Personal tools

FFCP PHASE1:Mm9::chr8:112089592..112089603,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=64340|HGNC=|MCL_coexpression_id=163|UniProt=Q80X98|association_with_transcript=-91bp_to_ENSMUST00000042601,NM_178380,uc009nij.1,uc009nik.1,uc009nil.1_5end|description=CAGE_peak_4_at_Dhx38_5end|id=chr8:112089592..112089603,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,5.13e-08,6;CL:0000677,5.13e-08,6;CL:0000584,5.13e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.39e-08,31;UBERON:0000344,4.74e-08,15|phase1_expression=0.480446541314382,6.63053274514786,5.0049916332849,2.41971369045464,3.00537437967808,3.02182689441402,2.33612640595526,0.903863264091034,0.84473233291,1.17032263160997,0,0.717949430958028,0.513602189793617,0.699363219351979,0.333109761815663,1.61980213911861,0,0.157731082679119,0,0.42438965179803,0.255129870453209,0.695036658406197,0.261199789138935,1.75991665072747,2.2940928106717,6.89078356938024,3.01533397311352,3.44753972297422,1.90023419456374,0.756090389279792,1.55211357458713,1.27006134691926,2.46025915033828,0,0.577703239502549,0.498703936075477,0.612508068787107,8.78916424547506,3.1253413780952,6.80580867165938,9.41170380849623,10.9287277593351,4.85510353031154,0.629484089877886,0.709638518536602,0.367093504323363,0,0.218025156380447,0.219686182734472,0.777719596297134,0.139986421625363,0,1.00669563634642,0,1.00828139742739,1.54355661621568,1.14613375975503,0,0.202316460859598,0,0,0,0,0.899899717281399,1.97773272513395,0.7104801149461,0.599200221036809,0,0.311068836925433,0.405017814995072,0.630974884054146,0,0.220868540951614,0.244981598429908,0.670918297127655,0,0,0.383062014255563,0,0.263772575460388,0.640413505216868,0.52091337055676,0.279182999001381,0,0.15279824777681,0.294628585473668,0,0.372798891650601,1.28734528666413,1.13357340160178,2.31891590961342,0.860423876981386,1.3599426674155,0,0.649776417447669,0.448026887097336,0.702222100658759,0.852151612890289,1.29893002301434,0,0,0,0,0,0.216491041011214,1.52015919285059,1.51657333504435,1.1418387971906,1.55362730188303,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.60289056221049,0.352766121407114,0.376999773989026,0.494389935468748,0,2.65383165584962,0,0.441683036920787,0,0,0.292780797011547,0,2.04365644166873,1.31796636956512,3.59941638596045,2.41433431438823,0.149790639404823,0,0.251308704225729,0.173824320192276,0.255715457330331,0.20778804455956,0.486723789203273,0.712875546952214,0.622034853050465,0,0,0.260240885925407,0.459804208866946,0.360124259610698,0,0.340182495756639,0.512454881139399,0.374806898238915,0.776110112217047,1.29340795759705,1.89106080167819,0.175951124163949,0.219195732427575,0.834141747676794,0.348252166522167,0.411564272815887,0.199034266818493,1.40442637462647,2.05878325691772,1.98914449576915,0,0,0.720248245844059,0.23674473558521,0.787056926989615,0.462801338662135,0.465067889500816,0,0.116765342367169,0.16455984991348,0.492502392237286,0.162137619091711,0.146199987425332,0,0.268412837520744,0,0.720332286654991,2.31293148088659,2.3800550999719,0.639864751605702,0.232236671860439,0.257734922644187,1.00841762311671,1.11189021922435,0.380451252225118,1.42358718463353,1.31759163779209,2.01068167040216,1.1937388322469,1.55971269695296,0.898819408654221,0.648414149624083,1.39398891278057,0.569003702859245,1.02823661348756,0,1.22190796707189,0.193952487167626,0.561086559122548,0.379419222745544,0.295220295959204,0.470996183524124,0,0.889357881261447,1.16791574001266,1.57247196090562,0.674586337154561,0.405720242777006,0.964708639009667,0.763877555344259,0.863088412352432,1.94562272130042,2.47105271869273,2.87536413054709,1.48856379067401,1.24815069245824,1.51547326768267,1.4351793081753,0,0.369506380333209,0.947457058852424,0.814824882210129,0.509235257325564,0.938760993154008,0.502518772325447,0.476087281772027,0.780534591431195,1.10344600874334,1.32878813789265,0.159454768657487,0.327726629431476,0,0.289298117163023,0,2.71952841909355,1.96705709207614,0.827810238914197,0,0.234423373184406,0.819674726883377,0.504941854408746,0.631016438832513,0.780877488593277,0.861693590931196,0.955875191810208,1.11399337041197,1.13230612315533,0,0.292255857911312,0.790575555893047,0,0.283880170416537,0.178065603667255,0.488660878060728,0,0,0.485561272309963,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,0,0.720244376125241,0.905510786479282,0.428674070063185,0.709360934569094,0.356737635204141,0.493647061806363,0,0.938686832254841,0.42366414172764,0,1.6488625294148,0.322928853391811,0.663442174209714,0.238744688006273,0.492422699235184,0.582961673259701,0,0.512612642393558,0.82554747185289,0.555583582109135,1.31857919903284,2.32380187125743,0.457556346413045,1.35982743995084,1.81936888020755,0.690999869022119,0.954670618015114,1.10717597753397,0.203319467126849,0.756037385752609,0,0.218362563746178,0.539457385539283,0.495920734352016,0.785267825952089,0.648074866458964,0.621339313086926,0,0.299033092087958,0.992750942742586,1.36115831840833,0.774958940866387,1.01373675294467,1.29092962510329,1.0416350787516,0.524296722128554,0,0,0.316011120628178,0.405450430580328,0.410843828659309,0.77952493786677,0.895133478337407,0.596044064343795,0.360586348559907,0.738447635872886,0.504832249740738,0.914481679859998,0.705783295957884,0.682205165178267,0.577271049841977,0.818138315270983,0.453460767230423,1.55390167361845,4.30626511725483,1.67884616364078,0,0.93841237725591,0.549454872801795,0.643105137237198,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.830298780673413,0,1.02440163452481,0.243106717068294,1.04806581313991,0.183843508450014,0.888986911206461,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.320125762024346,0.402048282689293,0.476293691283074,0.231768651889711,0,0.412085900803307,0.588795680537589,0,1.06485483695602,1.1921809497366,0.581385666529314,0.376437521661322,0.592302255241736,1.09756783723664,0.263069711437843,0.679020569229309,0.561142271657738,0.830445126869219,0.394017929502254,0.818462086339379,0.77468420592983,0.578719832943424,0.249810577937946,0.233931608445408,0.644613162144895,0.57386499620653,0,0.695603506861264|short_description=p4@Dhx38}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:64340
|HGNC=
|MCL_coexpression_id=163
|TSSclassifier=NA
|UniProt=uniprot:Q80X98
|association_with_transcript=-91bp_to_ENSMUST00000042601,NM_178380,uc009nij.1,uc009nik.1,uc009nil.1_5end
|cluster_id=chr8:112089592..112089603,-
|description=CAGE_peak_4_at_Dhx38_5end
|id=chr8:112089592..112089603,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000239,5.13e-08,6;CL:0000677,5.13e-08,6;CL:0000584,5.13e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.39e-08,31;UBERON:0000344,4.74e-08,15
|phase1_expression=0.480446541314382,6.63053274514786,5.0049916332849,2.41971369045464,3.00537437967808,3.02182689441402,2.33612640595526,0.903863264091034,0.84473233291,1.17032263160997,0,0.717949430958028,0.513602189793617,0.699363219351979,0.333109761815663,1.61980213911861,0,0.157731082679119,0,0.42438965179803,0.255129870453209,0.695036658406197,0.261199789138935,1.75991665072747,2.2940928106717,6.89078356938024,3.01533397311352,3.44753972297422,1.90023419456374,0.756090389279792,1.55211357458713,1.27006134691926,2.46025915033828,0,0.577703239502549,0.498703936075477,0.612508068787107,8.78916424547506,3.1253413780952,6.80580867165938,9.41170380849623,10.9287277593351,4.85510353031154,0.629484089877886,0.709638518536602,0.367093504323363,0,0.218025156380447,0.219686182734472,0.777719596297134,0.139986421625363,0,1.00669563634642,0,1.00828139742739,1.54355661621568,1.14613375975503,0,0.202316460859598,0,0,0,0,0.899899717281399,1.97773272513395,0.7104801149461,0.599200221036809,0,0.311068836925433,0.405017814995072,0.630974884054146,0,0.220868540951614,0.244981598429908,0.670918297127655,0,0,0.383062014255563,0,0.263772575460388,0.640413505216868,0.52091337055676,0.279182999001381,0,0.15279824777681,0.294628585473668,0,0.372798891650601,1.28734528666413,1.13357340160178,2.31891590961342,0.860423876981386,1.3599426674155,0,0.649776417447669,0.448026887097336,0.702222100658759,0.852151612890289,1.29893002301434,0,0,0,0,0,0.216491041011214,1.52015919285059,1.51657333504435,1.1418387971906,1.55362730188303,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.60289056221049,0.352766121407114,0.376999773989026,0.494389935468748,0,2.65383165584962,0,0.441683036920787,0,0,0.292780797011547,0,2.04365644166873,1.31796636956512,3.59941638596045,2.41433431438823,0.149790639404823,0,0.251308704225729,0.173824320192276,0.255715457330331,0.20778804455956,0.486723789203273,0.712875546952214,0.622034853050465,0,0,0.260240885925407,0.459804208866946,0.360124259610698,0,0.340182495756639,0.512454881139399,0.374806898238915,0.776110112217047,1.29340795759705,1.89106080167819,0.175951124163949,0.219195732427575,0.834141747676794,0.348252166522167,0.411564272815887,0.199034266818493,1.40442637462647,2.05878325691772,1.98914449576915,0,0,0.720248245844059,0.23674473558521,0.787056926989615,0.462801338662135,0.465067889500816,0,0.116765342367169,0.16455984991348,0.492502392237286,0.162137619091711,0.146199987425332,0,0.268412837520744,0,0.720332286654991,2.31293148088659,2.3800550999719,0.639864751605702,0.232236671860439,0.257734922644187,1.00841762311671,1.11189021922435,0.380451252225118,1.42358718463353,1.31759163779209,2.01068167040216,1.1937388322469,1.55971269695296,0.898819408654221,0.648414149624083,1.39398891278057,0.569003702859245,1.02823661348756,0,1.22190796707189,0.193952487167626,0.561086559122548,0.379419222745544,0.295220295959204,0.470996183524124,0,0.889357881261447,1.16791574001266,1.57247196090562,0.674586337154561,0.405720242777006,0.964708639009667,0.763877555344259,0.863088412352432,1.94562272130042,2.47105271869273,2.87536413054709,1.48856379067401,1.24815069245824,1.51547326768267,1.4351793081753,0,0.369506380333209,0.947457058852424,0.814824882210129,0.509235257325564,0.938760993154008,0.502518772325447,0.476087281772027,0.780534591431195,1.10344600874334,1.32878813789265,0.159454768657487,0.327726629431476,0,0.289298117163023,0,2.71952841909355,1.96705709207614,0.827810238914197,0,0.234423373184406,0.819674726883377,0.504941854408746,0.631016438832513,0.780877488593277,0.861693590931196,0.955875191810208,1.11399337041197,1.13230612315533,0,0.292255857911312,0.790575555893047,0,0.283880170416537,0.178065603667255,0.488660878060728,0,0,0.485561272309963,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0,0,0,0,0,0.720244376125241,0.905510786479282,0.428674070063185,0.709360934569094,0.356737635204141,0.493647061806363,0,0.938686832254841,0.42366414172764,0,1.6488625294148,0.322928853391811,0.663442174209714,0.238744688006273,0.492422699235184,0.582961673259701,0,0.512612642393558,0.82554747185289,0.555583582109135,1.31857919903284,2.32380187125743,0.457556346413045,1.35982743995084,1.81936888020755,0.690999869022119,0.954670618015114,1.10717597753397,0.203319467126849,0.756037385752609,0,0.218362563746178,0.539457385539283,0.495920734352016,0.785267825952089,0.648074866458964,0.621339313086926,0,0.299033092087958,0.992750942742586,1.36115831840833,0.774958940866387,1.01373675294467,1.29092962510329,1.0416350787516,0.524296722128554,0,0,0.316011120628178,0.405450430580328,0.410843828659309,0.77952493786677,0.895133478337407,0.596044064343795,0.360586348559907,0.738447635872886,0.504832249740738,0.914481679859998,0.705783295957884,0.682205165178267,0.577271049841977,0.818138315270983,0.453460767230423,1.55390167361845,4.30626511725483,1.67884616364078,0,0.93841237725591,0.549454872801795,0.643105137237198,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0.830298780673413,0,1.02440163452481,0.243106717068294,1.04806581313991,0.183843508450014,0.888986911206461,0.206035057238894,0,0.252697211763798,0.25347929989024,0.188626341386076,0.280924522409647,0.320125762024346,0.402048282689293,0.476293691283074,0.231768651889711,0,0.412085900803307,0.588795680537589,0,1.06485483695602,1.1921809497366,0.581385666529314,0.376437521661322,0.592302255241736,1.09756783723664,0.263069711437843,0.679020569229309,0.561142271657738,0.830445126869219,0.394017929502254,0.818462086339379,0.77468420592983,0.578719832943424,0.249810577937946,0.233931608445408,0.644613162144895,0.57386499620653,0,0.695603506861264
|short_description=p4@Dhx38
}}

Revision as of 21:37, 5 August 2015

Short description:p4@Dhx38
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Dhx38_5end
Coexpression cluster:MCL_coexpression_mm9:163
Association with transcript: -91bp_to_ENSMUST00000042601, NM_178380, uc009nij.1, uc009nik.1, uc009nil.1_5end
EntrezGene:64340
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Dhx38

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I56.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.42
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.34
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.72
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I23.45
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.55
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G62.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H36.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G99.41
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.01
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.64
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D91.29
Mouse Schwann, donor2.CNhs12573.11746-123F91.13
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H72.04
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.32
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D42.41
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E21.29
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A32.38
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.11
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E91.32
intestine, neonate N06.CNhs11102.688-20B82.01
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H61.57
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.76
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G22.47
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A31.52
liver, neonate N25.CNhs11198.1368-26H11.44
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E51.10
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.82
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.94
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C31.65
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H12.32
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.99
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G51.01
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A20.68
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.31
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.40
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
brush border epithelial cell5.13e-086
gut absorptive cell5.13e-086
enterocyte5.13e-086

Uber anatomy
Ontology termp-valuen
intestine3.39e-0831
mucosa4.74e-0815
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr8:112089592..112089603,-&oldid=3944603"