FFCP PHASE1:Mm9::chr6:52134126..52134150,-: Difference between revisions
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{{FFCP|EntrezGene=15400|HGNC=|MCL_coexpression_id=579|UniProt=D3YV38|association_with_transcript=-272bp_to_ENSMUST00000134831_5end|description=CAGE_peak_3_at_Hoxa3_5end|id=chr6:52134126..52134150,-|ontology_enrichment_celltype=CL:0000107!3.37e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,1.28e-35,9;CL:0000540,1.10e-09,33;CL:0000047,1.10e-09,33;CL:0000031,1.10e-09,33;CL:0000404,1.10e-09,33;CL:0000393,3.60e-08,39;CL:0000211,3.60e-08,39;CL:0002319,2.16e-07,43;CL:0000221,3.22e-07,44;CL:0000133,3.22e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!3.37e-07!9;UBERON:0000010!3.71e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.28e-35,9;UBERON:0000010,3.65e-29,11;UBERON:0010313,7.38e-28,3;UBERON:0002342,7.38e-28,3;UBERON:0002005,7.38e-28,3;UBERON:0005428,7.38e-28,3;UBERON:0005062,7.38e-28,3;UBERON:0000013,4.66e-27,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0.853153002140936,1.16118335930219,1.03093969057675,0.403367049246685,0.889512175379481,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.339490171550376,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.963303539926752,0.703270119553219,0,0,6.94118082715765,12.4940398174924,10.1248996934415,0,0,0,5.26253912177363,2.04579100537918,4.74345333535828,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.432021363287205,0.627264888043406,0.436725127492355,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p3@Hoxa3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:15400 | |||
|HGNC= | |||
|MCL_coexpression_id=579 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YV38 | |||
|association_with_transcript=-272bp_to_ENSMUST00000134831_5end | |||
|cluster_id=chr6:52134126..52134150,- | |||
|description=CAGE_peak_3_at_Hoxa3_5end | |||
|id=chr6:52134126..52134150,- | |||
|ontology_enrichment_celltype=CL:0000107!3.37e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.28e-35,9;CL:0000540,1.10e-09,33;CL:0000047,1.10e-09,33;CL:0000031,1.10e-09,33;CL:0000404,1.10e-09,33;CL:0000393,3.60e-08,39;CL:0000211,3.60e-08,39;CL:0002319,2.16e-07,43;CL:0000221,3.22e-07,44;CL:0000133,3.22e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!3.37e-07!9;UBERON:0000010!3.71e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.28e-35,9;UBERON:0000010,3.65e-29,11;UBERON:0010313,7.38e-28,3;UBERON:0002342,7.38e-28,3;UBERON:0002005,7.38e-28,3;UBERON:0005428,7.38e-28,3;UBERON:0005062,7.38e-28,3;UBERON:0000013,4.66e-27,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0.189106080167819,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0.853153002140936,1.16118335930219,1.03093969057675,0.403367049246685,0.889512175379481,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.339490171550376,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0.963303539926752,0.703270119553219,0,0,6.94118082715765,12.4940398174924,10.1248996934415,0,0,0,5.26253912177363,2.04579100537918,4.74345333535828,0,0,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.432021363287205,0.627264888043406,0.436725127492355,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0,0,0,0.320919209591815,0,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0.188218760830661,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p3@Hoxa3 | |||
}} |
Revision as of 22:28, 5 August 2015
Short description: | p3@Hoxa3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Hoxa3_5end |
Coexpression cluster: | MCL_coexpression_mm9:579 |
Association with transcript: | -272bp_to_ENSMUST00000134831_5end |
EntrezGene: | 15400 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.28e-35 | 9 |
neuron | 1.10e-09 | 33 |
neuronal stem cell | 1.10e-09 | 33 |
neuroblast | 1.10e-09 | 33 |
electrically signaling cell | 1.10e-09 | 33 |
electrically responsive cell | 3.60e-08 | 39 |
electrically active cell | 3.60e-08 | 39 |
neural cell | 2.16e-07 | 43 |
ectodermal cell | 3.22e-07 | 44 |
neurectodermal cell | 3.22e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.28e-35 | 9 |
peripheral nervous system | 3.65e-29 | 11 |
neural crest-derived structure | 7.38e-28 | 3 |
neural crest | 7.38e-28 | 3 |
enteric nervous system | 7.38e-28 | 3 |
vagal neural crest | 7.38e-28 | 3 |
neural fold | 7.38e-28 | 3 |
sympathetic nervous system | 4.66e-27 | 3 |