Personal tools

FFCP PHASE1:Mm9::chr7:99968402..99968425,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=75985|HGNC=|MCL_coexpression_id=191|UniProt=Q923S9|association_with_transcript=0bp_to_ENSMUST00000107180,uc009iig.1_5end|description=CAGE_peak_2_at_Rab30_5end|id=chr7:99968402..99968425,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,2.17e-07,6;CL:0000677,2.17e-07,6;CL:0000584,2.17e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!8.64e-13!130;UBERON:0000925!8.64e-13!130;UBERON:0006595!8.64e-13!130;UBERON:0004923!2.32e-12!24;UBERON:0001007!3.99e-12!128;UBERON:0001555!3.99e-12!128;UBERON:0007026!3.99e-12!128;UBERON:0005409!2.49e-11!59;UBERON:0004921!4.01e-11!126;UBERON:0004185!4.01e-11!126;UBERON:0000160!2.94e-10!43;UBERON:0000344!3.26e-09!15;UBERON:0001242!7.10e-08!13;UBERON:0000060!7.10e-08!13;UBERON:0001262!7.10e-08!13;UBERON:0004786!7.10e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.13e-16,31;UBERON:0005409,4.67e-14,47;UBERON:0004923,1.05e-10,24;UBERON:0004119,1.56e-09,118;UBERON:0000925,1.56e-09,118;UBERON:0006595,1.56e-09,118;UBERON:0001007,2.84e-09,116;UBERON:0001555,2.84e-09,116;UBERON:0007026,2.84e-09,116;UBERON:0000344,6.76e-09,15;UBERON:0004921,3.05e-08,114;UBERON:0001242,3.32e-07,13;UBERON:0001262,3.32e-07,13;UBERON:0004786,3.32e-07,13|phase1_expression=0,361.538522314378,374.919373256978,166.355316218757,177.817984130953,26.3570456901667,25.9310031061034,0,0,0,0,0.0797721589953364,0.171200729931206,0,5.3297561890506,14.3757439846776,2.09868563438444,56.1522654337663,53.0632858054209,56.01943403734,0.510259740906419,0.794327609607082,0.783599367416806,61.757075198255,66.9875100716136,211.891594758442,101.659831093542,136.393290290168,8.36103045608045,8.56902441183765,18.4036323843903,0,0,0,0.866554859253824,0.831173226792462,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.5963033322285,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,54.39770669662,1.61910957491345,3.24888208723835,8.51251085484938,4.35377702408431,0,0,0,0,0,0,0,0,0,0,35.2828188331895,26.4116641320115,0,0,0,0,0.301445281105245,3.41007250693544,0,132.496502705624,0.433798070759735,0.884610551949874,0,0.220841518460394,0,0,0,0,21.9693067479389,0.479260498023681,0.599902730993408,0.381210681219194,0.149790639404823,0,0,0,0,0,0,0.101839363850316,1.24406970610093,0,0,0,0,0,0,0,0,0,0,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0.439100230582101,0,0,0,66.4141753797434,197.01567216434,0.213288250535234,0,0,7.66397393568702,19.7916459021935,52.6924984331789,72.1284173547658,276.858942891062,105.812122904913,110.420841982839,112.494278267732,59.3220809711786,69.5964520596515,58.547534336784,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0.246794327843601,3.55743152504579,0,0,0.224862112384854,0,0.482354319504834,0.50925170356284,2.30156909960649,164.405119949886,14.2771934857802,20.1275489138296,27.5384301274693,8.11297950097858,3.03094653536534,1.79397413521912,7.23665282045051,1.66277871149944,0,0,0,0,0,0,0.390267295715598,0.630540576424764,0,0.637819074629948,1.14704320301017,1.72684981865896,1.3018415272336,0,0,2.95058563811422,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0.295301892880773,0.307435147943927,135.674853913316,0,1.06949213515416,0.632073515871632,0,0,5.7874732978144,0,0,0,0.177340233642274,0.356737635204141,0.658196082408484,3.95804433848979,0.704015124191131,14.4045808187398,0.220528398054962,0.16488625294148,0,0,0.119372344003136,0,116.59233465194,0,7.34744787430767,0.206386867963223,0.740778109478847,3.95573759709851,8.06495943554049,8.46479240864134,0,0.139951452323658,0.552799895217695,0,0,0,0.216010681643603,0.836353184057875,6.55087691238533,1.34864346384821,2.64491058321075,0,0.129614973291793,0.621339313086926,0,0.299033092087958,0,0,0,0,0.117357238645754,0,0,0,0,1.89606672376907,0,0.205421914329655,0,0,0,0.360586348559907,0.147689527174577,0.201932899896295,0.609654453239999,0.806609481094724,0.779663045918019,0.577271049841977,0.818138315270983,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,2.00022055021454,2.06035057238894,3.85103051510178,2.52697211763797,1.77435509923168,3.39527414494937,2.62196220915671,2.24088033417042,3.67587001315925,1.42888107384922,2.20180219295225,1.54327376370964,2.06042950401653,2.79677948255355,2.40008476669791,3.37204031702741,2.14592570952589,3.19762116591123,2.54095327121393,2.5384382367503,2.92684756596436,2.10455769150274,3.12349461845482,1.68342681497322,2.49133538060766,1.77308068276014,2.45538625901814,2.78886314134739,1.73615949883027,0,3.50897412668113,10.5286816483666,0,0.661774257358546,0|short_description=p2@Rab30}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:75985
|HGNC=
|MCL_coexpression_id=191
|TSSclassifier=NA
|UniProt=uniprot:Q923S9
|association_with_transcript=0bp_to_ENSMUST00000107180,uc009iig.1_5end
|cluster_id=chr7:99968402..99968425,+
|description=CAGE_peak_2_at_Rab30_5end
|id=chr7:99968402..99968425,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000239,2.17e-07,6;CL:0000677,2.17e-07,6;CL:0000584,2.17e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!8.64e-13!130;UBERON:0000925!8.64e-13!130;UBERON:0006595!8.64e-13!130;UBERON:0004923!2.32e-12!24;UBERON:0001007!3.99e-12!128;UBERON:0001555!3.99e-12!128;UBERON:0007026!3.99e-12!128;UBERON:0005409!2.49e-11!59;UBERON:0004921!4.01e-11!126;UBERON:0004185!4.01e-11!126;UBERON:0000160!2.94e-10!43;UBERON:0000344!3.26e-09!15;UBERON:0001242!7.10e-08!13;UBERON:0000060!7.10e-08!13;UBERON:0001262!7.10e-08!13;UBERON:0004786!7.10e-08!13
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.13e-16,31;UBERON:0005409,4.67e-14,47;UBERON:0004923,1.05e-10,24;UBERON:0004119,1.56e-09,118;UBERON:0000925,1.56e-09,118;UBERON:0006595,1.56e-09,118;UBERON:0001007,2.84e-09,116;UBERON:0001555,2.84e-09,116;UBERON:0007026,2.84e-09,116;UBERON:0000344,6.76e-09,15;UBERON:0004921,3.05e-08,114;UBERON:0001242,3.32e-07,13;UBERON:0001262,3.32e-07,13;UBERON:0004786,3.32e-07,13
|phase1_expression=0,361.538522314378,374.919373256978,166.355316218757,177.817984130953,26.3570456901667,25.9310031061034,0,0,0,0,0.0797721589953364,0.171200729931206,0,5.3297561890506,14.3757439846776,2.09868563438444,56.1522654337663,53.0632858054209,56.01943403734,0.510259740906419,0.794327609607082,0.783599367416806,61.757075198255,66.9875100716136,211.891594758442,101.659831093542,136.393290290168,8.36103045608045,8.56902441183765,18.4036323843903,0,0,0,0.866554859253824,0.831173226792462,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.5963033322285,1.45072428402269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,54.39770669662,1.61910957491345,3.24888208723835,8.51251085484938,4.35377702408431,0,0,0,0,0,0,0,0,0,0,35.2828188331895,26.4116641320115,0,0,0,0,0.301445281105245,3.41007250693544,0,132.496502705624,0.433798070759735,0.884610551949874,0,0.220841518460394,0,0,0,0,21.9693067479389,0.479260498023681,0.599902730993408,0.381210681219194,0.149790639404823,0,0,0,0,0,0,0.101839363850316,1.24406970610093,0,0,0,0,0,0,0,0,0,0,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0.439100230582101,0,0,0,66.4141753797434,197.01567216434,0.213288250535234,0,0,7.66397393568702,19.7916459021935,52.6924984331789,72.1284173547658,276.858942891062,105.812122904913,110.420841982839,112.494278267732,59.3220809711786,69.5964520596515,58.547534336784,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0.246794327843601,3.55743152504579,0,0,0.224862112384854,0,0.482354319504834,0.50925170356284,2.30156909960649,164.405119949886,14.2771934857802,20.1275489138296,27.5384301274693,8.11297950097858,3.03094653536534,1.79397413521912,7.23665282045051,1.66277871149944,0,0,0,0,0,0,0.390267295715598,0.630540576424764,0,0.637819074629948,1.14704320301017,1.72684981865896,1.3018415272336,0,0,2.95058563811422,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.162886959353576,0,0,0,0,0,0.295301892880773,0.307435147943927,135.674853913316,0,1.06949213515416,0.632073515871632,0,0,5.7874732978144,0,0,0,0.177340233642274,0.356737635204141,0.658196082408484,3.95804433848979,0.704015124191131,14.4045808187398,0.220528398054962,0.16488625294148,0,0,0.119372344003136,0,116.59233465194,0,7.34744787430767,0.206386867963223,0.740778109478847,3.95573759709851,8.06495943554049,8.46479240864134,0,0.139951452323658,0.552799895217695,0,0,0,0.216010681643603,0.836353184057875,6.55087691238533,1.34864346384821,2.64491058321075,0,0.129614973291793,0.621339313086926,0,0.299033092087958,0,0,0,0,0.117357238645754,0,0,0,0,1.89606672376907,0,0.205421914329655,0,0,0,0.360586348559907,0.147689527174577,0.201932899896295,0.609654453239999,0.806609481094724,0.779663045918019,0.577271049841977,0.818138315270983,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,2.00022055021454,2.06035057238894,3.85103051510178,2.52697211763797,1.77435509923168,3.39527414494937,2.62196220915671,2.24088033417042,3.67587001315925,1.42888107384922,2.20180219295225,1.54327376370964,2.06042950401653,2.79677948255355,2.40008476669791,3.37204031702741,2.14592570952589,3.19762116591123,2.54095327121393,2.5384382367503,2.92684756596436,2.10455769150274,3.12349461845482,1.68342681497322,2.49133538060766,1.77308068276014,2.45538625901814,2.78886314134739,1.73615949883027,0,3.50897412668113,10.5286816483666,0,0.661774257358546,0
|short_description=p2@Rab30
}}

Revision as of 18:51, 5 August 2015

Short description:p2@Rab30
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rab30_5end
Coexpression cluster:MCL_coexpression_mm9:191
Association with transcript: 0bp_to_ENSMUST00000107180, uc009iig.1_5end
EntrezGene:75985
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rab30

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5361.54
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6374.92
CD326+ enterocyte, pool1.CNhs13542.11848-124I3166.36
CD326+ enterocyte, pool2.CNhs13197.11849-124I4177.82
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I726.36
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I825.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A15.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A314.38
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A256.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A453.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A656.02
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D161.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D266.99
GP2+ M cell, pool1.CNhs13228.11845-124H9211.89
GP2+ M cell, pool2.CNhs13231.11846-124I1101.66
GP2+ M cell, pool3.CNhs13240.11847-124I2136.39
Ileum epithelium, pool1.CNhs13199.10252-104B98.36
Ileum epithelium, pool2.CNhs13232.10253-104C18.57
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C818.40
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A264.60
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C454.40
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.51
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.35
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B635.28
accessory axillary lymph node, adult.CNhs10475.1063-29H926.41
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C13.41
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A8132.50
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H721.97
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.48
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.24
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I366.41
intestine, adult.CNhs10496.178-9A3197.02
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H47.66
intestine, embryo E17.CNhs10582.482-18D319.79
intestine, embryo E18.CNhs10526.1289-20F752.69
intestine, neonate N00.CNhs11126.644-26D172.13
intestine, neonate N01.CNhs11192.1322-23E9276.86
intestine, neonate N06.CNhs11102.688-20B8105.81
intestine, neonate N07.CNhs11095.720-20F2110.42
intestine, neonate N10.CNhs11098.755-23A5112.49
intestine, neonate N20.CNhs11187.827-18D159.32
intestine, neonate N25.CNhs11121.1352-25E369.60
intestine, neonate N30.CNhs11131.1384-42G158.55
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G42.30
liver, neonate N00.CNhs11117.641-24F4164.41
liver, neonate N03.CNhs11123.1345-25G214.28
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H227.54
liver, neonate N10.CNhs11115.751-24B98.11
liver, neonate N20.CNhs11220.823-25A33.03
liver, neonate N25.CNhs11198.1368-26H11.79
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B62.95
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G9135.67
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.79
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G314.40
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I1116.59
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G27.35
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D13.96
spleen, neonate N20.CNhs11112.824-19H18.06
spleen, neonate N25.CNhs11099.1354-25G38.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C66.55
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A92.64
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.61
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A20.78
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.85
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.20
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.54
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F91.74
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C210.53
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
brush border epithelial cell2.17e-076
gut absorptive cell2.17e-076
enterocyte2.17e-076

Uber anatomy
Ontology termp-valuen
intestine6.13e-1631
gastrointestinal system4.67e-1447
organ component layer1.05e-1024
endoderm-derived structure1.56e-09118
endoderm1.56e-09118
presumptive endoderm1.56e-09118
digestive system2.84e-09116
digestive tract2.84e-09116
primitive gut2.84e-09116
mucosa6.76e-0915
subdivision of digestive tract3.05e-08114
intestinal mucosa3.32e-0713
wall of intestine3.32e-0713
gastrointestinal system mucosa3.32e-0713
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:99968402..99968425,%2B&oldid=3931002"