FFCP PHASE1:Mm9::chr3:107746308..107746339,-: Difference between revisions
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{{FFCP|EntrezGene=14867|HGNC=|MCL_coexpression_id=77|UniProt=D3YVP9|association_with_transcript=0bp_to_ENSMUST00000106681_5end|description=CAGE_peak_3_at_Gstm6_5end|id=chr3:107746308..107746339,-|ontology_enrichment_celltype=CL:0002563!1.05e-08!9;CL:0002251!1.05e-08!9;CL:0000223!3.98e-07!20|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!3.84e-20!18;UBERON:0005564!3.84e-20!18;UBERON:0004176!5.66e-19!17;UBERON:0009196!5.66e-19!17;UBERON:0009117!5.66e-19!17;UBERON:0003135!4.93e-17!15;UBERON:0000473!6.29e-16!14;UBERON:0003101!1.17e-15!16;UBERON:0000079!1.17e-15!16;UBERON:0003133!1.73e-15!24;UBERON:0005156!8.17e-14!26;UBERON:0000990!8.17e-14!26;UBERON:0000344!9.58e-09!15;UBERON:0003350!1.05e-08!9;UBERON:0004808!1.05e-08!9;UBERON:0001277!1.05e-08!9;UBERON:0000466!1.05e-08!79;UBERON:0003886!1.50e-08!38;UBERON:0002553!3.50e-08!39;UBERON:0000485!3.71e-08!11;UBERON:0002323!8.25e-08!37;UBERON:0004458!8.25e-08!37;UBERON:0001242!6.16e-07!13;UBERON:0000060!6.16e-07!13;UBERON:0001262!6.16e-07!13;UBERON:0004786!6.16e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000991,2.21e-37,18;UBERON:0005564,2.21e-37,18;UBERON:0004176,6.35e-35,17;UBERON:0009196,6.35e-35,17;UBERON:0009117,6.35e-35,17;UBERON:0003135,6.95e-35,15;UBERON:0000473,1.56e-32,14;UBERON:0003101,1.67e-32,16;UBERON:0000079,1.67e-32,16;UBERON:0003133,1.19e-30,24;UBERON:0005156,5.46e-28,26;UBERON:0000990,5.46e-28,26;UBERON:0003886,6.68e-18,38;UBERON:0002553,2.43e-17,39;UBERON:0002323,2.82e-16,37;UBERON:0004458,2.82e-16,37;UBERON:0001301,5.85e-08,3;UBERON:0006555,5.85e-08,3;UBERON:0005103,5.85e-08,3;UBERON:0000083,5.85e-08,3;UBERON:0009201,5.85e-08,3;UBERON:0004819,5.85e-08,3;UBERON:0006553,5.85e-08,3;UBERON:0003074,5.85e-08,3;UBERON:0003060,5.85e-08,3|phase1_expression=0.160148847104794,1.39590163055744,0.909998478779072,0.60492842261366,1.00179145989269,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,1.91990907352088,1.14704640533585,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0229671388697,4.0798280022465,8.63525106620507,1.29955283489534,0.896053774194671,3.23022166303029,0,0,0,0,0,0,0,0,0,0,2.62622923353838,0,0,0.173485326766136,0,0.230615497256059,0.753613202763113,1.17588707135705,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0,1.32391173005411,1.11966273549084,3.0326731012041,0,0.260240885925407,0,0,0,0,0.12811372028485,0,0,0,0.189106080167819,0,0,0,0,0,4.17971960318836,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,1.05780226665418,0.639864751605702,0,0,0.201683524623343,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0.432276099749388,1.39398891278057,0,0,0,0.407302655690628,0.193952487167626,0,0.0632365371242573,0,0,0,3.55743152504579,0,0,0,0.405720242777006,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0.505157755894224,5.38192240565737,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,4.62970569534864,2.44330439030364,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0.259229946583586,0,30.4394186889463,13.3069725979141,14.8912641411388,13.2226808073952,13.8201011121172,18.0783054275133,16.3126561717598,38.6707022986532,54.7365777902211,28.5069262574687,18.4339204005034,0,0.608175645870493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0|short_description=p3@Gstm6}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:14867 | |||
|HGNC= | |||
|MCL_coexpression_id=77 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YVP9 | |||
|association_with_transcript=0bp_to_ENSMUST00000106681_5end | |||
|cluster_id=chr3:107746308..107746339,- | |||
|description=CAGE_peak_3_at_Gstm6_5end | |||
|id=chr3:107746308..107746339,- | |||
|ontology_enrichment_celltype=CL:0002563!1.05e-08!9;CL:0002251!1.05e-08!9;CL:0000223!3.98e-07!20 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!3.84e-20!18;UBERON:0005564!3.84e-20!18;UBERON:0004176!5.66e-19!17;UBERON:0009196!5.66e-19!17;UBERON:0009117!5.66e-19!17;UBERON:0003135!4.93e-17!15;UBERON:0000473!6.29e-16!14;UBERON:0003101!1.17e-15!16;UBERON:0000079!1.17e-15!16;UBERON:0003133!1.73e-15!24;UBERON:0005156!8.17e-14!26;UBERON:0000990!8.17e-14!26;UBERON:0000344!9.58e-09!15;UBERON:0003350!1.05e-08!9;UBERON:0004808!1.05e-08!9;UBERON:0001277!1.05e-08!9;UBERON:0000466!1.05e-08!79;UBERON:0003886!1.50e-08!38;UBERON:0002553!3.50e-08!39;UBERON:0000485!3.71e-08!11;UBERON:0002323!8.25e-08!37;UBERON:0004458!8.25e-08!37;UBERON:0001242!6.16e-07!13;UBERON:0000060!6.16e-07!13;UBERON:0001262!6.16e-07!13;UBERON:0004786!6.16e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,2.21e-37,18;UBERON:0005564,2.21e-37,18;UBERON:0004176,6.35e-35,17;UBERON:0009196,6.35e-35,17;UBERON:0009117,6.35e-35,17;UBERON:0003135,6.95e-35,15;UBERON:0000473,1.56e-32,14;UBERON:0003101,1.67e-32,16;UBERON:0000079,1.67e-32,16;UBERON:0003133,1.19e-30,24;UBERON:0005156,5.46e-28,26;UBERON:0000990,5.46e-28,26;UBERON:0003886,6.68e-18,38;UBERON:0002553,2.43e-17,39;UBERON:0002323,2.82e-16,37;UBERON:0004458,2.82e-16,37;UBERON:0001301,5.85e-08,3;UBERON:0006555,5.85e-08,3;UBERON:0005103,5.85e-08,3;UBERON:0000083,5.85e-08,3;UBERON:0009201,5.85e-08,3;UBERON:0004819,5.85e-08,3;UBERON:0006553,5.85e-08,3;UBERON:0003074,5.85e-08,3;UBERON:0003060,5.85e-08,3 | |||
|phase1_expression=0.160148847104794,1.39590163055744,0.909998478779072,0.60492842261366,1.00179145989269,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,5.69790044012167,0,0,1.91990907352088,1.14704640533585,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.0229671388697,4.0798280022465,8.63525106620507,1.29955283489534,0.896053774194671,3.23022166303029,0,0,0,0,0,0,0,0,0,0,2.62622923353838,0,0,0.173485326766136,0,0.230615497256059,0.753613202763113,1.17588707135705,0,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0,1.32391173005411,1.11966273549084,3.0326731012041,0,0.260240885925407,0,0,0,0,0.12811372028485,0,0,0,0.189106080167819,0,0,0,0,0,4.17971960318836,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,1.05780226665418,0.639864751605702,0,0,0.201683524623343,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0,0,0.432276099749388,1.39398891278057,0,0,0,0.407302655690628,0.193952487167626,0,0.0632365371242573,0,0,0,3.55743152504579,0,0,0,0.405720242777006,0.241177159752417,0,0.575392274901621,0,0,0,0,0,0.505157755894224,5.38192240565737,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,4.62970569534864,2.44330439030364,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26175594198403,0.259229946583586,0,30.4394186889463,13.3069725979141,14.8912641411388,13.2226808073952,13.8201011121172,18.0783054275133,16.3126561717598,38.6707022986532,54.7365777902211,28.5069262574687,18.4339204005034,0,0.608175645870493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Gstm6 | |||
}} |
Revision as of 20:40, 5 August 2015
Short description: | p3@Gstm6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gstm6_5end |
Coexpression cluster: | MCL_coexpression_mm9:77 |
Association with transcript: | 0bp_to_ENSMUST00000106681_5end |
EntrezGene: | 14867 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 2.21e-37 | 18 |
gonad primordium | 2.21e-37 | 18 |
external genitalia | 6.35e-35 | 17 |
indifferent external genitalia | 6.35e-35 | 17 |
indifferent gonad | 6.35e-35 | 17 |
male reproductive organ | 6.95e-35 | 15 |
testis | 1.56e-32 | 14 |
male organism | 1.67e-32 | 16 |
male reproductive system | 1.67e-32 | 16 |
reproductive organ | 1.19e-30 | 24 |
reproductive structure | 5.46e-28 | 26 |
reproductive system | 5.46e-28 | 26 |
body cavity precursor | 6.68e-18 | 38 |
anatomical cavity | 2.43e-17 | 39 |
body cavity | 2.82e-16 | 37 |
body cavity or lining | 2.82e-16 | 37 |
epididymis | 5.85e-08 | 3 |
excretory tube | 5.85e-08 | 3 |
mesonephric epithelium | 5.85e-08 | 3 |
mesonephric tubule | 5.85e-08 | 3 |
nephric duct | 5.85e-08 | 3 |
kidney epithelium | 5.85e-08 | 3 |
renal duct | 5.85e-08 | 3 |
mesonephric duct | 5.85e-08 | 3 |
pronephric duct | 5.85e-08 | 3 |