FFCP PHASE1:Mm9::chr4:8166181..8166194,-: Difference between revisions
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{{FFCP|EntrezGene=12319|HGNC=|MCL_coexpression_id=30|UniProt=P28651,A2AKP8|association_with_transcript=0bp_to_ENSMUST00000066674,NM_007592,uc008rxv.1_5end|description=CAGE_peak_1_at_Car8_5end|id=chr4:8166181..8166194,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001007!4.54e-12!128;UBERON:0001555!4.54e-12!128;UBERON:0007026!4.54e-12!128;UBERON:0004119!1.88e-11!130;UBERON:0000925!1.88e-11!130;UBERON:0006595!1.88e-11!130;UBERON:0004921!2.91e-11!126;UBERON:0004185!2.91e-11!126;UBERON:0000481!7.25e-11!230;UBERON:0000160!2.46e-10!43;UBERON:0005177!1.32e-09!85;UBERON:0005409!1.43e-09!59;UBERON:0009854!7.77e-09!23;UBERON:0009856!7.77e-09!23;UBERON:0002107!1.97e-08!22;UBERON:0007499!1.97e-08!22;UBERON:0006925!1.97e-08!22;UBERON:0009497!1.97e-08!22;UBERON:0000015!1.97e-08!22;UBERON:0002423!1.97e-08!22;UBERON:0006235!1.97e-08!22;UBERON:0008835!1.97e-08!22;UBERON:0003894!1.97e-08!22;UBERON:0004161!1.97e-08!22;UBERON:0008836!1.97e-08!22;UBERON:0009569!4.03e-08!66;UBERON:0002365!7.03e-08!25;UBERON:0002330!7.03e-08!25;UBERON:0000025!1.46e-07!114;UBERON:0000468!3.75e-07!333;UBERON:0004111!8.78e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001007,2.81e-10,116;UBERON:0001555,2.81e-10,116;UBERON:0007026,2.81e-10,116;UBERON:0000160,9.54e-10,31;UBERON:0004119,1.35e-09,118;UBERON:0000925,1.35e-09,118;UBERON:0006595,1.35e-09,118;UBERON:0004921,1.59e-09,114;UBERON:0005177,4.25e-09,79;UBERON:0009854,6.64e-09,23;UBERON:0009856,6.64e-09,23;UBERON:0002107,1.70e-08,22;UBERON:0007499,1.70e-08,22;UBERON:0006925,1.70e-08,22;UBERON:0009497,1.70e-08,22;UBERON:0000015,1.70e-08,22;UBERON:0002423,1.70e-08,22;UBERON:0006235,1.70e-08,22;UBERON:0008835,1.70e-08,22;UBERON:0003894,1.70e-08,22;UBERON:0004161,1.70e-08,22;UBERON:0008836,1.70e-08,22;UBERON:0005409,2.47e-08,47;UBERON:0009569,5.18e-08,66;UBERON:0002365,6.13e-08,25;UBERON:0002330,6.13e-08,25;UBERON:0000025,2.53e-07,114|phase1_expression=1.60148847104794,36.2934423944936,29.5749505603198,0.60492842261366,1.50268718983904,31.8970616632591,33.4066076051602,0.129123323441576,0.140788722151667,0.234064526321993,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,51.3661472512461,0,0,50.0776283343363,41.2936705920906,21.2465826722557,23.26114779259,18.0995835456147,33.0640749854091,21.4225610295941,21.7295900442199,0,0,0,19.9307617628379,22.4416771233965,24.908661464009,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.659058548203415,0,1.25987779462826,1.43752564364972,0,0,0,2.57259436035947,2.0057340795713,0,8.29497489524351,20.6306481916093,5.07065122804943,0.338844532069132,0,0.449949858640699,0,0,2.69640099466564,2.68952813725088,0.933206510776299,0.405017814995072,0.630974884054146,17.9960120174396,15.2399293256613,0.734944795289724,1.72521847832825,0.919218786610021,7.70811166995721,6.89511625660014,11.0596703944495,6.06676923558892,7.13603620098795,5.2091337055676,64.7704557683204,10.1297269805702,10.2374826010463,20.0347438122094,21.2133804390663,2.79599168737951,0.075726193333184,0.151143120213571,164.353165093851,99.8091697298408,82.2765313786378,199.150477714355,122.157966480162,103.046184032387,60.3911006566533,0,0,0,8.73229202615419,0,0,0,32.0406740696597,28.1229450677359,24.7706978057244,61.8876628077305,0.258937883647172,4.75014845007439,2.60227990149204,7.61163695780353,6.45723392316964,8.28974523039424,15.4041206347773,23.1226528046603,9.39340877390621,9.39895819979426,0.884610551949874,5.01477234836968,8.83366073841574,8.24287930329878,35.4144346314432,1208.01356846964,1160.75364916017,27.0784478521107,0.11981512450592,0.599902730993408,0,8.08869452786043,10.5225138648284,10.0523481690292,9.90798625095976,13.2972037811772,8.93488591606108,8.11206315338788,1.73126918545538,4.85187185379363,0.252722758433675,14.9413717679397,5.07469727554544,5.0578462975364,3.06105620669094,4.9732589885786,7.55205140579739,7.43059577652129,7.30873451565885,27.6812606690747,3.44908788692548,1.89106080167819,3.16712023495108,3.06874025398605,2.50242524303038,5.2237824978325,2.46938563689532,2.58744546864041,0,0.257347907114715,0,8.28503090142008,8.91199027928165,15.8454614085693,17.992599904476,18.6926020160034,19.4376562238097,23.2533944750408,23.6080593231665,19.0327508058486,23.6966183875412,36.7735119537173,34.4542440569887,34.6493970198038,36.8844193688965,39.1882742780286,3.57492912559016,5.55684906848136,20.4859645449955,14.8092317331585,5.97207101498655,19.2756437644164,39.5623106258827,68.1690313226898,75.8309129511008,115.086503798098,25.1500402618591,70.4911526218767,96.5127201793035,91.3210206668882,71.5518199727171,31.4586793028978,33.5013977305776,38.6334070113472,9.10405924574792,7.88314737007129,14.6520056375005,14.255592949172,15.3222464862424,11.9230893813542,12.9002535733485,14.0229640580622,12.55989822731,16.4118228015995,165.420565914629,2.8363667971736,4.12773889737726,3.82265591054251,8.31726497692862,20.258881419203,33.6106124351474,28.4819176076303,11.998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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12319 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P28651,uniprot:A2AKP8 | |||
|association_with_transcript=0bp_to_ENSMUST00000066674,NM_007592,uc008rxv.1_5end | |||
|cluster_id=chr4:8166181..8166194,- | |||
|description=CAGE_peak_1_at_Car8_5end | |||
|id=chr4:8166181..8166194,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!4.54e-12!128;UBERON:0001555!4.54e-12!128;UBERON:0007026!4.54e-12!128;UBERON:0004119!1.88e-11!130;UBERON:0000925!1.88e-11!130;UBERON:0006595!1.88e-11!130;UBERON:0004921!2.91e-11!126;UBERON:0004185!2.91e-11!126;UBERON:0000481!7.25e-11!230;UBERON:0000160!2.46e-10!43;UBERON:0005177!1.32e-09!85;UBERON:0005409!1.43e-09!59;UBERON:0009854!7.77e-09!23;UBERON:0009856!7.77e-09!23;UBERON:0002107!1.97e-08!22;UBERON:0007499!1.97e-08!22;UBERON:0006925!1.97e-08!22;UBERON:0009497!1.97e-08!22;UBERON:0000015!1.97e-08!22;UBERON:0002423!1.97e-08!22;UBERON:0006235!1.97e-08!22;UBERON:0008835!1.97e-08!22;UBERON:0003894!1.97e-08!22;UBERON:0004161!1.97e-08!22;UBERON:0008836!1.97e-08!22;UBERON:0009569!4.03e-08!66;UBERON:0002365!7.03e-08!25;UBERON:0002330!7.03e-08!25;UBERON:0000025!1.46e-07!114;UBERON:0000468!3.75e-07!333;UBERON:0004111!8.78e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,2.81e-10,116;UBERON:0001555,2.81e-10,116;UBERON:0007026,2.81e-10,116;UBERON:0000160,9.54e-10,31;UBERON:0004119,1.35e-09,118;UBERON:0000925,1.35e-09,118;UBERON:0006595,1.35e-09,118;UBERON:0004921,1.59e-09,114;UBERON:0005177,4.25e-09,79;UBERON:0009854,6.64e-09,23;UBERON:0009856,6.64e-09,23;UBERON:0002107,1.70e-08,22;UBERON:0007499,1.70e-08,22;UBERON:0006925,1.70e-08,22;UBERON:0009497,1.70e-08,22;UBERON:0000015,1.70e-08,22;UBERON:0002423,1.70e-08,22;UBERON:0006235,1.70e-08,22;UBERON:0008835,1.70e-08,22;UBERON:0003894,1.70e-08,22;UBERON:0004161,1.70e-08,22;UBERON:0008836,1.70e-08,22;UBERON:0005409,2.47e-08,47;UBERON:0009569,5.18e-08,66;UBERON:0002365,6.13e-08,25;UBERON:0002330,6.13e-08,25;UBERON:0000025,2.53e-07,114 | |||
|phase1_expression=1.60148847104794,36.2934423944936,29.5749505603198,0.60492842261366,1.50268718983904,31.8970616632591,33.4066076051602,0.129123323441576,0.140788722151667,0.234064526321993,0,0.0797721589953364,0,0,0,0.202475267389826,0,0,0,0,51.3661472512461,0,0,50.0776283343363,41.2936705920906,21.2465826722557,23.26114779259,18.0995835456147,33.0640749854091,21.4225610295941,21.7295900442199,0,0,0,19.9307617628379,22.4416771233965,24.908661464009,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0.659058548203415,0,1.25987779462826,1.43752564364972,0,0,0,2.57259436035947,2.0057340795713,0,8.29497489524351,20.6306481916093,5.07065122804943,0.338844532069132,0,0.449949858640699,0,0,2.69640099466564,2.68952813725088,0.933206510776299,0.405017814995072,0.630974884054146,17.9960120174396,15.2399293256613,0.734944795289724,1.72521847832825,0.919218786610021,7.70811166995721,6.89511625660014,11.0596703944495,6.06676923558892,7.13603620098795,5.2091337055676,64.7704557683204,10.1297269805702,10.2374826010463,20.0347438122094,21.2133804390663,2.79599168737951,0.075726193333184,0.151143120213571,164.353165093851,99.8091697298408,82.2765313786378,199.150477714355,122.157966480162,103.046184032387,60.3911006566533,0,0,0,8.73229202615419,0,0,0,32.0406740696597,28.1229450677359,24.7706978057244,61.8876628077305,0.258937883647172,4.75014845007439,2.60227990149204,7.61163695780353,6.45723392316964,8.28974523039424,15.4041206347773,23.1226528046603,9.39340877390621,9.39895819979426,0.884610551949874,5.01477234836968,8.83366073841574,8.24287930329878,35.4144346314432,1208.01356846964,1160.75364916017,27.0784478521107,0.11981512450592,0.599902730993408,0,8.08869452786043,10.5225138648284,10.0523481690292,9.90798625095976,13.2972037811772,8.93488591606108,8.11206315338788,1.73126918545538,4.85187185379363,0.252722758433675,14.9413717679397,5.07469727554544,5.0578462975364,3.06105620669094,4.9732589885786,7.55205140579739,7.43059577652129,7.30873451565885,27.6812606690747,3.44908788692548,1.89106080167819,3.16712023495108,3.06874025398605,2.50242524303038,5.2237824978325,2.46938563689532,2.58744546864041,0,0.257347907114715,0,8.28503090142008,8.91199027928165,15.8454614085693,17.992599904476,18.6926020160034,19.4376562238097,23.2533944750408,23.6080593231665,19.0327508058486,23.6966183875412,36.7735119537173,34.4542440569887,34.6493970198038,36.8844193688965,39.1882742780286,3.57492912559016,5.55684906848136,20.4859645449955,14.8092317331585,5.97207101498655,19.2756437644164,39.5623106258827,68.1690313226898,75.8309129511008,115.086503798098,25.1500402618591,70.4911526218767,96.5127201793035,91.3210206668882,71.5518199727171,31.4586793028978,33.5013977305776,38.6334070113472,9.10405924574792,7.88314737007129,14.6520056375005,14.255592949172,15.3222464862424,11.9230893813542,12.9002535733485,14.0229640580622,12.55989822731,16.4118228015995,165.420565914629,2.8363667971736,4.12773889737726,3.82265591054251,8.31726497692862,20.258881419203,33.6106124351474,28.4819176076303,11.9980067813526,41.1842119782122,69.0087391331302,63.6361020513141,82.377945702244,142.959644918065,127.372163600558,192.01252150262,109.743394958963,3.22135400009824,9.94086356296358,10.863685489612,10.7957514212711,20.7707759227852,56.1782992490992,52.1006839780323,62.8964224983702,57.3593546190327,74.305922194389,98.1541255147271,115.69893785015,117.74433368535,0,0,3.93411418415229,2.75936746304733,8.34863067936518,9.96299336033727,0,12.6235463602186,3.47059041357882,2.34263246577983,4.52389135238878,2.62865677747807,2.89638276307112,3.96307143104365,1.21443210502468,1.46127928955656,1.58115111178609,5.14114106274891,1.70328102249922,2.49291845134157,3.74640006513225,2.96946221350564,49.1157011857862,5.09839335925461,8.46505959501303,8.29862350925952,2.95301892880773,8.60818414242997,30.2361103006819,31.2639007350655,27.8067955140083,12.009396801561,14.7586052004998,19.5957532171555,4.76615448055303,4.14140516272013,5.04498866752743,9.43082954139006,10.6404140185364,5.52943334566419,9.05019613311665,4.56697423671899,2.3467170806371,0.847328283455281,1.54369878638473,3.2977250588296,2.26050197374268,1.5078231232039,1.07435109602823,0.820704498725306,30.8969686827642,4.82105785227325,0.341741761595705,5.36605856704379,6.85219751267933,0.565105371014073,0,0.915112692826091,0.169978429993855,0.279902904647316,0.414599921413271,16.2294005062569,2.37251995185852,10.775931757723,17.8208812355972,21.3270061934758,72.9330962912233,44.9098273461453,40.5001933054146,17.275892170946,54.438288782553,37.9016980983025,0,2.54178128274764,2.15096037594227,1.36115831840833,1.29159823477731,2.02747350588934,1.87771581833206,2.73429208172295,1.57289016638566,0.241584120826006,0.864090018773596,0.316011120628178,5.27085559754427,2.67048488628551,1.81889152168913,1.25318686967237,1.39076948346885,0.600977247599844,0.590758108698309,1.9183625490148,1.143102099825,0.806609481094724,0.779663045918019,1.25075394132428,1.05189211963412,10.2028672626845,0,0.448569283047378,1.00730769818447,7.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| |||
|short_description=p1@Car8 | |||
}} |
Revision as of 18:13, 5 August 2015
Short description: | p1@Car8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Car8_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 0bp_to_ENSMUST00000066674, NM_007592, uc008rxv.1_5end |
EntrezGene: | 12319 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
digestive system | 2.81e-10 | 116 |
digestive tract | 2.81e-10 | 116 |
primitive gut | 2.81e-10 | 116 |
intestine | 9.54e-10 | 31 |
endoderm-derived structure | 1.35e-09 | 118 |
endoderm | 1.35e-09 | 118 |
presumptive endoderm | 1.35e-09 | 118 |
subdivision of digestive tract | 1.59e-09 | 114 |
trunk region element | 4.25e-09 | 79 |
digestive tract diverticulum | 6.64e-09 | 23 |
sac | 6.64e-09 | 23 |
liver | 1.70e-08 | 22 |
epithelial sac | 1.70e-08 | 22 |
digestive gland | 1.70e-08 | 22 |
epithelium of foregut-midgut junction | 1.70e-08 | 22 |
anatomical boundary | 1.70e-08 | 22 |
hepatobiliary system | 1.70e-08 | 22 |
foregut-midgut junction | 1.70e-08 | 22 |
hepatic diverticulum | 1.70e-08 | 22 |
liver primordium | 1.70e-08 | 22 |
septum transversum | 1.70e-08 | 22 |
liver bud | 1.70e-08 | 22 |
gastrointestinal system | 2.47e-08 | 47 |
subdivision of trunk | 5.18e-08 | 66 |
exocrine gland | 6.13e-08 | 25 |
exocrine system | 6.13e-08 | 25 |
tube | 2.53e-07 | 114 |