FFCP PHASE1:Mm9::chr6:4704429..4704440,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=144|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:4704429..4704440,+|id=chr6:4704429..4704440,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000349,2.38e-13,3;CL:0000351,2.38e-13,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002369!7.01e-07!7;UBERON:0006858!7.01e-07!7|ontology_enrichment_uberon_v019_2=UBERON:0002369,8.87e-14,7;UBERON:0006858,8.87e-14,7;UBERON:0005631,2.38e-13,3;UBERON:0000478,2.38e-13,3;UBERON:0000158,2.38e-13,3;UBERON:0000358,2.38e-13,3;UBERON:0000307,2.38e-13,3;UBERON:0007010,2.38e-13,3;UBERON:0001987,2.19e-09,2;UBERON:0003124,2.19e-09,2;UBERON:0004340,2.19e-09,2;UBERON:0003064,8.79e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,0.183546752161682,0,1.30815093828268,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0,0,1.71920063963254,0,0.809265843438391,0,0,0.338844532069132,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.662605622854841,0.122490799214954,0.191690942036473,0,1.10115880999389,0,0.768032666281217,0.395658863190582,0.914876436024097,1.56274011167028,0.837548997004143,1.12552522006336,1.06958773443767,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0.890652834388949,1.56136794089522,2.74018930480927,1.15307748628029,0.904335843315735,1.41106448562846,1.13099932196708,15.3260879995312,0,0,0.485300549842228,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0,0,0,0.376963056338593,0.173824320192276,0,0.20778804455956,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0.431135985865684,0.378212160335639,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.492502392237286,0,0,0,0,0,0.205809224758569,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0.445597348164788,0,0,0.584511715822624,0.395287777946524,0,0,0.178065603667255,0.162886959353576,0,0,1.45668381692989,0.906970670894253,0.754420319023592,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0.36012218806262,1.03486947026204,1.28602221018955,0.532020700926821,0.891844088010353,0.329098041204242,0,3.52007562095566,7.62595455109753,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0,0,0.218362563746178,0,0,0,0,0,0.56369293868419,1.04661582230785,0,0,0,0,0.469428954583016,0.13020438484395,0,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,9.98936790183291,2.33256027184637,18.4673078000486,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0.62272408550506,0,0,0,0.419226325255965,0.183843508450014,0.888986911206461,0.618105171716683,0.320919209591815,0,0.25347929989024,0.188626341386076,0.561849044819294,0.320125762024346,0.574354689556133,0.476293691283074,0.115884325944855,0.192909220463705,0,0.588795680537589,0.685738504770831,1.24233064311536,0.715308569841963,0.145346416632329,0.752875043322645,0.592302255241736,0.365855945745545,0,0.679020569229309,0.561142271657738,0.474540072496697,0.492522411877817,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p@chr6:4704429..4704440,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=144 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:4704429..4704440,+ | |||
|description=CAGE_peak_at_chr6:4704429..4704440,+ | |||
|id=chr6:4704429..4704440,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.38e-13,3;CL:0000351,2.38e-13,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!7.01e-07!7;UBERON:0006858!7.01e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,8.87e-14,7;UBERON:0006858,8.87e-14,7;UBERON:0005631,2.38e-13,3;UBERON:0000478,2.38e-13,3;UBERON:0000158,2.38e-13,3;UBERON:0000358,2.38e-13,3;UBERON:0000307,2.38e-13,3;UBERON:0007010,2.38e-13,3;UBERON:0001987,2.19e-09,2;UBERON:0003124,2.19e-09,2;UBERON:0004340,2.19e-09,2;UBERON:0003064,8.79e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506884656097573,0.183546752161682,0,1.30815093828268,0.439372365468944,0.194429899074283,0.279972843250725,0,0,0,0,0,1.71920063963254,0,0.809265843438391,0,0,0.338844532069132,0,0,0,0,0,0,0,0.135005938331691,0,0.285650984403804,0.662605622854841,0.122490799214954,0.191690942036473,0,1.10115880999389,0,0.768032666281217,0.395658863190582,0.914876436024097,1.56274011167028,0.837548997004143,1.12552522006336,1.06958773443767,0.294628585473668,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0,0,0,0,0.890652834388949,1.56136794089522,2.74018930480927,1.15307748628029,0.904335843315735,1.41106448562846,1.13099932196708,15.3260879995312,0,0,0.485300549842228,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0,0.11981512450592,0,0,0,0,0.376963056338593,0.173824320192276,0,0.20778804455956,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0.12811372028485,0.0937017245597288,0,0.431135985865684,0.378212160335639,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.492502392237286,0,0,0,0,0,0.205809224758569,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0,0,0,0.274561413188081,1.43768206527355,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0.315508219416257,0.390438744296638,0,0.238968797952552,0.445597348164788,0,0,0.584511715822624,0.395287777946524,0,0,0.178065603667255,0.162886959353576,0,0,1.45668381692989,0.906970670894253,0.754420319023592,0,0.614870295887855,0,0,0.356497378384721,0,0,0,0,0.36012218806262,1.03486947026204,1.28602221018955,0.532020700926821,0.891844088010353,0.329098041204242,0,3.52007562095566,7.62595455109753,0.220528398054962,0,0.161464426695906,0.0603129249281559,0,0,0,0.370850604021019,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0,0,0.218362563746178,0,0,0,0,0,0.56369293868419,1.04661582230785,0,0,0,0,0.469428954583016,0.13020438484395,0,0.241584120826006,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,9.98936790183291,2.33256027184637,18.4673078000486,0,0,0,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0,0,0.62272408550506,0,0,0,0.419226325255965,0.183843508450014,0.888986911206461,0.618105171716683,0.320919209591815,0,0.25347929989024,0.188626341386076,0.561849044819294,0.320125762024346,0.574354689556133,0.476293691283074,0.115884325944855,0.192909220463705,0,0.588795680537589,0.685738504770831,1.24233064311536,0.715308569841963,0.145346416632329,0.752875043322645,0.592302255241736,0.365855945745545,0,0.679020569229309,0.561142271657738,0.474540072496697,0.492522411877817,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr6:4704429..4704440,+ | |||
}} |
Latest revision as of 19:15, 5 August 2015
Short description: | p@chr6:4704429..4704440, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:4704429..4704440, + |
Coexpression cluster: | MCL_coexpression_mm9:144 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.38e-13 | 3 |
trophoblast cell | 2.38e-13 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 8.87e-14 | 7 |
adrenal/interrenal gland | 8.87e-14 | 7 |
extraembryonic membrane | 2.38e-13 | 3 |
extraembryonic structure | 2.38e-13 | 3 |
membranous layer | 2.38e-13 | 3 |
blastocyst | 2.38e-13 | 3 |
blastula | 2.38e-13 | 3 |
cleaving embryo | 2.38e-13 | 3 |
placenta | 2.19e-09 | 2 |
chorion | 2.19e-09 | 2 |
allantois | 2.19e-09 | 2 |
intermediate mesoderm | 8.79e-07 | 14 |