FFCP PHASE1:Mm9::chr11:3892492..3892527,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=70|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:3892492..3892527,+|id=chr11:3892492..3892527,+|ontology_enrichment_celltype=CL:0000630!1.93e-12!3;CL:0000325!2.64e-09!2;CL:0000217!2.64e-09!2;CL:0000328!2.64e-09!2;CL:0002573!2.64e-09!2;CL:0002376!2.64e-09!2;CL:0000218!2.64e-09!2;CL:0000692!2.64e-09!2;CL:0002377!2.64e-09!2;CL:0002375!2.64e-09!2;CL:0000197!2.28e-08!2;CL:0002491!2.28e-08!2;CL:0000098!2.28e-08!2|ontology_enrichment_celltype_v019_2=CL:0000217,1.80e-25,2;CL:0000328,1.80e-25,2;CL:0002573,1.80e-25,2;CL:0002376,1.80e-25,2;CL:0000218,1.80e-25,2;CL:0000692,1.80e-25,2;CL:0002377,1.80e-25,2;CL:0002375,1.80e-25,2;CL:0000215,2.33e-17,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000473!8.45e-18!14;UBERON:0003135!1.54e-16!15;UBERON:0003101!1.97e-15!16;UBERON:0000079!1.97e-15!16;UBERON:0004176!1.86e-14!17;UBERON:0009196!1.86e-14!17;UBERON:0009117!1.86e-14!17;UBERON:0000991!1.37e-13!18;UBERON:0005564!1.37e-13!18;UBERON:0003133!6.66e-10!24;UBERON:0005156!4.73e-09!26;UBERON:0000990!4.73e-09!26;UBERON:0003465!2.28e-08!2;UBERON:0008193!2.28e-08!2;UBERON:0000032!2.28e-08!2;UBERON:0005744!2.28e-08!2;UBERON:0008001!2.28e-08!2;UBERON:0007497!2.28e-08!2;UBERON:0009955!2.28e-08!2;UBERON:0003067!2.28e-08!2;UBERON:0002546!2.28e-08!2;UBERON:0007914!2.28e-08!2;UBERON:0003457!2.28e-08!2;UBERON:0004766!2.28e-08!2;UBERON:0005253!2.28e-08!2;UBERON:0002227!2.28e-08!2;UBERON:0001846!2.28e-08!2;UBERON:0003128!2.28e-08!2;UBERON:0002241!2.28e-08!2;UBERON:0002105!2.28e-08!2;UBERON:0001678!2.28e-08!2;UBERON:0003129!2.28e-08!2;UBERON:0001694!2.28e-08!2;UBERON:0004681!2.28e-08!2;UBERON:0001839!2.28e-08!2;UBERON:0001690!2.28e-08!2;UBERON:0001844!2.28e-08!2;UBERON:0001849!2.28e-08!2;UBERON:0002499!2.28e-08!2;UBERON:0005944!2.28e-08!2;UBERON:0001855!2.28e-08!2;UBERON:0001703!2.28e-08!2;UBERON:0003069!2.28e-08!2;UBERON:0003051!2.28e-08!2;UBERON:0004288!2.28e-08!2;UBERON:0004637!2.28e-08!2;UBERON:0004761!2.28e-08!2;UBERON:0010113!2.28e-08!2;UBERON:0003089!2.28e-08!2;UBERON:0009123!2.28e-08!2;UBERON:0009617!2.28e-08!2;UBERON:0005641!2.28e-08!2|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.20e-15,14;UBERON:0003135,5.65e-14,15;UBERON:0003101,3.91e-13,16;UBERON:0000079,3.91e-13,16;UBERON:0004176,2.16e-12,17;UBERON:0009196,2.16e-12,17;UBERON:0009117,2.16e-12,17;UBERON:0000991,9.91e-12,18;UBERON:0005564,9.91e-12,18;UBERON:0003133,6.53e-09,24;UBERON:0005156,2.94e-08,26;UBERON:0000990,2.94e-08,26|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,1.13589289999776,1.88928900266964,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0.165306911450672,0,0,0,1.69107881605257,0,0,0.583353565032143,0.904118764344118,0.506868376472335,0.234714477291508,0,6.50127935439407,14.2534631287344,3.16833006883652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr11:3892492..3892527,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=70 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:3892492..3892527,+ | |||
|description=CAGE_peak_at_chr11:3892492..3892527,+ | |||
|id=chr11:3892492..3892527,+ | |||
|ontology_enrichment_celltype=CL:0000630!1.93e-12!3;CL:0000325!2.64e-09!2;CL:0000217!2.64e-09!2;CL:0000328!2.64e-09!2;CL:0002573!2.64e-09!2;CL:0002376!2.64e-09!2;CL:0000218!2.64e-09!2;CL:0000692!2.64e-09!2;CL:0002377!2.64e-09!2;CL:0002375!2.64e-09!2;CL:0000197!2.28e-08!2;CL:0002491!2.28e-08!2;CL:0000098!2.28e-08!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,1.80e-25,2;CL:0000328,1.80e-25,2;CL:0002573,1.80e-25,2;CL:0002376,1.80e-25,2;CL:0000218,1.80e-25,2;CL:0000692,1.80e-25,2;CL:0002377,1.80e-25,2;CL:0002375,1.80e-25,2;CL:0000215,2.33e-17,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!8.45e-18!14;UBERON:0003135!1.54e-16!15;UBERON:0003101!1.97e-15!16;UBERON:0000079!1.97e-15!16;UBERON:0004176!1.86e-14!17;UBERON:0009196!1.86e-14!17;UBERON:0009117!1.86e-14!17;UBERON:0000991!1.37e-13!18;UBERON:0005564!1.37e-13!18;UBERON:0003133!6.66e-10!24;UBERON:0005156!4.73e-09!26;UBERON:0000990!4.73e-09!26;UBERON:0003465!2.28e-08!2;UBERON:0008193!2.28e-08!2;UBERON:0000032!2.28e-08!2;UBERON:0005744!2.28e-08!2;UBERON:0008001!2.28e-08!2;UBERON:0007497!2.28e-08!2;UBERON:0009955!2.28e-08!2;UBERON:0003067!2.28e-08!2;UBERON:0002546!2.28e-08!2;UBERON:0007914!2.28e-08!2;UBERON:0003457!2.28e-08!2;UBERON:0004766!2.28e-08!2;UBERON:0005253!2.28e-08!2;UBERON:0002227!2.28e-08!2;UBERON:0001846!2.28e-08!2;UBERON:0003128!2.28e-08!2;UBERON:0002241!2.28e-08!2;UBERON:0002105!2.28e-08!2;UBERON:0001678!2.28e-08!2;UBERON:0003129!2.28e-08!2;UBERON:0001694!2.28e-08!2;UBERON:0004681!2.28e-08!2;UBERON:0001839!2.28e-08!2;UBERON:0001690!2.28e-08!2;UBERON:0001844!2.28e-08!2;UBERON:0001849!2.28e-08!2;UBERON:0002499!2.28e-08!2;UBERON:0005944!2.28e-08!2;UBERON:0001855!2.28e-08!2;UBERON:0001703!2.28e-08!2;UBERON:0003069!2.28e-08!2;UBERON:0003051!2.28e-08!2;UBERON:0004288!2.28e-08!2;UBERON:0004637!2.28e-08!2;UBERON:0004761!2.28e-08!2;UBERON:0010113!2.28e-08!2;UBERON:0003089!2.28e-08!2;UBERON:0009123!2.28e-08!2;UBERON:0009617!2.28e-08!2;UBERON:0005641!2.28e-08!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.20e-15,14;UBERON:0003135,5.65e-14,15;UBERON:0003101,3.91e-13,16;UBERON:0000079,3.91e-13,16;UBERON:0004176,2.16e-12,17;UBERON:0009196,2.16e-12,17;UBERON:0009117,2.16e-12,17;UBERON:0000991,9.91e-12,18;UBERON:0005564,9.91e-12,18;UBERON:0003133,6.53e-09,24;UBERON:0005156,2.94e-08,26;UBERON:0000990,2.94e-08,26 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61582251287033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,1.13589289999776,1.88928900266964,0,0,0,0,0,0,0.280888840263504,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404593039154462,0.165306911450672,0,0,0,1.69107881605257,0,0,0.583353565032143,0.904118764344118,0.506868376472335,0.234714477291508,0,6.50127935439407,14.2534631287344,3.16833006883652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr11:3892492..3892527,+ | |||
}} |
Latest revision as of 21:24, 5 August 2015
Short description: | p@chr11:3892492..3892527, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:3892492..3892527, + |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 1.80e-25 | 2 |
myelin accumulating cell | 1.80e-25 | 2 |
Schwann cell | 1.80e-25 | 2 |
non-myelinating Schwann cell | 1.80e-25 | 2 |
myelinating Schwann cell;;Schwann cell | 1.80e-25 | 2 |
terminal Schwann cell | 1.80e-25 | 2 |
immature Schwann cell | 1.80e-25 | 2 |
Schwann cell precursor | 1.80e-25 | 2 |
barrier cell | 2.33e-17 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 6.20e-15 | 14 |
male reproductive organ | 5.65e-14 | 15 |
male organism | 3.91e-13 | 16 |
male reproductive system | 3.91e-13 | 16 |
external genitalia | 2.16e-12 | 17 |
indifferent external genitalia | 2.16e-12 | 17 |
indifferent gonad | 2.16e-12 | 17 |
gonad | 9.91e-12 | 18 |
gonad primordium | 9.91e-12 | 18 |
reproductive organ | 6.53e-09 | 24 |
reproductive structure | 2.94e-08 | 26 |
reproductive system | 2.94e-08 | 26 |