FFCP PHASE1:Mm9::chr11:120924857..120924888,-: Difference between revisions
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{{FFCP|EntrezGene=58210|HGNC=|MCL_coexpression_id=12|UniProt=Q9D966,Q8CE38,Q8VDU7|association_with_transcript=0bp_to_ENSMUST00000039309,ENSMUST00000081499,NM_026907,uc007mvd.1,uc011yjj.1_5end|description=CAGE_peak_1_at_Sectm1b_5end|id=chr11:120924857..120924888,-|ontology_enrichment_celltype=CL:0002563!1.09e-07!9;CL:0002251!1.09e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.54e-11,9;CL:0002251,1.54e-11,9;CL:0000239,1.07e-08,6;CL:0000677,1.07e-08,6;CL:0000584,1.07e-08,6;CL:0000075,2.72e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.56e-16!59;UBERON:0000160!1.05e-14!43;UBERON:0000344!2.18e-12!15;UBERON:0001242!6.26e-11!13;UBERON:0000060!6.26e-11!13;UBERON:0001262!6.26e-11!13;UBERON:0004786!6.26e-11!13;UBERON:0004923!7.44e-08!24;UBERON:0003350!1.09e-07!9;UBERON:0004808!1.09e-07!9;UBERON:0001277!1.09e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.52e-32,31;UBERON:0005409,2.23e-30,47;UBERON:0000344,3.47e-19,15;UBERON:0001242,8.22e-17,13;UBERON:0001262,8.22e-17,13;UBERON:0004786,8.22e-17,13;UBERON:0004923,1.18e-11,24;UBERON:0003350,1.54e-11,9;UBERON:0004808,1.54e-11,9;UBERON:0001277,1.54e-11,9;UBERON:0000485,4.93e-09,11;UBERON:0001007,1.21e-08,116;UBERON:0001555,1.21e-08,116;UBERON:0007026,1.21e-08,116;UBERON:0004119,2.57e-08,118;UBERON:0000925,2.57e-08,118;UBERON:0006595,2.57e-08,118;UBERON:0004921,1.63e-07,114;UBERON:0007023,7.42e-07,51|phase1_expression=0,123.188318896694,87.3598539627909,390.178832585811,273.489068550706,12.0873075776561,25.2301651843168,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73893940374735,0,0,86.0759234628528,71.8051049740242,87.2832585454831,64.6142994238612,49.7738547504404,328.170445401158,191.290868487787,41.9070665138526,0,0,0,15.8868390863201,13.1325369833209,13.6793468695787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0.579728977403356,0,0.679971333707751,0,0,0,18.8195522976547,0,0,0,0,0,0,0,0,0,0,55.150813904306,0,0,0,0,0,0,0.117588707135705,1.13099932196708,3.21353458054686,0,0,0,0,0,415.653627516412,0,0,371.945472383709,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.870848794270651,2.0217820674694,1.47309299120532,0,0,0,0,0.340182495756639,0,0.281105173679186,0.776110112217047,0,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,1106.24208542976,237.212158297199,0,0,0.515469845288373,1.4117846723634,6.0042071838115,25.1097826468578,241.060763264612,124.347710816628,134.967007125745,186.024301358476,138.619465941694,267.848183778958,275.143737490486,295.92393205599,0,0,0,0.203651327845314,0.193952487167626,0.561086559122548,3.35153646758564,12.1040321343274,10.6759134932135,23.9390498008293,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,5.90117127622843,14.6246475541508,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,5.67760340833074,0.178065603667255,0.488660878060728,0.989820737835213,0,0,0.302323556964751,0.188605079755898,0,0,21.1911200397941,0,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0,0.304464949114599,0,0.63549621259146,0.220528398054962,4.78170133530292,0.322928853391811,0.180938774784468,0.358117032009409,2.1338316966858,234.93355432366,0,0,0,0.185194527369712,0,0,0,0,0,0,117.424486015859,0,0.203319467126849,0.756037385752609,4.39085421630384,16.1588297172171,32.2325787859722,34.3838375817397,44.498510137285,339.720844997789,1.86401793926078,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0.295379054349154,0.201932899896295,0,0.100826185136841,0.292373642219257,0.0962118416403295,0.233753804363138,0.453460767230423,0,0,0,0,2.81523713176773,4.57879060668163,3.85863082342319,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,1.33348036680969,1.23621034343337,0.962757628775446,0.505394423527595,1.52087579934144,0.565879024158229,0.468207537349412,0.832326981263301,0.918967503289812,1.90517476513229,0.347652977834566,0.38581844092741,0.824171801606613,0.735994600671987,0.342869252385415,1.24233064311536,1.66905332963125,0.872078499793971,0.941093804153306,0.507687647350059,0.182927972872773,1.05227884575137,0.950628796921032,1.12228454331548,1.06771516311757,0.591026894253381,0,0.619747364743864,0.578719832943424,0.249810577937946,2.10538447600868,4.94203424311086,0.191288332068843,0.220591419119515,0|short_description=p1@Sectm1b}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:58210 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D966,uniprot:Q8CE38,uniprot:Q8VDU7 | |||
|association_with_transcript=0bp_to_ENSMUST00000039309,ENSMUST00000081499,NM_026907,uc007mvd.1,uc011yjj.1_5end | |||
|cluster_id=chr11:120924857..120924888,- | |||
|description=CAGE_peak_1_at_Sectm1b_5end | |||
|id=chr11:120924857..120924888,- | |||
|ontology_enrichment_celltype=CL:0002563!1.09e-07!9;CL:0002251!1.09e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.54e-11,9;CL:0002251,1.54e-11,9;CL:0000239,1.07e-08,6;CL:0000677,1.07e-08,6;CL:0000584,1.07e-08,6;CL:0000075,2.72e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.56e-16!59;UBERON:0000160!1.05e-14!43;UBERON:0000344!2.18e-12!15;UBERON:0001242!6.26e-11!13;UBERON:0000060!6.26e-11!13;UBERON:0001262!6.26e-11!13;UBERON:0004786!6.26e-11!13;UBERON:0004923!7.44e-08!24;UBERON:0003350!1.09e-07!9;UBERON:0004808!1.09e-07!9;UBERON:0001277!1.09e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.52e-32,31;UBERON:0005409,2.23e-30,47;UBERON:0000344,3.47e-19,15;UBERON:0001242,8.22e-17,13;UBERON:0001262,8.22e-17,13;UBERON:0004786,8.22e-17,13;UBERON:0004923,1.18e-11,24;UBERON:0003350,1.54e-11,9;UBERON:0004808,1.54e-11,9;UBERON:0001277,1.54e-11,9;UBERON:0000485,4.93e-09,11;UBERON:0001007,1.21e-08,116;UBERON:0001555,1.21e-08,116;UBERON:0007026,1.21e-08,116;UBERON:0004119,2.57e-08,118;UBERON:0000925,2.57e-08,118;UBERON:0006595,2.57e-08,118;UBERON:0004921,1.63e-07,114;UBERON:0007023,7.42e-07,51 | |||
|phase1_expression=0,123.188318896694,87.3598539627909,390.178832585811,273.489068550706,12.0873075776561,25.2301651843168,0,0,0,0,0,0,0,0,0,0,0,0,0,7.73893940374735,0,0,86.0759234628528,71.8051049740242,87.2832585454831,64.6142994238612,49.7738547504404,328.170445401158,191.290868487787,41.9070665138526,0,0,0,15.8868390863201,13.1325369833209,13.6793468695787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151143120213571,0.579728977403356,0,0.679971333707751,0,0,0,18.8195522976547,0,0,0,0,0,0,0,0,0,0,55.150813904306,0,0,0,0,0,0,0.117588707135705,1.13099932196708,3.21353458054686,0,0,0,0,0,415.653627516412,0,0,371.945472383709,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.870848794270651,2.0217820674694,1.47309299120532,0,0,0,0,0.340182495756639,0,0.281105173679186,0.776110112217047,0,0,0.175951124163949,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0,0,0,0,0,0,1106.24208542976,237.212158297199,0,0,0.515469845288373,1.4117846723634,6.0042071838115,25.1097826468578,241.060763264612,124.347710816628,134.967007125745,186.024301358476,138.619465941694,267.848183778958,275.143737490486,295.92393205599,0,0,0,0.203651327845314,0.193952487167626,0.561086559122548,3.35153646758564,12.1040321343274,10.6759134932135,23.9390498008293,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0.238043640886014,0.195133647857799,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,5.90117127622843,14.6246475541508,0,0,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,5.67760340833074,0.178065603667255,0.488660878060728,0.989820737835213,0,0,0.302323556964751,0.188605079755898,0,0,21.1911200397941,0,0,0.316036757935816,0,0,0,0,0,0,0.177340233642274,0,0,0.304464949114599,0,0.63549621259146,0.220528398054962,4.78170133530292,0.322928853391811,0.180938774784468,0.358117032009409,2.1338316966858,234.93355432366,0,0,0,0.185194527369712,0,0,0,0,0,0,117.424486015859,0,0.203319467126849,0.756037385752609,4.39085421630384,16.1588297172171,32.2325787859722,34.3838375817397,44.498510137285,339.720844997789,1.86401793926078,0,0,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0.120195449519969,0.295379054349154,0.201932899896295,0,0.100826185136841,0.292373642219257,0.0962118416403295,0.233753804363138,0.453460767230423,0,0,0,0,2.81523713176773,4.57879060668163,3.85863082342319,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,1.33348036680969,1.23621034343337,0.962757628775446,0.505394423527595,1.52087579934144,0.565879024158229,0.468207537349412,0.832326981263301,0.918967503289812,1.90517476513229,0.347652977834566,0.38581844092741,0.824171801606613,0.735994600671987,0.342869252385415,1.24233064311536,1.66905332963125,0.872078499793971,0.941093804153306,0.507687647350059,0.182927972872773,1.05227884575137,0.950628796921032,1.12228454331548,1.06771516311757,0.591026894253381,0,0.619747364743864,0.578719832943424,0.249810577937946,2.10538447600868,4.94203424311086,0.191288332068843,0.220591419119515,0 | |||
|short_description=p1@Sectm1b | |||
}} |
Revision as of 15:53, 5 August 2015
Short description: | p1@Sectm1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sectm1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000039309, ENSMUST00000081499, NM_026907, uc007mvd.1, uc011yjj.1_5end |
EntrezGene: | 58210 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.54e-11 | 9 |
epithelial cell of alimentary canal | 1.54e-11 | 9 |
brush border epithelial cell | 1.07e-08 | 6 |
gut absorptive cell | 1.07e-08 | 6 |
enterocyte | 1.07e-08 | 6 |
columnar/cuboidal epithelial cell | 2.72e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.52e-32 | 31 |
gastrointestinal system | 2.23e-30 | 47 |
mucosa | 3.47e-19 | 15 |
intestinal mucosa | 8.22e-17 | 13 |
wall of intestine | 8.22e-17 | 13 |
gastrointestinal system mucosa | 8.22e-17 | 13 |
organ component layer | 1.18e-11 | 24 |
epithelium of mucosa | 1.54e-11 | 9 |
gastrointestinal system epithelium | 1.54e-11 | 9 |
intestinal epithelium | 1.54e-11 | 9 |
simple columnar epithelium | 4.93e-09 | 11 |
digestive system | 1.21e-08 | 116 |
digestive tract | 1.21e-08 | 116 |
primitive gut | 1.21e-08 | 116 |
endoderm-derived structure | 2.57e-08 | 118 |
endoderm | 2.57e-08 | 118 |
presumptive endoderm | 2.57e-08 | 118 |
subdivision of digestive tract | 1.63e-07 | 114 |
adult organism | 7.42e-07 | 51 |