FFCP PHASE1:Mm9::chr16:13903108..13903128,-: Difference between revisions
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{{FFCP|EntrezGene=94184|HGNC=|UniProt=Q99K01|association_with_transcript=0bp_to_ENSMUST00000115804_5end|description=CAGE_peak_5_at_Pdxdc1_5end|id=chr16:13903108..13903128,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!9.86e-10!122;UBERON:0000468!1.68e-09!333;UBERON:0000922!4.22e-08!328;UBERON:0000955!1.62e-07!50;UBERON:0006238!1.62e-07!50;UBERON:0002616!1.83e-07!49;UBERON:0000025!2.79e-07!114;UBERON:0002021!2.92e-07!10;UBERON:0000411!2.92e-07!10;UBERON:0001950!2.92e-07!10;UBERON:0001049!9.41e-07!52;UBERON:0005068!9.41e-07!52;UBERON:0006241!9.41e-07!52;UBERON:0007135!9.41e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0004111,9.87e-10,122;UBERON:0000025,2.79e-07,114;UBERON:0002021,2.92e-07,10;UBERON:0000411,2.92e-07,10;UBERON:0001950,2.92e-07,10;UBERON:0000073,3.00e-07,54;UBERON:0001049,9.43e-07,52;UBERON:0005068,9.43e-07,52;UBERON:0006241,9.43e-07,52;UBERON:0007135,9.43e-07,52|phase1_expression=5.44506080156299,4.88565570695105,6.3699893514535,4.53696316960245,3.50627010962443,6.37941233265181,3.50418960893289,3.09895976259783,3.23814060948833,1.63845168425395,2.91070545983358,2.71225340584144,2.05440875917447,2.36035086531293,1.66554880907831,3.23960427823721,1.39912375625629,2.05050407482854,3.15363197293199,2.12194825899015,3.31668831589172,1.19149141441062,0.783599367416806,3.51983330145495,3.21172993494038,4.59385571292016,3.01533397311352,4.74036711908956,4.56056206695297,5.79669298447841,1.77384408524244,1.27006134691926,2.46025915033828,0,4.91047753577167,4.48833542467929,3.87921776898501,1.67412652294763,1.5626706890476,3.14114246384279,1.17646297606203,1.36609096991689,0.485510353031154,5.28766635497425,5.67710814829281,2.38610777810186,2.34717403304412,1.52617609466313,0.659058548203415,5.05517737593137,3.3596741190087,2.87505128729943,2.34895648480831,2.90144856804538,2.35265659399725,3.60163210450326,5.73066879877513,5.15672092277442,1.41621522601718,3.1739458756322,1.90149421051854,3.38844532069132,0.889294796111139,0,0.988866362566974,1.4209602298922,0.898800331555214,0.768436610643109,3.42175720617976,3.10513658162888,3.57552434297349,3.99911378165325,4.41737081903227,5.38959516545798,4.2172007248024,3.67687514644008,4.40463523997555,9.44886301830389,7.68032666281217,3.42904348098504,3.20206752608434,5.73004707612436,5.02529398202486,9.00420176050688,7.63991238884051,4.12480019663135,5.83723891276322,4.10078780815661,3.48340489332647,3.6274348851257,5.2175607966302,8.60423876981386,5.439770669662,4.85732872474035,7.14754059192436,8.51251085484938,4.49422144421606,2.21559419351475,1.03914401841148,4.59341446863442,5.91542363062058,3.84979432242953,15.2883143823987,0,3.46385665617943,2.78695852022608,1.51657333504435,3.65388415100992,3.10725460376606,5.78924342352817,4.68410382268567,4.26251669636998,4.15107895060905,3.46662073271032,3.29248379979973,4.52399728786832,7.66304399976559,5.06097749219691,0.884610551949874,3.07357014900077,3.3126227769059,4.363877278217,5.59175283654366,5.85561594023094,7.12118803165747,4.59822699375465,1.43778149407104,0,0.762421362438388,5.54225365797844,8.6925114535539,5.52879149296603,5.21472960576829,6.64860189058859,3.94797284663164,6.48965052271031,5.09196819251581,5.10068579501381,8.59257378674494,4.8401626853889,1.43132487258974,3.90833577536904,3.42118046630164,3.61691562805716,3.60593445502038,2.94661556655154,2.62364828767241,3.62184719034622,2.15567992932842,3.21480336285293,4.92663147659057,5.91828477554452,6.11703948296315,8.00979983000983,6.37924622864625,5.9710280045548,0,1.02939162845886,0.568326998791185,2.07125772535502,1.64168241986767,4.50155153652537,5.68187365404505,4.13204886669548,4.62801338662135,3.25547522650571,5.09719462659276,4.2035523252181,3.78487654801005,3.61168420974009,5.26947262048062,4.38599962275997,4.39100230582101,6.03928884421673,5.46753866266731,4.01327988279209,3.96502539580558,5.02456076660734,4.90562976231038,5.34144345279009,3.22168653305233,4.43703754171354,4.22518283305254,7.03834816616469,3.79623249235609,6.0938613247884,4.77536896720512,5.57078121715222,4.67913809085888,5.39291645192533,6.05186539649144,6.57166201739412,3.79335801906163,2.85621281524322,1.1270773567308,4.68398054044223,3.10323979468201,3.99774173374816,3.85742876457969,3.69025369949005,3.45397201251025,4.56569506510662,5.03969466048153,1.66845105716094,2.35870794135844,2.24862112384854,2.23146133527353,4.3411888755435,3.31013607315846,2.87696137450811,3.72911021582581,3.84385978463314,8.62609239164127,4.09355042435354,4.05648975048929,5.30415643688935,4.30553792452589,5.30687873499704,5.54259570499814,3.60033682363921,3.09633455239849,5.26209765903083,3.05097322775053,3.85264392116176,4.52282917683426,3.90267295715598,5.35959489961049,4.65075848262427,7.17546458958692,4.42430949732493,4.83517949224508,5.35201516751593,0,2.71952841909355,4.42587845717133,3.03530420935206,7.38532713943843,5.86058432961016,4.91804836130026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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:94184 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99K01 | |||
|association_with_transcript=0bp_to_ENSMUST00000115804_5end | |||
|cluster_id=chr16:13903108..13903128,- | |||
|description=CAGE_peak_5_at_Pdxdc1_5end | |||
|id=chr16:13903108..13903128,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!9.86e-10!122;UBERON:0000468!1.68e-09!333;UBERON:0000922!4.22e-08!328;UBERON:0000955!1.62e-07!50;UBERON:0006238!1.62e-07!50;UBERON:0002616!1.83e-07!49;UBERON:0000025!2.79e-07!114;UBERON:0002021!2.92e-07!10;UBERON:0000411!2.92e-07!10;UBERON:0001950!2.92e-07!10;UBERON:0001049!9.41e-07!52;UBERON:0005068!9.41e-07!52;UBERON:0006241!9.41e-07!52;UBERON:0007135!9.41e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,9.87e-10,122;UBERON:0000025,2.79e-07,114;UBERON:0002021,2.92e-07,10;UBERON:0000411,2.92e-07,10;UBERON:0001950,2.92e-07,10;UBERON:0000073,3.00e-07,54;UBERON:0001049,9.43e-07,52;UBERON:0005068,9.43e-07,52;UBERON:0006241,9.43e-07,52;UBERON:0007135,9.43e-07,52 | |||
|phase1_expression=5.44506080156299,4.88565570695105,6.3699893514535,4.53696316960245,3.50627010962443,6.37941233265181,3.50418960893289,3.09895976259783,3.23814060948833,1.63845168425395,2.91070545983358,2.71225340584144,2.05440875917447,2.36035086531293,1.66554880907831,3.23960427823721,1.39912375625629,2.05050407482854,3.15363197293199,2.12194825899015,3.31668831589172,1.19149141441062,0.783599367416806,3.51983330145495,3.21172993494038,4.59385571292016,3.01533397311352,4.74036711908956,4.56056206695297,5.79669298447841,1.77384408524244,1.27006134691926,2.46025915033828,0,4.91047753577167,4.48833542467929,3.87921776898501,1.67412652294763,1.5626706890476,3.14114246384279,1.17646297606203,1.36609096991689,0.485510353031154,5.28766635497425,5.67710814829281,2.38610777810186,2.34717403304412,1.52617609466313,0.659058548203415,5.05517737593137,3.3596741190087,2.87505128729943,2.34895648480831,2.90144856804538,2.35265659399725,3.60163210450326,5.73066879877513,5.15672092277442,1.41621522601718,3.1739458756322,1.90149421051854,3.38844532069132,0.889294796111139,0,0.988866362566974,1.4209602298922,0.898800331555214,0.768436610643109,3.42175720617976,3.10513658162888,3.57552434297349,3.99911378165325,4.41737081903227,5.38959516545798,4.2172007248024,3.67687514644008,4.40463523997555,9.44886301830389,7.68032666281217,3.42904348098504,3.20206752608434,5.73004707612436,5.02529398202486,9.00420176050688,7.63991238884051,4.12480019663135,5.83723891276322,4.10078780815661,3.48340489332647,3.6274348851257,5.2175607966302,8.60423876981386,5.439770669662,4.85732872474035,7.14754059192436,8.51251085484938,4.49422144421606,2.21559419351475,1.03914401841148,4.59341446863442,5.91542363062058,3.84979432242953,15.2883143823987,0,3.46385665617943,2.78695852022608,1.51657333504435,3.65388415100992,3.10725460376606,5.78924342352817,4.68410382268567,4.26251669636998,4.15107895060905,3.46662073271032,3.29248379979973,4.52399728786832,7.66304399976559,5.06097749219691,0.884610551949874,3.07357014900077,3.3126227769059,4.363877278217,5.59175283654366,5.85561594023094,7.12118803165747,4.59822699375465,1.43778149407104,0,0.762421362438388,5.54225365797844,8.6925114535539,5.52879149296603,5.21472960576829,6.64860189058859,3.94797284663164,6.48965052271031,5.09196819251581,5.10068579501381,8.59257378674494,4.8401626853889,1.43132487258974,3.90833577536904,3.42118046630164,3.61691562805716,3.60593445502038,2.94661556655154,2.62364828767241,3.62184719034622,2.15567992932842,3.21480336285293,4.92663147659057,5.91828477554452,6.11703948296315,8.00979983000983,6.37924622864625,5.9710280045548,0,1.02939162845886,0.568326998791185,2.07125772535502,1.64168241986767,4.50155153652537,5.68187365404505,4.13204886669548,4.62801338662135,3.25547522650571,5.09719462659276,4.2035523252181,3.78487654801005,3.61168420974009,5.26947262048062,4.38599962275997,4.39100230582101,6.03928884421673,5.46753866266731,4.01327988279209,3.96502539580558,5.02456076660734,4.90562976231038,5.34144345279009,3.22168653305233,4.43703754171354,4.22518283305254,7.03834816616469,3.79623249235609,6.0938613247884,4.77536896720512,5.57078121715222,4.67913809085888,5.39291645192533,6.05186539649144,6.57166201739412,3.79335801906163,2.85621281524322,1.1270773567308,4.68398054044223,3.10323979468201,3.99774173374816,3.85742876457969,3.69025369949005,3.45397201251025,4.56569506510662,5.03969466048153,1.66845105716094,2.35870794135844,2.24862112384854,2.23146133527353,4.3411888755435,3.31013607315846,2.87696137450811,3.72911021582581,3.84385978463314,8.62609239164127,4.09355042435354,4.05648975048929,5.30415643688935,4.30553792452589,5.30687873499704,5.54259570499814,3.60033682363921,3.09633455239849,5.26209765903083,3.05097322775053,3.85264392116176,4.52282917683426,3.90267295715598,5.35959489961049,4.65075848262427,7.17546458958692,4.42430949732493,4.83517949224508,5.35201516751593,0,2.71952841909355,4.42587845717133,3.03530420935206,7.38532713943843,5.86058432961016,4.91804836130026,2.27223834483936,4.10160685241134,3.12350995437311,3.66219776145758,2.86762557543062,2.89638276307112,2.26461224631066,4.85772842009873,2.63030272120181,3.55759000151871,4.81981974632711,4.25820255624806,4.98583690268315,7.00413925220377,6.43383479592888,18.5843193675948,5.34117399540959,3.93020624054176,6.97838795096823,7.38254732201932,6.7635732547664,3.10113951801865,4.72593848320757,6.41695281092498,9.16506598013866,4.21674434299995,8.25084345985495,9.53230896110606,5.221771726908,3.23396709456886,3.64372959553707,5.85222771019503,5.35106452806212,4.93647061806363,6.08929898229199,5.86679270159276,6.35496212591461,7.93902232997863,4.61681508236144,5.8127193610526,5.54878909339034,4.77489376012546,4.92422699235184,6.12109756922687,6.30446026835733,1.19609616558497,4.12773735926445,2.77791791054568,0.941842285023455,1.50363650493128,1.37266903923914,1.69978429993855,2.37917468950219,1.24379976423981,0,3.63786392618306,6.09958401380546,5.40026704109006,5.22720740036172,5.24070152990826,6.33862428008657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| |||
|short_description=p5@Pdxdc1 | |||
}} |
Revision as of 01:34, 6 August 2015
Short description: | p5@Pdxdc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Pdxdc1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000115804_5end |
EntrezGene: | 94184 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 9.87e-10 | 122 |
tube | 2.79e-07 | 114 |
occipital lobe | 2.92e-07 | 10 |
visual cortex | 2.92e-07 | 10 |
neocortex | 2.92e-07 | 10 |
regional part of nervous system | 3.00e-07 | 54 |
neural tube | 9.43e-07 | 52 |
neural rod | 9.43e-07 | 52 |
future spinal cord | 9.43e-07 | 52 |
neural keel | 9.43e-07 | 52 |