7.08312643827861,7.41597840749474,9.99287018221828,6.09061209638237,16.298312356558,8.40715172438085,9.8335161687266,9.32540958068929,6.1374805079721,6.95118123063995,5.92028683087683,4.11564272815887,9.35461054046918,0,0,0,18.4341937556597,16.6513502586578,16.0255234700303,13.7311946639422,15.3476100762975,11.415766353666,11.1616293480196,9.38956904898667,12.6106569756543,6.7469538464527,5.74586124276833,4.13450928683864,3.36259971078264,4.83010253640311,5.90508242545636,1.47202963994889,1.74937841044784,0,2.3800550999719,7.25180051819795,3.48355007790658,6.31450560478257,4.63872106633688,6.44896327150124,3.80451252225118,3.32170343081158,4.44687177754829,7.03738584640755,7.75930240960488,5.65395852645448,7.19055526923377,5.18731319699266,3.18626037206988,3.41402221715547,7.19765629441292,3.38123207019241,4.68398054044223,3.29719228184964,6.59276706968994,4.7427402843193,0.885660887877613,2.511979645462,2.71473760627961,71.74153575509,9.84386123724955,13.9556886530374,12.5922782935518,17.2431103180227,18.5706413009361,21.3885715496393,27.9065253327286,42.3172941882842,70.836844602525,175.397211963373,98.6173511321534,84.2501717409313,94.7170792301669,96.3364110612668,86.3573903240427,6.09685527549795,7.57965647081939,9.77789858652155,9.33597971763535,7.27539769694356,6.70025029767263,11.1880511216426,17.3668946593441,21.2807444543358,24.3611158613652,16.7427507090361,5.40748938561935,7.08008425650172,8.53429445630918,0,0,3.93411418415229,2.75936746304733,1.44495530989013,1.75817529888305,23.7705670796179,3.02965112645248,17.3529520678941,16.3984272604588,16.1567548299599,12.1874086955802,13.590719119026,11.0399847007645,12.9539424535966,19.8733983379692,18.1832377855401,1.60660658210904,3.40656204499845,2.49291845134157,4.39794790254655,4.12425307431339,11.9470624505967,3.8844901784797,2.41858845571801,6.22396763194464,7.97315110778086,8.60818414242997,4.65170927702798,2.18120237686503,4.63446591900138,5.37262488490887,7.37930260024991,6.18813259489121,3.06395645178409,5.40183282093931,3.62204314591713,7.07312215604255,7.44828981297549,9.0968096977056,7.56925494769756,3.04464949114599,141.03769654629,92.3587828966256,3.96951116498931,32.977250588296,5.8127193610526,9.46912921372047,18.8608303524956,52.8533697179097,4.08073171281791,1.29797711407357,0.854354403989263,4.33412422722767,2.59272338317596,0.753473828018764,0.546776910884101,0.915112692826091,0,0,0,2.86401185404534,5.3777118908793,2.43983360552218,1.83609079397062,1.46361807210128,4.36725127492355,6.74321731924104,12.8939390931524,3.40282724579238,3.75883422546199,22.9895545842163,0,8.52244312450679,3.97100377097034,2.33341426012857,2.84151611651008,3.37912250981556,2.93393096614385,3.6457227756306,1.99232754408851,0.241584120826006,0.288030006257865,0.316011120628178,3.04087822935246,3.3894615864393,2.33857481360031,2.68540043501222,1.58945083825012,1.08175904567972,0.295379054349154,0.807731599585181,0.15241361331,0.201652370273681,0.38983152295901,0.192423683280659,0.116876902181569,3.62768613784338,160.273858336075,285.73863330118,327.878655759045,9.85266929564171,20.8327547750812,4.2124873581471,2.57242054894879,11.5361583928134,2.82375921308533,0.920650473014354,0,0.859265911718438,0,2.2661816921691,0,0.900642406448441,0.453142408984205,0.51776031175182,7.265114330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|short_description=p3@Cald1
}}

Revision as of 14:39, 5 August 2015

Short description:p3@Cald1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Cald1_5end
Coexpression cluster:MCL_coexpression_mm9:2529
Association with transcript: 0bp_to_ENSMUST00000031775_5end
EntrezGene:109624
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p3@Cald1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D823.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D920.68
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B329.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.94
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C314.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C47.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C198.53
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E130.37
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C530.42
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C614.57
Mouse Meningeal cells, donor3.CNhs12109.11639-122D110.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E82.31
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D93.94
Mouse Schwann, donor2.CNhs12573.11746-123F910.43
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G325.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F746.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C482.28
Mouse hepatocyte, donor3.CNhs12615.11637-122C8118.73
Mouse hepatocyte, donor6.CNhs13090.11822-124F4100.72
Mouse hepatocyte, donor8.CNhs13091.11824-124F652.42
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A724.16
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.95
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.38
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B622.61
accessory axillary lymph node, adult.CNhs10475.1063-29H919.16
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C56.07
adrenal gland, embryo E16.CNhs11004.1254-43D67.92
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F56.03
adrenal gland, neonate N00.CNhs11191.1311-23C19.76
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A820.02
aorta, adult.CNhs10498.46-23H15.06
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F59.38
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C32.91
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G433.67
eyeball, embryo E12.CNhs11016.345-16C612.36
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C98.10
eyeball, embryo E17.CNhs11023.1261-18D47.08
eyeball, neonate N00.CNhs11207.633-15C67.42
eyeball, neonate N01.CNhs11140.1532-43E79.99
eyeball, neonate N02.CNhs11205.1551-44G86.09
eyeball, neonate N16.CNhs11188.777-19A216.30
forelimb, embryo E11.CNhs10596.335-25E28.41
forelimb, embryo E12.CNhs10600.359-14H29.83
forelimb, embryo E13.CNhs10589.384-1E29.33
forelimb, embryo E14.CNhs10577.413-26A86.14
forelimb, embryo E15.CNhs11007.437-20E76.95
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B54.12
gonad, embryo E13.CNhs11044.1564-45I69.35
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E918.43
heart, embryo E12.CNhs11015.353-12F516.65
heart, embryo E13.CNhs11013.376-3I916.03
heart, embryo E14.CNhs10597.403-26D413.73
heart, embryo E15.CNhs11017.431-16C815.35
heart, embryo E16.CNhs11021.457-17C611.42
heart, embryo E17.CNhs11025.479-18E511.16
heart, embryo E18.CNhs11030.1283-20G39.39
heart, neonate N00.CNhs11213.639-21E312.61
heart, neonate N03.CNhs11221.1349-25I26.75
heart, neonate N10.CNhs11118.749-24G15.75
heart, neonate N16.CNhs11209.782-15G14.13
heart, neonate N20.CNhs11127.821-26I63.36
heart, neonate N25.CNhs11196.1351-25D34.83
heart, neonate N30.CNhs11202.1390-42D25.91
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.75
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I57.25
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D86.31
intestine, embryo E16.CNhs10585.463-22H44.64
intestine, embryo E17.CNhs10582.482-18D36.45
intestine, embryo E18.CNhs10526.1289-20F73.80
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B87.04
intestine, neonate N07.CNhs11095.720-20F27.76
intestine, neonate N10.CNhs11098.755-23A55.65
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E35.19
intestine, neonate N30.CNhs11131.1384-42G13.19
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F87.20
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I24.68
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G76.59
kidney, neonate N10.CNhs11206.758-6D54.74
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F32.51
kidney, neonate N30.CNhs11203.1385-42H12.71
liver, adult pregnant day01.CNhs10466.508-5B271.74
liver, embryo E12.CNhs10601.355-15F89.84
liver, embryo E13.CNhs10524.378-3H613.96
liver, embryo E14.CNhs10594.409-16E112.59
liver, embryo E15.CNhs10520.433-16D717.24
liver, embryo E16.CNhs10523.462-17F518.57
liver, embryo E17.CNhs10510.481-18A321.39
liver, embryo E18.CNhs10579.499-43G427.91
liver, neonate N00.CNhs11117.641-24F442.32
liver, neonate N03.CNhs11123.1345-25G270.84
liver, neonate N06.CNhs11101.684-20A8175.40
liver, neonate N07.CNhs11103.716-20H298.62
liver, neonate N10.CNhs11115.751-24B984.25
liver, neonate N20.CNhs11220.823-25A394.72
liver, neonate N25.CNhs11198.1368-26H196.34
liver, neonate N30.CNhs11106.1382-42D186.36
lung, adult.CNhs10474.28-22B16.10
lung, embryo E12.CNhs10522.354-16G27.58
lung, embryo E14.CNhs10604.404-26F89.78
lung, embryo E15.CNhs11020.432-17C59.34
lung, embryo E16.CNhs10998.458-17B67.28
lung, embryo E17.CNhs10605.480-44A66.70
lung, embryo E18.CNhs10583.1287-20I611.19
lung, neonate N00.CNhs11224.640-42C617.37
lung, neonate N06.CNhs11212.683-20E521.28
lung, neonate N07.CNhs11111.715-19A324.36
lung, neonate N10.CNhs11219.750-23E616.74
lung, neonate N20.CNhs11109.822-18A45.41
lung, neonate N25.CNhs11119.1359-25C77.08
lung, neonate N30.CNhs11133.1394-42H28.53
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H22.76
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C723.77
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E117.35
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E216.40
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E316.16
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D712.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D813.59
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.04
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.95
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D519.87
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.18
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G64.12
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F43.88
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E56.22
pancreas, embryo E17.CNhs10599.1558-45G37.97
pancreas, embryo E18.CNhs10580.1535-43I78.61
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D84.63
pancreas, neonate N16.CNhs11136.787-43B65.37
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G83.06
pituitary gland, embryo E12.CNhs11018.346-16E65.40
pituitary gland, embryo E13.CNhs11009.370-44C73.62
pituitary gland, embryo E14.CNhs11037.398-44A57.07
pituitary gland, embryo E15.CNhs10592.427-16B97.45
pituitary gland, embryo E16.CNhs11036.449-43F69.10
pituitary gland, embryo E17.CNhs11039.1265-44F57.57
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I7141.04
placenta, adult pregnant day17.CNhs10464.577-18G392.36
prostate, adult.CNhs10470.859-1F83.97
skin, adult.CNhs10492.30-1C332.98
skin, neonate N00.CNhs11124.650-25G45.81
skin, neonate N03.CNhs11215.662-22H39.47
skin, neonate N06.CNhs11097.693-20I518.86
skin, neonate N10.CNhs11108.762-6C452.85
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C14.33
spleen, embryo E18.CNhs11011.1271-21F22.59
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E35.38
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D41.84
stomach, embryo E17.CNhs11006.1035-18D51.46
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B86.74
stomach, neonate N07.CNhs11210.718-18A912.89
stomach, neonate N25.CNhs11104.1355-25E43.40
stomach, neonate N30.CNhs11134.1386-42I13.76
submandibular gland, adult.CNhs10469.59-29C122.99
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F58.52
testis, embryo E15.CNhs11034.443-27C53.97
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I52.84
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B72.93
testis, neonate N07.CNhs11222.726-26I43.65
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I43.04
thymus, embryo E15.CNhs11005.430-45I23.39
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C12.69
thymus, embryo E18.CNhs10595.1273-19G41.59
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H3160.27
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7285.74
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G5327.88
urinary bladder, adult.CNhs10481.879-12E49.85
uterus, adult pregnant day19.CNhs10497.590-15F520.83
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D52.57
vesicular gland, adult.CNhs10491.51-27F811.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I87.27
whole body, embryo E12.CNhs10587.857-27C910.37
whole body, embryo E13.CNhs10512.372-23H27.34
whole body, embryo E14.5.CNhs10578.420-27D29.72
whole body, embryo E14.CNhs10519.395-14B110.90
whole body, embryo E16.CNhs10514.453-14F29.93
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.02
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.08
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G58.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.92
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.94
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.39
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.47
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G511.48
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.06
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G57.74
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.10
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.96
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.97
whole body, embryo E17.5.CNhs10513.490-9F98.29
whole body, embryo E17.CNhs10517.475-3I53.25
whole body, embryo E18.CNhs10516.493-3B35.61
whole body, neonate N00.CNhs10525.657-19C29.67
whole body, neonate N01.CNhs10576.659-23C68.23
whole body, neonate N06.CNhs10515.692-21D16.18
whole body, neonate N10.CNhs10518.761-6B45.10





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial tube1.62e-1647
liver1.34e-1322
epithelial sac1.34e-1322
digestive gland1.34e-1322
epithelium of foregut-midgut junction1.34e-1322
anatomical boundary1.34e-1322
hepatobiliary system1.34e-1322
foregut-midgut junction1.34e-1322
hepatic diverticulum1.34e-1322
liver primordium1.34e-1322
septum transversum1.34e-1322
liver bud1.34e-1322
exocrine gland6.63e-1325
exocrine system6.63e-1325
digestive tract diverticulum2.89e-1223
sac2.89e-1223
trunk mesenchyme1.00e-1045
trunk1.10e-0890
trunk region element7.19e-0879
subdivision of trunk1.41e-0766
mesenchyme4.13e-0761
entire embryonic mesenchyme4.13e-0761
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