FFCP PHASE1:Mm9::chr3:128918433..128918448,+: Difference between revisions
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{{FFCP|EntrezGene=18741|HGNC=|MCL_coexpression_id=395|UniProt=G3UZS8|association_with_transcript=0bp_to_ENSMUST00000172751_5end|description=CAGE_peak_8_at_Pitx2_5end|id=chr3:128918433..128918448,+|ontology_enrichment_celltype=CL:0002563!8.56e-11!9;CL:0002251!8.56e-11!9;CL:0000239!2.26e-07!6;CL:0000677!2.26e-07!6;CL:0000212!2.26e-07!6;CL:0000584!2.26e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,2.15e-17,9;CL:0002251,2.15e-17,9;CL:0002250,4.86e-11,3;CL:0002076,4.59e-10,15;CL:0000066,3.14e-09,25;CL:0000239,7.78e-09,6;CL:0000677,7.78e-09,6;CL:0000584,7.78e-09,6;CL:0000075,1.40e-07,7;CL:0000223,2.59e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!2.61e-17!15;UBERON:0000160!1.26e-15!43;UBERON:0001242!2.64e-15!13;UBERON:0000060!2.64e-15!13;UBERON:0001262!2.64e-15!13;UBERON:0004786!2.64e-15!13;UBERON:0005409!3.06e-13!59;UBERON:0004923!3.17e-11!24;UBERON:0003350!8.56e-11!9;UBERON:0004808!8.56e-11!9;UBERON:0001277!8.56e-11!9;UBERON:0000485!2.51e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.64e-30,15;UBERON:0000160,5.03e-28,31;UBERON:0001242,1.26e-24,13;UBERON:0001262,1.26e-24,13;UBERON:0004786,1.26e-24,13;UBERON:0005409,2.04e-19,47;UBERON:0004923,7.54e-18,24;UBERON:0003350,2.15e-17,9;UBERON:0004808,2.15e-17,9;UBERON:0001277,2.15e-17,9;UBERON:0002108,1.91e-14,4;UBERON:0000485,4.59e-14,11;UBERON:0000331,1.79e-11,3;UBERON:0002116,1.79e-11,3;UBERON:0001204,1.79e-11,3;UBERON:0001168,1.79e-11,3;UBERON:0001007,1.88e-09,116;UBERON:0001555,1.88e-09,116;UBERON:0007026,1.88e-09,116;UBERON:0004119,3.23e-09,118;UBERON:0000925,3.23e-09,118;UBERON:0006595,3.23e-09,118;UBERON:0004921,1.25e-07,114;UBERON:0001962,5.42e-07,2;UBERON:0001961,5.42e-07,2;UBERON:0001744,5.42e-07,2|phase1_expression=0,0.697950815278722,1.36499771816861,0.60492842261366,3.00537437967808,2.51818907867835,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.11994695955385,1.83527424853736,1.14846392823004,0.86152399231815,3.66301095566011,9.12112413390595,7.30887376303799,3.99114919179548,0,0,0,5.77703239502549,2.99222361645286,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0.395658863190582,0.182975287204819,0.52091337055676,0,2.25105044012672,1.22238598221448,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0.173485326766136,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,4.08731288333746,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0.520481771850815,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0,0.154267112887378,0.465067889500816,0.536546802799238,0.233530684734339,0.329119699826961,0.32833492815819,0,0.146199987425332,0,0,0,0,0.991256348951394,3.70230793328962,0,0.464473343720877,0,0.605050573870028,0.22237804384487,0.380451252225118,1.42358718463353,0.658795818896044,0.754005626400808,0.795825888164603,0.779856348476481,4.49409704327111,1.08069024937347,1.99141273254367,0,0,0,0,0,0,0,0,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0.388076051348264,0.643011105094777,0.886701168211368,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,2.91480836629851,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0.276399947608848,0,0.474503990371703,0,0,0,0,0,0.0826534557253359,0.26175594198403,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0.167884616364078,1.73870634628971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p8@Pitx2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18741 | |||
|HGNC= | |||
|MCL_coexpression_id=395 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:G3UZS8 | |||
|association_with_transcript=0bp_to_ENSMUST00000172751_5end | |||
|cluster_id=chr3:128918433..128918448,+ | |||
|description=CAGE_peak_8_at_Pitx2_5end | |||
|id=chr3:128918433..128918448,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.56e-11!9;CL:0002251!8.56e-11!9;CL:0000239!2.26e-07!6;CL:0000677!2.26e-07!6;CL:0000212!2.26e-07!6;CL:0000584!2.26e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.15e-17,9;CL:0002251,2.15e-17,9;CL:0002250,4.86e-11,3;CL:0002076,4.59e-10,15;CL:0000066,3.14e-09,25;CL:0000239,7.78e-09,6;CL:0000677,7.78e-09,6;CL:0000584,7.78e-09,6;CL:0000075,1.40e-07,7;CL:0000223,2.59e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!2.61e-17!15;UBERON:0000160!1.26e-15!43;UBERON:0001242!2.64e-15!13;UBERON:0000060!2.64e-15!13;UBERON:0001262!2.64e-15!13;UBERON:0004786!2.64e-15!13;UBERON:0005409!3.06e-13!59;UBERON:0004923!3.17e-11!24;UBERON:0003350!8.56e-11!9;UBERON:0004808!8.56e-11!9;UBERON:0001277!8.56e-11!9;UBERON:0000485!2.51e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.64e-30,15;UBERON:0000160,5.03e-28,31;UBERON:0001242,1.26e-24,13;UBERON:0001262,1.26e-24,13;UBERON:0004786,1.26e-24,13;UBERON:0005409,2.04e-19,47;UBERON:0004923,7.54e-18,24;UBERON:0003350,2.15e-17,9;UBERON:0004808,2.15e-17,9;UBERON:0001277,2.15e-17,9;UBERON:0002108,1.91e-14,4;UBERON:0000485,4.59e-14,11;UBERON:0000331,1.79e-11,3;UBERON:0002116,1.79e-11,3;UBERON:0001204,1.79e-11,3;UBERON:0001168,1.79e-11,3;UBERON:0001007,1.88e-09,116;UBERON:0001555,1.88e-09,116;UBERON:0007026,1.88e-09,116;UBERON:0004119,3.23e-09,118;UBERON:0000925,3.23e-09,118;UBERON:0006595,3.23e-09,118;UBERON:0004921,1.25e-07,114;UBERON:0001962,5.42e-07,2;UBERON:0001961,5.42e-07,2;UBERON:0001744,5.42e-07,2 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,0.60492842261366,3.00537437967808,2.51818907867835,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,1.11994695955385,1.83527424853736,1.14846392823004,0.86152399231815,3.66301095566011,9.12112413390595,7.30887376303799,3.99114919179548,0,0,0,5.77703239502549,2.99222361645286,3.67504841272264,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.307213066512487,0.395658863190582,0.182975287204819,0.52091337055676,0,2.25105044012672,1.22238598221448,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.48439043634778,0,0,0.173485326766136,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0,4.08731288333746,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0.520481771850815,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0.207125772535502,0.469052119962192,0.180062061461015,0.23674473558521,0,0.154267112887378,0.465067889500816,0.536546802799238,0.233530684734339,0.329119699826961,0.32833492815819,0,0.146199987425332,0,0,0,0,0.991256348951394,3.70230793328962,0,0.464473343720877,0,0.605050573870028,0.22237804384487,0.380451252225118,1.42358718463353,0.658795818896044,0.754005626400808,0.795825888164603,0.779856348476481,4.49409704327111,1.08069024937347,1.99141273254367,0,0,0,0,0,0,0,0,0,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0.18006109403131,0.388076051348264,0.643011105094777,0.886701168211368,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,2.91480836629851,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0.139951452323658,0.276399947608848,0,0.474503990371703,0,0,0,0,0,0.0826534557253359,0.26175594198403,1.03691978633434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36038230169127,0,0,0.167884616364078,1.73870634628971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0,0.409231043169689,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p8@Pitx2 | |||
}} |
Revision as of 00:36, 6 August 2015
Short description: | p8@Pitx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Pitx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:395 |
Association with transcript: | 0bp_to_ENSMUST00000172751_5end |
EntrezGene: | 18741 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.15e-17 | 9 |
epithelial cell of alimentary canal | 2.15e-17 | 9 |
intestinal crypt stem cell | 4.86e-11 | 3 |
endo-epithelial cell | 4.59e-10 | 15 |
epithelial cell | 3.14e-09 | 25 |
brush border epithelial cell | 7.78e-09 | 6 |
gut absorptive cell | 7.78e-09 | 6 |
enterocyte | 7.78e-09 | 6 |
columnar/cuboidal epithelial cell | 1.40e-07 | 7 |
endodermal cell | 2.59e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.64e-30 | 15 |
intestine | 5.03e-28 | 31 |
intestinal mucosa | 1.26e-24 | 13 |
wall of intestine | 1.26e-24 | 13 |
gastrointestinal system mucosa | 1.26e-24 | 13 |
gastrointestinal system | 2.04e-19 | 47 |
organ component layer | 7.54e-18 | 24 |
epithelium of mucosa | 2.15e-17 | 9 |
gastrointestinal system epithelium | 2.15e-17 | 9 |
intestinal epithelium | 2.15e-17 | 9 |
small intestine | 1.91e-14 | 4 |
simple columnar epithelium | 4.59e-14 | 11 |
ileal mucosa | 1.79e-11 | 3 |
ileum | 1.79e-11 | 3 |
mucosa of small intestine | 1.79e-11 | 3 |
wall of small intestine | 1.79e-11 | 3 |
digestive system | 1.88e-09 | 116 |
digestive tract | 1.88e-09 | 116 |
primitive gut | 1.88e-09 | 116 |
endoderm-derived structure | 3.23e-09 | 118 |
endoderm | 3.23e-09 | 118 |
presumptive endoderm | 3.23e-09 | 118 |
subdivision of digestive tract | 1.25e-07 | 114 |
gut-associated lymphoid tissue | 5.42e-07 | 2 |
mucosa-associated lymphoid tissue | 5.42e-07 | 2 |
lymphoid tissue | 5.42e-07 | 2 |