FFCP PHASE1:Mm9::chr15:84155155..84155207,+: Difference between revisions
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{{FFCP|EntrezGene=64099|HGNC=|MCL_coexpression_id=36|UniProt=F2Z401,F2Z489|association_with_transcript=0bp_to_ENSMUST00000139235,ENSMUST00000151072_5end|description=CAGE_peak_1_at_Parvg_5end|id=chr15:84155155..84155207,+|ontology_enrichment_celltype=CL:0000988!1.61e-10!32;CL:0002032!1.61e-10!32;CL:0000037!1.61e-10!32;CL:0000566!1.61e-10!32;CL:0000837!1.61e-10!32;CL:0002031!3.27e-08!25;CL:0000738!4.37e-08!17;CL:0002087!4.37e-08!17;CL:0000838!1.31e-07!12;CL:0000084!3.64e-07!11;CL:0000827!3.64e-07!11|ontology_enrichment_celltype_v019_2=CL:0000988,2.07e-12,32;CL:0002032,2.07e-12,32;CL:0000037,2.07e-12,32;CL:0000837,2.07e-12,32;CL:0002031,6.73e-10,25;CL:0000738,9.26e-09,17;CL:0002087,9.26e-09,17;CL:0000838,2.51e-08,12;CL:0000084,7.88e-08,11;CL:0000827,7.88e-08,11;CL:0002320,1.89e-07,46;CL:0000134,1.89e-07,46;CL:0000542,3.25e-07,13;CL:0000051,3.25e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!4.90e-20!48;UBERON:0002390!8.09e-19!45;UBERON:0003061!8.09e-19!45;UBERON:0002405!2.63e-18!70;UBERON:0004177!8.05e-11!29;UBERON:0005057!1.26e-09!51;UBERON:0003081!1.27e-09!88;UBERON:0002371!6.59e-09!16;UBERON:0002370!2.40e-08!23;UBERON:0000974!2.40e-08!23;UBERON:0004807!2.40e-08!23;UBERON:0005058!2.40e-08!23;UBERON:0003351!2.40e-08!23;UBERON:0009113!2.40e-08!23;UBERON:0003295!2.40e-08!23;UBERON:0009722!2.40e-08!23;UBERON:0005562!2.40e-08!23;UBERON:0007690!2.40e-08!23;UBERON:0001474!2.60e-08!22;UBERON:0004765!2.60e-08!22;UBERON:0001434!2.60e-08!22;UBERON:0003408!3.23e-08!24;UBERON:0006562!1.32e-07!24;UBERON:0001557!1.32e-07!24;UBERON:0001042!1.32e-07!24;UBERON:0008814!1.32e-07!24;UBERON:0009145!1.32e-07!24;UBERON:0002204!5.26e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.58e-23,48;UBERON:0002405,2.58e-23,48;UBERON:0002390,6.03e-22,45;UBERON:0003061,6.03e-22,45;UBERON:0004177,6.78e-13,29;UBERON:0005057,6.78e-13,29;UBERON:0003081,2.80e-10,87;UBERON:0002370,4.28e-10,23;UBERON:0000974,4.28e-10,23;UBERON:0004807,4.28e-10,23;UBERON:0005058,4.28e-10,23;UBERON:0003351,4.28e-10,23;UBERON:0009113,4.28e-10,23;UBERON:0003295,4.28e-10,23;UBERON:0009722,4.28e-10,23;UBERON:0005562,4.28e-10,23;UBERON:0007690,4.28e-10,23;UBERON:0003408,6.36e-10,24;UBERON:0002371,8.94e-10,16;UBERON:0001474,2.04e-09,22;UBERON:0004765,2.04e-09,22;UBERON:0001434,2.04e-09,22;UBERON:0000077,2.74e-09,35;UBERON:0006562,3.06e-09,24;UBERON:0001557,3.06e-09,24;UBERON:0001042,3.06e-09,24;UBERON:0008814,3.06e-09,24;UBERON:0009145,3.06e-09,24;UBERON:0002204,1.72e-08,32;UBERON:0001041,6.19e-08,80;UBERON:0002384,1.89e-07,46;UBERON:0000065,2.07e-07,41;UBERON:0001004,2.17e-07,42;UBERON:0000072,4.00e-07,27|phase1_expression=0.320297694209588,0,0,0,0,0,0,49.5833562015653,10.2775767170717,11.9372908424217,65.4052638621429,56.0000556147262,48.9634087603248,52.0151394393035,11.6588416635482,19.0326751346436,12.5921138063066,50.7894086226763,44.6993053554708,40.7414065726109,3.31668831589172,58.5816612085223,63.4715487607613,8.31960598525715,8.02932483735095,0,0,0,0.570070258369122,0.756090389279792,1.10865255327652,0,0,0,0,0,0,180.805664478344,98.4482534099989,177.474549207118,164.116585160653,165.297007359944,188.378016976088,0,0,0,0.782391344348039,0,0,0,0,0,35.7376950902978,32.6412963905105,23.8626597391149,0.514518872071894,2.0057340795713,1.03134418455488,0.404632921719196,2.11596391708813,0.633831403506179,0,0,64.7927796442607,55.3765163037506,64.6536904600951,22.4700082888804,15.3687322128622,0.207379224616955,0.810035629990144,0.210324961351382,0,1.10434270475807,0.734944795289724,1.0543001812006,0.919218786610021,1.10115880999389,2.55374676170375,1.53606533256243,0.659431438650969,0.914876436024097,0,1.95428099300967,1.12552522006336,0.763991238884051,1.17851434189467,0.569486723196412,0.931997229126503,1.06016670666458,0.151143120213571,0,0.860423876981386,0,0,0.649776417447669,0,7.16266542671934,0,0,0,0,0,0,0,0,0,0,3.65388415100992,38.3228067797814,3.41416919849097,1.04091196059682,0.913396434936424,2.07553947530453,0.904335843315735,0.823120949949934,0.628332956648377,0.247194967734374,1.44599356919912,45.1151381494436,3.23533699894818,14.575540218386,13.5765070877862,0,0.878342391034642,0.41889341362691,2.29911349687732,38.4606549664004,29.395233818677,44.3475092484996,1.19832511523858,1.83000241127451,0.376963056338593,2.60736480288415,1.53429274398198,1.0389402227978,1.29793010454206,1.62942982160506,13.1871388846699,1.51633655060205,0.210441855886474,0.390361328888111,0.229902104433473,0,0.452114453507145,0.476255494059295,0,0.374806898238915,0,0.215567992932842,0.189106080167819,0.527853372491847,0.876782929710299,1.66828349535359,1.39300866608867,1.23469281844766,0.398068533636986,47.7504967373,47.3520149091076,45.1819964038992,0.414251545071004,0.469052119962192,0.180062061461015,0,1.57411385397923,0.308534225774757,0.465067889500816,0,0.700592054203017,0.987359099480883,0.492502392237286,0.891756905004413,1.02339991197733,1.09775057645525,0.939444931322602,3.78521907415429,0.514523061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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:64099 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:F2Z401,uniprot:F2Z489 | |||
|association_with_transcript=0bp_to_ENSMUST00000139235,ENSMUST00000151072_5end | |||
|cluster_id=chr15:84155155..84155207,+ | |||
|description=CAGE_peak_1_at_Parvg_5end | |||
|id=chr15:84155155..84155207,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.61e-10!32;CL:0002032!1.61e-10!32;CL:0000037!1.61e-10!32;CL:0000566!1.61e-10!32;CL:0000837!1.61e-10!32;CL:0002031!3.27e-08!25;CL:0000738!4.37e-08!17;CL:0002087!4.37e-08!17;CL:0000838!1.31e-07!12;CL:0000084!3.64e-07!11;CL:0000827!3.64e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.07e-12,32;CL:0002032,2.07e-12,32;CL:0000037,2.07e-12,32;CL:0000837,2.07e-12,32;CL:0002031,6.73e-10,25;CL:0000738,9.26e-09,17;CL:0002087,9.26e-09,17;CL:0000838,2.51e-08,12;CL:0000084,7.88e-08,11;CL:0000827,7.88e-08,11;CL:0002320,1.89e-07,46;CL:0000134,1.89e-07,46;CL:0000542,3.25e-07,13;CL:0000051,3.25e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.90e-20!48;UBERON:0002390!8.09e-19!45;UBERON:0003061!8.09e-19!45;UBERON:0002405!2.63e-18!70;UBERON:0004177!8.05e-11!29;UBERON:0005057!1.26e-09!51;UBERON:0003081!1.27e-09!88;UBERON:0002371!6.59e-09!16;UBERON:0002370!2.40e-08!23;UBERON:0000974!2.40e-08!23;UBERON:0004807!2.40e-08!23;UBERON:0005058!2.40e-08!23;UBERON:0003351!2.40e-08!23;UBERON:0009113!2.40e-08!23;UBERON:0003295!2.40e-08!23;UBERON:0009722!2.40e-08!23;UBERON:0005562!2.40e-08!23;UBERON:0007690!2.40e-08!23;UBERON:0001474!2.60e-08!22;UBERON:0004765!2.60e-08!22;UBERON:0001434!2.60e-08!22;UBERON:0003408!3.23e-08!24;UBERON:0006562!1.32e-07!24;UBERON:0001557!1.32e-07!24;UBERON:0001042!1.32e-07!24;UBERON:0008814!1.32e-07!24;UBERON:0009145!1.32e-07!24;UBERON:0002204!5.26e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.58e-23,48;UBERON:0002405,2.58e-23,48;UBERON:0002390,6.03e-22,45;UBERON:0003061,6.03e-22,45;UBERON:0004177,6.78e-13,29;UBERON:0005057,6.78e-13,29;UBERON:0003081,2.80e-10,87;UBERON:0002370,4.28e-10,23;UBERON:0000974,4.28e-10,23;UBERON:0004807,4.28e-10,23;UBERON:0005058,4.28e-10,23;UBERON:0003351,4.28e-10,23;UBERON:0009113,4.28e-10,23;UBERON:0003295,4.28e-10,23;UBERON:0009722,4.28e-10,23;UBERON:0005562,4.28e-10,23;UBERON:0007690,4.28e-10,23;UBERON:0003408,6.36e-10,24;UBERON:0002371,8.94e-10,16;UBERON:0001474,2.04e-09,22;UBERON:0004765,2.04e-09,22;UBERON:0001434,2.04e-09,22;UBERON:0000077,2.74e-09,35;UBERON:0006562,3.06e-09,24;UBERON:0001557,3.06e-09,24;UBERON:0001042,3.06e-09,24;UBERON:0008814,3.06e-09,24;UBERON:0009145,3.06e-09,24;UBERON:0002204,1.72e-08,32;UBERON:0001041,6.19e-08,80;UBERON:0002384,1.89e-07,46;UBERON:0000065,2.07e-07,41;UBERON:0001004,2.17e-07,42;UBERON:0000072,4.00e-07,27 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,49.5833562015653,10.2775767170717,11.9372908424217,65.4052638621429,56.0000556147262,48.9634087603248,52.0151394393035,11.6588416635482,19.0326751346436,12.5921138063066,50.7894086226763,44.6993053554708,40.7414065726109,3.31668831589172,58.5816612085223,63.4715487607613,8.31960598525715,8.02932483735095,0,0,0,0.570070258369122,0.756090389279792,1.10865255327652,0,0,0,0,0,0,180.805664478344,98.4482534099989,177.474549207118,164.116585160653,165.297007359944,188.378016976088,0,0,0,0.782391344348039,0,0,0,0,0,35.7376950902978,32.6412963905105,23.8626597391149,0.514518872071894,2.0057340795713,1.03134418455488,0.404632921719196,2.11596391708813,0.633831403506179,0,0,64.7927796442607,55.3765163037506,64.6536904600951,22.4700082888804,15.3687322128622,0.207379224616955,0.810035629990144,0.210324961351382,0,1.10434270475807,0.734944795289724,1.0543001812006,0.919218786610021,1.10115880999389,2.55374676170375,1.53606533256243,0.659431438650969,0.914876436024097,0,1.95428099300967,1.12552522006336,0.763991238884051,1.17851434189467,0.569486723196412,0.931997229126503,1.06016670666458,0.151143120213571,0,0.860423876981386,0,0,0.649776417447669,0,7.16266542671934,0,0,0,0,0,0,0,0,0,0,3.65388415100992,38.3228067797814,3.41416919849097,1.04091196059682,0.913396434936424,2.07553947530453,0.904335843315735,0.823120949949934,0.628332956648377,0.247194967734374,1.44599356919912,45.1151381494436,3.23533699894818,14.575540218386,13.5765070877862,0,0.878342391034642,0.41889341362691,2.29911349687732,38.4606549664004,29.395233818677,44.3475092484996,1.19832511523858,1.83000241127451,0.376963056338593,2.60736480288415,1.53429274398198,1.0389402227978,1.29793010454206,1.62942982160506,13.1871388846699,1.51633655060205,0.210441855886474,0.390361328888111,0.229902104433473,0,0.452114453507145,0.476255494059295,0,0.374806898238915,0,0.215567992932842,0.189106080167819,0.527853372491847,0.876782929710299,1.66828349535359,1.39300866608867,1.23469281844766,0.398068533636986,47.7504967373,47.3520149091076,45.1819964038992,0.414251545071004,0.469052119962192,0.180062061461015,0,1.57411385397923,0.308534225774757,0.465067889500816,0,0.700592054203017,0.987359099480883,0.492502392237286,0.891756905004413,1.02339991197733,1.09775057645525,0.939444931322602,3.78521907415429,0.514523061896422,1.32167513193519,1.05780226665418,0.426576501070468,0.232236671860439,1.15980715189884,1.00841762311671,1.11189021922435,1.71203063501303,1.42358718463353,0.494096864172033,1.75934646160189,1.59165177632921,1.16978452271472,0.898819408654221,1.08069024937347,0.597423819763102,0.569003702859245,0.342745537829186,0,0.203651327845314,0.387904974335251,0.701358198903186,0.126473074248515,0.442830443938806,0.470996183524124,0.370191491765402,0.889357881261447,2.33583148002532,3.53806191203765,6.07127703439105,9.73728582664814,11.8176808278684,10.1850340712568,12.6586300478357,11.9980067813526,9.88421087477093,4.31304619582064,8.93138274404408,5.30464044294753,2.27320990152401,0.717589654087649,0.964887042726734,6.83586803616437,0.568474235311454,0.488894929326078,0.509235257325564,0.938760993154008,2.51259386162724,1.6663054862021,3.51240566144038,3.31033802623001,4.65075848262427,2.23236676120482,5.57135270033509,7.59813920209941,5.35201516751593,10.5553898757491,7.61467957346193,1.96705709207614,2.75936746304733,1.60550589987792,1.17211686592203,0,2.01976741763498,0,0,0,0,0,0,0,0,0,0.963963949265421,1.27746076687442,1.42452482933804,1.14020871547503,2.96946221350564,2.65490276679926,0.242780636154981,0.302323556964751,1.13163047853539,0.295301892880773,1.22974059177571,1.03371317267288,0.727067458955011,0.712994756769443,1.26414703174326,1.05418608574999,0,1.02131881726136,0.36012218806262,0,1.07168517515796,0.709360934569094,0.891844088010353,0.658196082408484,0,2.81606049676452,0.21183207086382,0.441056796109924,0.49465875882444,0.807322133479528,0.542816324353403,0.119372344003136,0.656563598980245,2.33184669303881,2.41052892613663,29.7315332588264,14.4470807574256,17.963869154862,22.7925832975676,19.4105803363856,24.0217081866849,41.6447153484946,39.7462124599189,39.1105925866519,0,0.949007980743406,1.01659733563424,1.51207477150522,1.67270636811575,0.87345025498471,1.07891477107857,2.39695021603474,0.26175594198403,0.648074866458964,1.24267862617385,0,0.149516546043979,0,0.388902376688095,0.516639293910924,0.844780627453891,0.938857909166032,0,0.104859344425711,0,0.576060012515731,55.6179572305594,22.5024988972082,29.5807556634702,36.5077512567604,37.2375526988361,44.1072607614408,52.4052159907064,45.6360638969444,52.8054533228812,49.6868379390599,56.9667946023149,52.7247134802061,53.3975721103828,46.0494994595382,0.226730383615211,0,0,0,0.386379188064381,3.19060208267009,1.28206136987086,0.214368379079066,1.50471631210609,1.6942555278512,1.84130094602871,0.572895513439397,0.859265911718438,0,0.755393897389701,1.35004500046361,0,0.453142408984205,1.55328093525546,0.103787347584177,0.798049746802062,1.707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| |||
|short_description=p1@Parvg | |||
}} |
Revision as of 18:35, 5 August 2015
Short description: | p1@Parvg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Parvg_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000139235, ENSMUST00000151072_5end |
EntrezGene: | 64099 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.07e-12 | 32 |
hematopoietic oligopotent progenitor cell | 2.07e-12 | 32 |
hematopoietic stem cell | 2.07e-12 | 32 |
hematopoietic multipotent progenitor cell | 2.07e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 6.73e-10 | 25 |
leukocyte | 9.26e-09 | 17 |
nongranular leukocyte | 9.26e-09 | 17 |
lymphoid lineage restricted progenitor cell | 2.51e-08 | 12 |
T cell | 7.88e-08 | 11 |
pro-T cell | 7.88e-08 | 11 |
connective tissue cell | 1.89e-07 | 46 |
mesenchymal cell | 1.89e-07 | 46 |
lymphocyte | 3.25e-07 | 13 |
common lymphoid progenitor | 3.25e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.58e-23 | 48 |
immune system | 2.58e-23 | 48 |
hematopoietic system | 6.03e-22 | 45 |
blood island | 6.03e-22 | 45 |
hemopoietic organ | 6.78e-13 | 29 |
immune organ | 6.78e-13 | 29 |
lateral plate mesoderm | 2.80e-10 | 87 |
thymus | 4.28e-10 | 23 |
neck | 4.28e-10 | 23 |
respiratory system epithelium | 4.28e-10 | 23 |
hemolymphoid system gland | 4.28e-10 | 23 |
pharyngeal epithelium | 4.28e-10 | 23 |
thymic region | 4.28e-10 | 23 |
pharyngeal gland | 4.28e-10 | 23 |
entire pharyngeal arch endoderm | 4.28e-10 | 23 |
thymus primordium | 4.28e-10 | 23 |
early pharyngeal endoderm | 4.28e-10 | 23 |
gland of gut | 6.36e-10 | 24 |
bone marrow | 8.94e-10 | 16 |
bone element | 2.04e-09 | 22 |
skeletal element | 2.04e-09 | 22 |
skeletal system | 2.04e-09 | 22 |
mixed endoderm/mesoderm-derived structure | 2.74e-09 | 35 |
pharynx | 3.06e-09 | 24 |
upper respiratory tract | 3.06e-09 | 24 |
chordate pharynx | 3.06e-09 | 24 |
pharyngeal arch system | 3.06e-09 | 24 |
pharyngeal region of foregut | 3.06e-09 | 24 |
musculoskeletal system | 1.72e-08 | 32 |
foregut | 6.19e-08 | 80 |
connective tissue | 1.89e-07 | 46 |
respiratory tract | 2.07e-07 | 41 |
respiratory system | 2.17e-07 | 42 |
segment of respiratory tract | 4.00e-07 | 27 |